Andrean Goede - researchr alias

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2010

MPlot - a server to analyze and visualize tertiary structure contacts and geometrical features of helical membrane proteinsAlexander Rose, Andrean Goede, Peter Werner Hildebrand. nar, 38(Web-Server-Issue):602-608, 2010. [doi]

2009

SuperLooper - a prediction server for the modeling of loops in globular and membrane proteinsPeter Werner Hildebrand, Andrean Goede, Raphael A. Bauer, Bjoern Gruening, Jochen Ismer, Elke Michalsky, Robert Preissner. nar, 37(Web-Server-Issue):571-574, 2009. [doi]

RHYTHM - a server to predict the orientation of transmembrane helices in channels and membrane-coilsAlexander Rose, Stephan Lorenzen, Andrean Goede, BjÃ¶rn Gruening, Peter Werner Hildebrand. nar, 37(Web-Server-Issue):575-580, 2009. [doi]

Voronoia: analyzing packing in protein structuresKristian Rother, Peter Werner Hildebrand, Andrean Goede, Bjoern Gruening, Robert Preissner. nar, 37(Database-Issue):393-395, 2009. [doi]

2008

SuperimposÃ©: a 3D structural superposition serverRaphael A. Bauer, Philip E. Bourne, Arno Formella, Cornelius FrÃ¶mmel, Christoph Gille, Andrean Goede, Aysam Guerler, Andreas Hoppe, Ernst-Walter Knapp, Thorsten PÃ¶schel, Burghardt Wittig, Valentin Ziegler, Robert Preissner. nar, 36(Web-Server-Issue):47-54, 2008. [doi]

2006

2005

2004

Comparison of 2::::D:::: Similarity and 3::::D:::: Superposition. Application to Searching a Conformational Drug DatabaseMartin Thimm, Andrean Goede, Stefan Hougardy, Robert Preissner. jcisd, 44(5):1816-1822, 2004. [doi]

2003

Accelerating screening of 3D protein data with a graph theoretical approachCornelius Frömmel, Christoph Gille, Andrean Goede, Clemens Gröpl, Stefan Hougardy, Till Nierhoff, Robert Preissner, Martin Thimm. bioinformatics, 19(18):2442-2447, 2003.

Inhomogeneous molecular density: reference packing densities and distribution of cavities within proteinsKristian Rother, Robert Preissner, Andrean Goede, Cornelius Frömmel. bioinformatics, 19(16):2112-2121, 2003.

2001

Matching organic libraries with protein-substructuresRobert Preissner, Andrean Goede, Kristian Rother, F. Osterkamp, U. Koert, Cornelius Frömmel. jcamd, 15(9):811-817, 2001. [doi]

1999

Interfaces of Secondary Structural Elements in Proteins - Evolution of Atomic Substructures -Christoph Gille, Andrean Goede, Kristian Rother, Robert Preissner, Cornelius Frömmel. gcb 1999: 196

Homonyms and synonyms in the Dictionary of Interfaces in Proteins (DIP)Robert Preissner, Andrean Goede, Cornelius Frömmel. bioinformatics, 15(10):832-836, 1999.

1998

Atomic patch similarity as a criterion of evolutionary relationship between proteinsChristoph Gille, Andrean Goede, Robert Preissner, Cornelius Frömmel. gcb 1998:

A procedure for superposition of two arbitrary atomic arrangementsAndrean Goede, Robert Preissner, Cornelius Frömmel. gcb 1998:

Dictionary of Interfaces in Proteins (DIP). Data Bank of complementary molecular surface patchesRobert Preissner, Andrean Goede, Cornelius Frömmel. gcb 1998:

1997

Voronoi cell: New method for allocation of space among atoms: Elimination of avoidable errors in calculation of atomic volume and densityAndrean Goede, Robert Preissner, Cornelius Frömmel. jcc, 18(9):1113-1123, 1997. [doi]