Eugene Kolker - researchr alias

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Viewing Publication 1 - 21 from 21

2018

Data Science Community Matures with Diversity: Conference Observations, Highlights, and Interviews - Strata Data Conference, New York, September 11-13, 2018Eugene Kolker. bigdata, 6(4):305-313, 2018. [doi]

2016

2015

Beyond protein expression, MOPED goes multi-omicsElizabeth Montague, Imre Janko, Larissa Stanberry, Elaine Lee, John Choiniere, Nathaniel Anderson, Elizabeth Stewart, William Broomall, Roger Higdon, Natali Kolker, Eugene Kolker. nar, 43(Database-Issue):1145-1151, 2015. [doi]

2014

2013

Introducing a Metadata Checklist for Omics DataEdd Dumbill, Eugene Kolker. bigdata, 1(4):195, 2013. [doi]

Differential Expression Analysis for PathwaysWinston A. Haynes, Roger Higdon, Larissa Stanberry, Dwayne Collins, Eugene Kolker. ploscb, 9(3), 2013. [doi]

Unraveling the Complexities of Life Sciences DataRoger Higdon, Winston Haynes, Larissa Stanberry, Elizabeth Stewart, Gregory Yandl, Chris Howard, William Broomall, Natali Kolker, Eugene Kolker. bigdata, 1(1):42-50, 2013. [doi]

Medications as a Predictor of Medical ComplexityRoger Higdon, Elizabeth Stewart, Jared C. Roach, Caroline Dombrowski, Larissa Stanberry, Holly Clifton, Natali Kolker, Gerald van Belle, Mark A. Del Beccaro, Eugene Kolker. bigdata, 1(4):237-244, 2013. [doi]

Toward More Transparent and Reproducible Omics Studies Through a Common Metadata Checklist and Data PublicationsEugene Kolker, Vural Özdemir, Lennart Martens, William Hancock, Gordon A. Anderson, Nathaniel Anderson, Sukru Aynacioglu, Ancha V. Baranova, Shawn R. Campagna, Rui Chen, John Choiniere, Stephen P. Dearth, Wu-chun Feng, Lynnette Ferguson, Geoffrey C. Fox, Dmitrij Frishman, Robert Grossman, Allison P. Heath, Roger Higdon, Mara H. Hutz, Imre Janko, Lihua Jiang, Sanjay Joshi, Alexander Kel, Joseph W. Kemnitz, Isaac S. Kohane, Natali Kolker, Doron Lancet, Elaine Lee, Weizhong Li, Andrey Lisitsa, Adrian Llerena, Courtney MacNealy-Koch, Jean-Claude Marshall, Paola Masuzzo, Amanda May, George Mias, Matthew E. Monroe, Elizabeth Montague, Sean Mooney, Alexey I. Nesvizhskii, Santosh Noronha, Gilbert S. Omenn, Harsha Rajasimha, Preveen Ramamoorthy, Jerry Sheehan, Larry Smarr, Charles V. Smith, Todd Smith, Michael Snyder, Srikanth Rapole, Sanjeeva Srivastava, Larissa Stanberry, Elizabeth Stewart, Stefano Toppo, Peter Uetz, Kenneth Verheggen, Brynn H. Voy, Louise Warnich, Steven W. Wilhelm, Gregory Yandl. bigdata, 1(4):196-201, 2013. [doi]

Proteomics and Metabolomics ExperimentsMichael Snyder, George Mias, Larissa Stanberry, Eugene Kolker. bigdata, 1(4):202-206, 2013. [doi]

Delsa Workshop IV: Launching the Quantified Human InitiativeElizabeth Stewart, Todd Smith, Andrea De Souza, Jack Faris, Lennart Martens, Sophie Mohin, Vural Özdemir, Courtney MacNealy-Koch, Eugene Kolker. bigdata, 1(3):187-190, 2013. [doi]

2012

MOPED: Model Organism Protein Expression DatabaseEugene Kolker, Roger Higdon, Winston Haynes, Dean Welch, William Broomall, Doron Lancet, Larissa Stanberry, Natali Kolker. nar, 40(Database-Issue):1093-1099, 2012. [doi]

2010

Modeling sequence and function similarity between proteins for protein functional annotationRoger Higdon, Brenton Louie, Eugene Kolker. hpdc 2010: 499-502 [doi]

The necessity of adjusting tests of protein category enrichment in discovery proteomicsBrenton Louie, Roger Higdon, Eugene Kolker. bioinformatics, 26(24):3007-3011, 2010. [doi]

2008

A note on the false discovery rate and inconsistent comparisons between experimentsRoger Higdon, Gerald van Belle, Eugene Kolker. bioinformatics, 24(10):1225-1228, 2008. [doi]

2007

A predictive model for identifying proteins by a single peptide matchRoger Higdon, Eugene Kolker. bioinformatics, 23(3):277-280, 2007. [doi]

2005

Integration of Data for Gene Annotation Using the BioMediator SystemBrenton Louie, Peter Mork, Ron Shaker, Natali Kolker, Eugene Kolker, Peter Tarczy-Hornoch. amia 2005: [doi]

2002

Identifying operons and untranslated regions of transcripts using Escherichia coli RNA expression analysisBrian Tjaden, David R. Haynor, Sergey Stolyar, Carsten Rosenow, Eugene Kolker. ismb 2002: 337-344

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