2011
- Gramene database in 2010: updates and extensionsKen Youens-Clark, Edward S. Buckler, Terry M. Casstevens, Charles Chen, Genevieve DeClerck, Paul Derwent, Palitha Dharmawardhana, Pankaj Jaiswal, Paul Kersey, A. S. Karthikeyan, Jerry Lu, Susan McCouch, Liya Ren, William Spooner, Joshua C. Stein, Jim Thomason, Sharon Wei, Doreen Ware. nar, 39(Database-Issue):1085-1094, 2011. [doi]
2005
- Integr8 and Genome Reviews: integrated views of complete genomes and proteomesPaul Kersey, Lawrence Bower, Lorna Morris, Alan Horne, Robert Petryszak, Carola Kanz, Alexander Kanapin, Ujjwal Das, Karine Michoud, Isabelle Phan, Alexandre Gattiker, Tamara Kulikova, Nadeem Faruque, Karyn Duggan, Peter Mclaren, Britt Reimholz, Laurent Duret, Simon Penel, Ingmar Reuter, Rolf Apweiler. nar, 33(Database-Issue):297-302, 2005. [doi]
- UTRdb and UTRsite: a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAsFlavio Mignone, Giorgio Grillo, Flavio Licciulli, Michele Iacono, Sabino Liuni, Paul Kersey, Jorge Duarte, Cecilia Saccone, Graziano Pesole. nar, 33(Database-Issue):141-146, 2005. [doi]
2004
2003
- Automated annotation of microbial proteomes in SWISS-PROTAlexandre Gattiker, Karine Michoud, Catherine Rivoire, Andrea H. Auchincloss, Elisabeth Coudert, Tania Lima, Paul Kersey, Marco Pagni, Christian J. A. Sigrist, Corinne Lachaize, Anne-Lise Veuthey, Elisabeth Gasteiger, Amos Bairoch. CANDC, 27(1):49-58, 2003. [doi]
- The Proteome Analysis database: a tool for the in silico analysis of whole proteomesManuela Pruess, Wolfgang Fleischmann, Alexander Kanapin, Youla Karavidopoulou, Paul Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Isabelle Phan, Florence Servant, Rolf Apweiler. nar, 31(1):414-417, 2003.
2002
- Applications of InterPro in Protein Annotation and Genome AnalysisMargaret Biswas, Joseph F. O Rourke, Evelyn Camon, Gillian Fraser, Alexander Kanapin, Youla Karavidopoulou, Paul Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Isabelle Phan, Florence Servant, Rolf Apweiler. bib, 3(3):285-295, 2002.
- Interactive InterPro-based comparisons of proteins in whole genomesAlexander Kanapin, Rolf Apweiler, Margaret Biswas, Wolfgang Fleischmann, Youla Karavidopoulou, Paul Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Thomas M. Oinn, Isabelle Phan, Florence Servant, Evgeni M. Zdobnov. bioinformatics, 18(2):374-375, 2002.
2001
- Proteome Analysis Database: online application of InterPro and CluSTr for the functional classification of proteins in whole genomesRolf Apweiler, Margaret Biswas, Wolfgang Fleischmann, Alexander Kanapin, Youla Karavidopoulou, Paul Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Isabelle Phan, Evgeni M. Zdobnov. nar, 29(1):44-48, 2001.
2000
- Proteome Analysis: Application of InterPro and CluSTr for the Functional Classification of Proteins in Whole GenomesMargaret Biswas, Rolf Apweiler, Wolfgang Fleischmann, Alexander Kanapin, Youla Karavidopoulou, Paul Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Thomas M. Oinn, Isabelle Phan, Evgeni M. Zdobnov. gcb 2000: 149-158