Adam B. Olshen - researchr alias

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Viewing Publication 1 - 10 from 10

2024

Torch-eCpG: a fast and scalable eQTM mapper for thousands of molecular phenotypes with graphical processing unitsKord M. Kober, Liam Berger, Ritu Roy, Adam B. Olshen. bmcbi, 25(1):71, December 2024. [doi]

2023

Does multi-way, long-range chromatin contact data advance 3D genome reconstruction?Adam B. Olshen, Mark R. Segal. bmcbi, 24(1):64, December 2023. [doi]

2013

Assessing gene-level translational control from ribosome profilingAdam B. Olshen, Andrew C. Hsieh, Craig R. Stumpf, Richard A. Olshen, Davide Ruggero, Barry S. Taylor. bioinformatics, 29(23):2995-3002, 2013. [doi]

2011

Parent-specific copy number in paired tumor-normal studies using circular binary segmentationAdam B. Olshen, Henrik Bengtsson, Pierre Neuvial, Paul T. Spellman, Richard A. Olshen, Venkatraman E. Seshan. bioinformatics, 27(15):2038-2046, 2011. [doi]

Clonality: an R package for testing clonal relatedness of two tumors from the same patient based on their genomic profilesIrina Ostrovnaya, Venkatraman E. Seshan, Adam B. Olshen, Colin B. Begg. bioinformatics, 27(12):1698-1699, 2011. [doi]

2010

A classification model for distinguishing copy number variants from cancer-related alterationsIrina Ostrovnaya, Gouri Nanjangud, Adam B. Olshen. bmcbi, 11:297, 2010. [doi]

Integrative clustering of multiple genomic data types using a joint latent variable model with application to breast and lung cancer subtype analysisRonglai Shen, Adam B. Olshen, Marc Ladanyi. bioinformatics, 26(2):292-293, 2010. [doi]

2009

Integrative clustering of multiple genomic data types using a joint latent variable model with application to breast and lung cancer subtype analysisRonglai Shen, Adam B. Olshen, Marc Ladanyi. bioinformatics, 25(22):2906-2912, 2009. [doi]

2007

A faster circular binary segmentation algorithm for the analysis of array CGH dataE. S. Venkatraman, Adam B. Olshen. bioinformatics, 23(6):657-663, 2007. [doi]

2002

Deriving quantitative conclusions from microarray expression dataAdam B. Olshen, Ajay N. Jain. bioinformatics, 18(7):961-970, 2002.

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