Sarah A. Teichmann - researchr alias

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Viewing Publication 1 - 24 from 24

2022

Modelling Technical and Biological Effects in scRNA-seq data with Scalable GPLVMsVidhi Lalchand, Aditya Ravuri, Emma Dann, Natsuhiko Kumasaka, Dinithi Sumanaweera, Rik G. H. Lindeboom, Shaista Madad, Sarah A. Teichmann, Neil D. Lawrence. mlcb 2022: 46-60 [doi]

2020

2019

Decoding human fetal liver haematopoiesisDorin-Mirel Popescu, Rachel A. Botting, Emily Stephenson, Kile Green, Simone Webb, Laura Jardine, Emily F. Calderbank, Krzysztof Polanski, Issac Goh, Mirjana Efremova, Meghan Acres, Daniel Maunder, Peter Vegh, Yorick Gitton, Jong-Eun Park, Roser Vento-Tormo, Zhichao Miao, David Dixon, Rachel Rowell, David McDonald, James Fletcher, Elizabeth Poyner, Gary Reynolds, Michael Mather, Corina Moldovan, Lira Mamanova, Frankie Greig, Matthew D. Young, Kerstin B. Meyer, Steven Lisgo, Jaume Bacardit, Andrew Fuller, Ben Millar, Barbara Innes, Susan Lindsay, Michael J. T. Stubbington, Monika S. Kowalczyk, Bo Li, Orr Ashenberg, Marcin Tabaka, Danielle Dionne, Timothy L. Tickle, Michal Slyper, Orit Rozenblatt-Rosen, Andrew Filby, Peter Carey, Alexandra-Chloé Villani, Anindita Roy, Aviv Regev, Alain Chédotal, Irene Roberts, Berthold Göttgens, Sam Behjati, Elisa Laurenti, Sarah A. Teichmann, Muzlifah Haniffa. nature, 574(7778):365-371, 2019. [doi]

The human body at cellular resolution: the NIH Human Biomolecular Atlas ProgramMichael P. Snyder, Shin Lin, Amanda Posgai, Mark Atkinson, Aviv Regev, Jennifer Rood, Orit Rozenblatt-Rosen, Leslie Gaffney, Anna Hupalowska, Rahul Satija, Nils Gehlenborg, Jay Shendure, Julia Laskin, Pehr Harbury, Nicholas A. Nystrom, Jonathan C. Silverstein, Ziv Bar-Joseph, Kun Zhang, Katy Börner, Yiing Lin, Richard Conroy, Dena Procaccini, Ananda L. Roy, Ajay Pillai, Marishka Brown, Zorina S. Galis, Long Cai, Cole Trapnell, Dana Jackson, Garry P. Nolan, William James Greenleaf, Sylvia K. Plevritis, Sara Ahadi, Stephanie A. Nevins, Hayan Lee, Christian Martijn Schuerch, Sarah Black, Vishal Gautham Venkataraaman, Ed Esplin, Aaron Horning, Amir Bahmani, Xin Sun, Sanjay Jain, James S. Hagood, Gloria Pryhuber, Peter V. Kharchenko, Bernd Bodenmiller, Todd Brusko, Michael Clare-Salzler, Harry Nick, Kevin Otto, Clive Wasserfall, Marda Jorgensen, Maigan Brusko, Sergio Maffioletti, Richard M. Caprioli, Jeffrey M. Spraggins, Danielle Gutierrez, Nathan Heath Patterson, Elizabeth K. Neumann, Raymond Harris, Mark deCaestecker, Agnes B. Fogo, Raf Van de Plas, Ken Lau, Guo-Cheng Yuan, Qian Zhu, Ruben Dries, Peng Yin, Sinem K. Saka, Jocelyn Y. Kishi, Yu Wang, Isabel Goldaracena, DongHye Ye, Kristin E. Burnum-Johnson, Paul D. Piehowski, Charles Ansong, Ying Zhu, Tushar Desai, Jay Mulye, Peter Chou, Monica Nagendran, Sarah A. Teichmann, Benedict Paten, Robert F. Murphy, Jian Ma, Vladimir Yu. Kiselev, Carl Kingsford, Allyson Ricarte, Maria Keays, Sushma A. Akoju, Matthew Ruffalo, Margaret Vella, Chuck McCallum, Leonard E. Cross, Samuel H. Friedman, Randy W. Heiland, Bruce William Herr II, Paul Macklin, Ellen M. Quardokus, Lisel Record, James P. Sluka, Griffin M. Weber, Philip D. Blood, Alexander Ropelewski, William Shirey, Robin M. Scibek, Paula M. Mabee, W. Christopher Lenhardt, Kimberly Robasky, Stavros Michailidis, John C. Marioni, Andrew Butler, Tim Stuart, Eyal Fisher, Shila Ghazanfar, Gökcen Eraslan, Tommaso Biancalani, Eeshit D. Vaishnav, Pothur Srinivas, Aaron Pawlyk, Salvatore Sechi, Elizabeth L. Wilder, James Anderson. nature, 574(7777):187-192, 2019. [doi]

2016

hi ILC progenitor and defines its development pathwayYong Yu, Jason C. H. Tsang, Cui Wang, Simon Clare, Juexuan Wang, Xi Chen, Cordelia Brandt, Leanne Kane, Lia S. Campos, Liming Lu, Gabrielle T. Belz, Andrew N. J. McKenzie, Sarah A. Teichmann, Gordon Dougan, Pentao Liu. nature, 539(7627):102-106, 2016. [doi]

2010

FlyTF: improved annotation and enhanced functionality of the ::::Drosophila:::: transcription factor databaseUlrike Pfreundt, Daniel P. James, Susan Tweedie, Derek Wilson, Sarah A. Teichmann, Boris Adryan. nar, 38(Database-Issue):443-447, 2010. [doi]

Assessing Computational Methods of Cis-Regulatory Module PredictionJing Su, Sarah A. Teichmann, Thomas A. Down. ploscb, 6(12), 2010. [doi]

2009

Protein domain organisation: adding orderSarah K. Kummerfeld, Sarah A. Teichmann. bmcbi, 10, 2009. [doi]

BloodExpress: a database of gene expression in mouse haematopoiesisDiego Miranda-Saavedra, Subhajyoti De, Matthew W. Trotter, Sarah A. Teichmann, Berthold GÃ¶ttgens. nar, 37(Database-Issue):873-879, 2009. [doi]

2008

DBD--taxonomically broad transcription factor predictions: new content and functionalityDerek Wilson, Varodom Charoensawan, Sarah K. Kummerfeld, Sarah A. Teichmann. nar, 36(Database-Issue):88-92, 2008. [doi]

2007

The (In)dependence of Alternative Splicing and Gene DuplicationDavid Talavera, Christine Vogel, Modesto Orozco, Sarah A. Teichmann, Xavier de la Cruz. ploscb, 3(3), 2007. [doi]

2006

FlyTF: a systematic review of site-specific transcription factors in the fruit fly ::::Drosophila melanogaster::::Boris Adryan, Sarah A. Teichmann. bioinformatics, 22(12):1532-1533, 2006. [doi]

DBD: a transcription factor prediction databaseSarah K. Kummerfeld, Sarah A. Teichmann. nar, 34(Database-Issue):74-81, 2006. [doi]

3D Complex: A Structural Classification of Protein ComplexesEmmanuel D. Levy, José B. Pereira-Leal, Cyrus Chothia, Sarah A. Teichmann. ploscb, 2(11), 2006. [doi]

2005

The properties of protein family space depend on experimental designVictor Kunin, Sarah A. Teichmann, Martijn A. Huynen, Christos A. Ouzounis. bioinformatics, 21(11):2618-2622, 2005. [doi]

Statistical analysis of domains in interacting protein pairsTom M. W. Nye, Carlo Berzuini, Walter R. Gilks, M. Madan Babu, Sarah A. Teichmann. bioinformatics, 21(7):993-1001, 2005. [doi]

2002

Principles of protein-protein interactionsSarah A. Teichmann. eccb 2002: 249-249

2001

An insight into domain combinationsGordana Apic, Julian Gough, Sarah A. Teichmann. ismb 2001: 83-89

2000

Fast assignment of protein structures to sequences using the Intermediate Sequence Library PDB-ISLSarah A. Teichmann, Cyrus Chothia, George M. Church, Jong Park. bioinformatics, 16(2):117-124, 2000.

PDB_ISL: an intermediate sequence library for protein structure assignmentSarah A. Teichmann, Cyrus Chothia, George M. Church, Jong Park. recomb 2000: 283-289 [doi]

1999

Genome sequences and protein structuresSarah A. Teichmann, Jong Park, Cyrus Chothia. recomb 1999: 114 [doi]

1998

DIVCLUS: an automatic method in the GEANFAMMER package that finds homologous domains in single- and multi-domain proteinsJong Park, Sarah A. Teichmann. bioinformatics, 14(2):144-150, 1998.

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1998

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