Martha L. Bulyk - researchr alias

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Viewing Publication 1 - 21 from 21

2021

Computational Challenges and Artificial Intelligence in Precision MedicineOlga Afanasiev, Joanne Berghout, Steven E. Brenner, Martha L. Bulyk, Dana C. Crawford, Jonathan H. Chen, Roxana Daneshjou, Lukasz Kidzinski. psb 2020: [doi]

2020

Session IntroductionSteven E. Brenner, Martha L. Bulyk, Dana C. Crawford, Alexander A. Morgan, Predrag Radivojac, Nicholas P. Tatonetti. psb 2020: 547-550 [doi]

2019

Reading between the genes: interpreting non-coding DNA in high-throughputJoanne Berghout, Yves A. Lussier, Francesca Vitali, Martha L. Bulyk, Maricel G. Kann, Jason H. Moore. psb 2019: 444-448 [doi]

Session introductionSteven E. Brenner, Martha L. Bulyk, Dana C. Crawford, Jill P. Mesirov, Alexander A. Morgan, Predrag Radivojac. psb 2019: 220-223 [doi]

2015

UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactionsMaxwell A. Hume, Luis A. Barrera, Stephen S. Gisselbrecht, Martha L. Bulyk. nar, 43(Database-Issue):117-122, 2015. [doi]

2013

k-mersBo Jiang, Jun S. Liu, Martha L. Bulyk. bioinformatics, 29(11):1390-1398, 2013. [doi]

2012

LOESS correction for length variation in gene set-based genomic sequence analysisAnton Aboukhalil, Martha L. Bulyk. bioinformatics, 28(11):1446-1454, 2012. [doi]

Identification of Cell Cycle-Regulated, Putative Hyphal Genes in Candida AlbicansRaluca Gordân, Saumyadipta Pyne, Martha L. Bulyk. psb 2012: 299-310 [doi]

Intrinsic Disorder Within and Flanking the DNA-Binding Domains of Human Transcription FactorsXin Guo, Martha L. Bulyk, Alexander J. Hartemink. psb 2012: 104-115 [doi]

2011

UniPROBE, update 2011: expanded content and search tools in the online database of protein-binding microarray data on protein-DNA interactionsKimberly Robasky, Martha L. Bulyk. nar, 39(Database-Issue):124-128, 2011. [doi]

2010

Distinguishing Direct versus Indirect Transcription Factor-DNA InteractionsRaluca Gordån, Alexander J. Hartemink, Martha L. Bulyk. recomb 2010: 574 [doi]

2009

Predicting the binding preference of transcription factors to individual DNA ::::k::::-mersTrevis M. Alleyne, Lourdes Peña Castillo, Gwenael Badis, Shaheynoor Talukder, Michael F. Berger, Andrew R. Gehrke, Anthony A. Philippakis, Martha L. Bulyk, Quaid Morris, Timothy R. Hughes. bioinformatics, 25(8):1012-1018, 2009. [doi]

UniPROBE: an online database of protein binding microarray data on protein-DNA interactionsDaniel E. Newburger, Martha L. Bulyk. nar, 37(Database-Issue):77-82, 2009. [doi]

2008

Session IntroductionMartha L. Bulyk, Ernest Fraenkel, Alexander J. Hartemink, Yael Mandel-Gutfreund. psb 2008: 438-440 [doi]

Functional Trends in Structural Classes of the DNA Binding Domains of Regulatory Transcription FactorsRachel Patton McCord, Martha L. Bulyk. psb 2008: 441-452 [doi]

Design of Compact, Universal DNA Microarrays for Protein Binding Microarray ExperimentsAnthony A. Philippakis, Aaron M. Qureshi, Michael F. Berger, Martha L. Bulyk. jcb, 15(7):655-665, 2008. [doi]

2007

Session IntroductionMartha L. Bulyk, Alexander J. Hartemink, Ernest Fraenkel, Gary D. Stormo. psb 2007: 470-471 [doi]

Design of Compact, Universal DNA Microarrays for Protein Binding Microarray ExperimentsAnthony A. Philippakis, Aaron M. Qureshi, Michael F. Berger, Martha L. Bulyk. recomb 2007: 430-443 [doi]

2006

Meta-analysis discovery of tissue-specific DNA sequence motifs from mammalian gene expression dataBertrand R. Huber, Martha L. Bulyk. bmcbi, 7:229, 2006. [doi]

Drosophila Muscle Founder CellsAnthony A. Philippakis, Brian W. Busser, Stephen S. Gisselbrecht, Fangxue Sherry He, Beatriz Estrada, Alan M. Michelson, Martha L. Bulyk. ploscb, 2(5), 2006. [doi]

2005

ModuleFinder: A Tool for Computational Discovery of Cis Regulatory ModulesAnthony A. Philippakis, Fangxue Sherry He, Martha L. Bulyk. psb 2005: [doi]

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