Guy Perrière - researchr alias

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2007

Integrating transcription factor binding site information with gene expression datasetsIan B. Jeffery, Stephen F. Madden, Paul A. McGettigan, Guy Perrière, Aedín C. Culhane, Desmond G. Higgins. bioinformatics, 23(3):298-305, 2007. [doi]

2006

HoSeqI: automated homologous sequence identification in gene family databasesAnne-Muriel Arigon, Guy Perrière, Manolo Gouy. bioinformatics, 22(14):1786-1787, 2006. [doi]

2005

Optimized between-group classification: a new jackknife-based gene selection procedure for genome-wide expression dataFlorent Baty, Michel P. Bihl, Guy Perrière, Aedín C. Culhane, Martin H. Brutsche. bmcbi, 6:239, 2005. [doi]

Online synonymous codon usage analyses with the ade4 and seqinR packagesD. Charif, Jean Thioulouse, J. R. Lobry, Guy Perrière. bioinformatics, 21(4):545-547, 2005. [doi]

MADE4: an R package for multivariate analysis of gene expression dataAedín C. Culhane, Jean Thioulouse, Guy Perrière, Desmond G. Higgins. bioinformatics, 21(11):2789-2790, 2005. [doi]

Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databasesJean-François Dufayard, Laurent Duret, Simon Penel, Manolo Gouy, François Rechenmann, Guy Perrière. bioinformatics, 21(11):2596-2603, 2005. [doi]

2004

Super-tree Approach for Studying the Phylogeny of Prokaryotes: New Results on Completely Sequenced GenomesAlexandra Calteau, Vincent Daubin, Guy Perrière. iccS 2004: 700-708 [doi]

Update of NUREBASE: nuclear hormone receptor functional genomicsDavid Ruau, Jorge Duarte, Tarik Ourjdal, Guy Perrière, Vincent Laudet, Marc Robinson-Rechavi. nar, 32(Database-Issue):165-167, 2004.

The European ribosomal RNA databaseJan Wuyts, Guy Perrière, Yves Van de Peer. nar, 32(Database-Issue):101-103, 2004.

2003

2002

Between-group analysis of microarray dataAedín C. Culhane, Guy Perrière, Elizabeth C. Considine, Thomas G. Cotter, Desmond G. Higgins. bioinformatics, 18(12):1600-1608, 2002.

NUREBASE: database of nuclear hormone receptorsJorge Duarte, Guy Perrière, Vincent Laudet, Marc Robinson-Rechavi. nar, 30(1):364-368, 2002.

2000

EMGLib: the Enhanced Microbial Genomes Library (update 2000)Guy Perrière, Philippe Bessières, Bernard Labedan. nar, 28(1):68-71, 2000.

1999

JaDis: computing distances between nucleic acid sequencesI. Goncalves, M. Robinson, Guy Perrière, Dominique Mouchiroud. bioinformatics, 15(5):424-425, 1999.

The Enhanced Microbial Genomes LibraryGuy Perrière, Philippe Bessières, Bernard Labedan. nar, 27(1):63-65, 1999.

HOBACGEN: A database of homologous genes in bacteriaGuy Perrière, Laurent Duret. gcb 1999: 167-173

1998

The non-redundant Bacillus subtilis (NRSub) database: update 1998Guy Perrière, Manolo Gouy, Takashi Gojobori. nar, 26(1):60-62, 1998.

1997

The NRSub database: update 1997Guy Perrière, Ivan Moszer, Takashi Gojobori. nar, 25(1):53-56, 1997.

1996

LALNVIEW: a graphical viewer for pairwise sequence alignmentsLaurent Duret, Elisabeth Gasteiger, Guy Perrière. bioinformatics, 12(6):507-510, 1996.

On-line tools for sequence retrieval and multivariate statistics in molecular biologyGuy Perrière, Jean Thioulouse. bioinformatics, 12(1):63-69, 1996.

NRSub: a non-redundant database for Bacillus subtilisGuy Perrière, Ivan Moszer, Takashi Gojobori. nar, 24(1):41-45, 1996.

Correspondence discriminant analysis: a multivariate method for comparing classes of protein and nucleic acid sequencesGuy Perrière, J. R. Lobry, Jean Thioulouse. bioinformatics, 12(6):519-524, 1996.

1994

Building Integrated Systems for Data Representation and Analysis in Molecular BiologyGuy Perrière, François Chevenet, Frank Dorkeld, Thierry Vermat, Christian Gautier. hicss 1994: 89-97

1993

Object-Oriented Knowledge Bases for the Analysis of Prokaryotic and Eukaryotic GenomesGuy Perrière, Frank Dorkeld, François Rechenmann, Christian Gautier. ismb 1993: 319-327

Building Large Knowledge Bases in Molecular BiologyOlivier Schmeltzer, Claudine Médigue, P. Uvietta, François Rechenmann, Frank Dorkeld, Guy Perrière, Christian Gautier. ismb 1993: 345-353