Weixiong Zhang - researchr alias

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2010

2009

2008

Fast Planning by Search in Domain Transition GraphYixin Chen, Ruoyun Huang, Weixiong Zhang. AAAI 2008: 886-891

MicroRNA prediction with a novel ranking algorithm based on random walksYunpen Xu, Xuefeng Zhou, Weixiong Zhang. ismb 2008: 50-58 [doi]

2007

2006

Rearrangement Clustering: Pitfalls, Remedies, and ApplicationsSharlee Climer, Weixiong Zhang. jmlr, 7:919-943, 2006. [doi]

Cut-and-solve: An iterative search strategy for combinatorial optimization problemsSharlee Climer, Weixiong Zhang. ai, 170(8-9):714-738, 2006. [doi]

Identification and Evaluation of Functional Modules in Gene Co-expression NetworksJianhua Ruan, Weixiong Zhang. recomb 2007: 57-76 [doi]

Identification and Evaluation of Weak Community Structures in NetworksJianhua Ruan, Weixiong Zhang. AAAI 2006:

A bi-dimensional regression tree approach to the modeling of gene expression regulationJianhua Ruan, Weixiong Zhang. bioinformatics, 22(3):332-340, 2006. [doi]

Optimal STRIPS Planning by Maximum Satisfiability and Accumulative LearningZhao Xing, Yixin Chen, Weixiong Zhang. aips 2006: 442-446

An Efficient Hybrid Strategy for Temporal PlanningZhao Xing, Yixin Chen, Weixiong Zhang. cpaior 2006: 273-287 [doi]

Data Mining Methods for Modeling Gene Expression Regulation and Their ApplicationsWeixiong Zhang. icdm 2006: 7 [doi]

2005

Frontier searchRichard E. Korf, Weixiong Zhang, Ignacio Thayer, Heath Hohwald. JACM, 52(5):715-748, 2005. [doi]

CAGER: classification analysis of gene expression regulation using multiple information sourcesJianhua Ruan, Weixiong Zhang. bmcbi, 6:114, 2005. [doi]

WordSpy: identifying transcription factor binding motifs by building a dictionary and learning a grammarGuandong Wang, Taotao Yu, Weixiong Zhang. nar, 33(Web-Server-Issue):412-416, 2005. [doi]

Build a Dictionary, Learn a Grammar, Decipher Stegoscripts, and Discover Genomic Regulatory ElementsGuandong Wang, Weixiong Zhang. recomb 2006: 80-94 [doi]

MaxSolver: An efficient exact algorithm for (weighted) maximum satisfiabilityZhao Xing, Weixiong Zhang. ai, 164(1-2):47-80, 2005. [doi]

::::Cis::::-regulatory element based targeted gene finding: genome-wide identification of abscisic acid- and abiotic stress-responsive genes in ::::Arabidopsis thaliana::::Weixiong Zhang, Jianhua Ruan, Tuan-hua David Ho, Youngsook You, Taotao Yu, Ralph S. Quatrano. bioinformatics, 21(14):3074-3081, 2005. [doi]

A Novel Local Search Algorithm for the Traveling Salesman Problem that Exploits BackbonesWeixiong Zhang, Moshe Looks. IJCAI 2005: 343-350 [doi]

Distributed stochastic search and distributed breakout: properties, comparison and applications to constraint optimization problems in sensor networksWeixiong Zhang, Guandong Wang, Zhao Xing, Lars Wittenburg. ai, 161(1-2):55-87, 2005. [doi]

Computational Characterization and Identification of Core Promoters of MicroRNA Genes in ::::C. elegans:::: , ::::H. sapiens:::: and ::::A. thaliana::::Xuefeng Zhou, Jianhua Ruan, Guandong Wang, Weixiong Zhang. recomb 2006: 235-248 [doi]

2004

Design of a High-Throughput Assay for Alternative Splicing Using Polymerase ColoniesJeremy Buhler, Richard Souvenir, Weixiong Zhang, Rob Mitra. psb 2004: 5-16 [doi]

A Linear Search Strategy using BoundsSharlee Climer, Weixiong Zhang. aips 2004: 132-141

Take a walk and cluster genes: a TSP-based approach to optimal rearrangement clusteringSharlee Climer, Weixiong Zhang. icml 2004: [doi]

ILM: a web server for predicting RNA secondary structures with pseudoknotsJianhua Ruan, Gary D. Stormo, Weixiong Zhang. nar, 32(Web-Server-Issue):146-149, 2004.

An Iterated loop matching approach to the prediction of RNA secondary structures with pseudoknotsJianhua Ruan, Gary D. Stormo, Weixiong Zhang. bioinformatics, 20(1):58-66, 2004.

Average-case analysis of best-first search in two representative directed acyclic graphsAnup K. Sen, Amitava Bagchi, Weixiong Zhang. ai, 155(1-2):183-206, 2004. [doi]

Efficient Strategies for (Weighted) Maximum SatisfiabilityZhao Xing, Weixiong Zhang. cp 2004: 690-705 [doi]

Phase Transitions and Backbones of the Asymmetric Traveling Salesman ProblemWeixiong Zhang. jair, 21:471-497, 2004. [doi]

An Improved Integer Local Search for Complex Scheduling ProblemsWeixiong Zhang, Xiaotao Zhang. kr 2004: 692-700

An Improved Integer Local Search for Complex Scheduling ProblemsWeixiong Zhang, Xiaotao Zhang. aips 2004: 83-91

Configuration landscape analysis and backbone guided local search: Part I: Satisfiability and maximum satisfiabilityWeixiong Zhang. ai, 158(1):1-26, 2004. [doi]

2003

An Iterative Loop Matching Approach to the Prediction of RNA Secondary StruJianhua Ruan, Gary D. Stormo, Weixiong Zhang. csb 2003: 519-520 [doi]

Selecting Degenerate Multiplex PCR PrimersRichard Souvenir, Jeremy Buhler, Gary D. Stormo, Weixiong Zhang. wabi 2003: 512-526 [doi]

Distributed breakout algorithm for distributed constraint optimization problems -- DBArelaxLars Wittenburg, Weixiong Zhang. atal 2003: 1158-1159 [doi]

Phase Transitions of the Asymmetric Traveling SalesmanWeixiong Zhang. IJCAI 2003: 1202-1210

Phase Transitions, Backbones and Heuristic SearchWeixiong Zhang. ictai 2003: [doi]

Backbone Guided Local Search for Maximum SatisfiabilityWeixiong Zhang, Ananda Rangan, Moshe Looks. IJCAI 2003: 1179-1186

An analysis and application of distributed constraint satisfaction and optimization algorithms in sensor networksWeixiong Zhang, Zhao Xing, Guandong Wang, Lars Wittenburg. atal 2003: 185-192 [doi]

2002

2001

2000

Towards Large-Scale Conflict Resolution: Initial ResultsHyuckchul Jung, Milind Tambe, Weixiong Zhang, Wei-Min Shen. icmas 2000: 403-404 [doi]

Divide-and-Conquer Frontier Search Applied to Optimal Sequence AlignmentRichard E. Korf, Weixiong Zhang. AAAI 2000: 910-916

Reports on the AAAI Spring Symposia (March 1999)David J. Musliner, Barney Pell, Wolff Dobson, Kai Goebel, Gautam Biswas, Sheila A. McIlraith, Giuseppina C. Gini, Sven Koenig, Shlomo Zilberstein, Weixiong Zhang. aim, 21(2):79-84, 2000.

Towards Flexible Teamwork in Persistent Teams: Extended ReportMilind Tambe, Weixiong Zhang. AAMAS, 3(2):159-183, 2000.

Depth-First Branch-and-Bound versus Local Search: A Case StudyWeixiong Zhang. AAAI 2000: 930-935

A template-based and pattern-driven approach to situation awareness and assessment in virtual humansWeixiong Zhang, Randal W. Hill Jr.. agents 2000: 116-123 [doi]

Association-Based Multiple Imputation in Multivariate Datasets: A SummaryWeixiong Zhang. icde 2000: 310 [doi]

1999

State-space search - algorithms, complexity, extensions, and applicationsWeixiong Zhang. Springer, 1999.

1998

Warfighter s Information PackagerYigal Arens, Weixiong Zhang, Yongwon Lee, Jon Dukes-Schlossberg, Marc Zev. AAAI 1998: 1095-1100

Towards Flexible Teamwork in Persistent TeamsMilind Tambe, Weixiong Zhang. icmas 1998: 277-284

Complete Anytime Beam SearchWeixiong Zhang. AAAI 1998: 425-430

1996

Epsilon-Transformation: Exploiting Phase Transitions to Solve Combinatorial Optimization ProblemsJoseph C. Pemberton, Weixiong Zhang. ai, 81(1-2):297-325, 1996. [doi]

Forward Estimation for Game-Tree SearchWeixiong Zhang. AAAI 1996: 240-245

A Study of Complexity Transitions on the Asymmetric Traveling Salesman ProblemWeixiong Zhang, Richard E. Korf. ai, 81(1-2):223-239, 1996. [doi]

1995

Performance of Linear-Space Search AlgorithmsWeixiong Zhang, Richard E. Korf. ai, 79(2):241-292, 1995. [doi]

1994

Parallel Heap Operations on an EREW PRAMWeixiong Zhang, Richard E. Korf. jpdc, 20(2):248-255, 1994.

Epsilon-Transformation: Exploiting Phase Transitions to Solve Combinatorial Optimization Problems Initial ResultsWeixiong Zhang, Joseph C. Pemberton. AAAI 1994: 895-900

1993

Depth-First vs. Best-First Search: New ResultsWeixiong Zhang, Richard E. Korf. AAAI 1993: 769-775

1992

Parallel Heap Operations on EREW PRAM: Summary of ResultsWeixiong Zhang, Richard E. Korf. ipps 1992: 315-318

An Average-Case Analysis of Branch-and-Bound with Applications: Summary of ResultsWeixiong Zhang, Richard E. Korf. AAAI 1992: 545-550

1991

Building Heaps in ParallelNageswara S. V. Rao, Weixiong Zhang. ipl, 37(6):355-358, 1991.

Optimal Parallel Quicksort on Erew PramWeixiong Zhang, Nageswara S. V. Rao. bit, 31(1):69-74, 1991.

1989

A Software System for Robot ProgrammingWeixiong Zhang. IEEEias 1989: 219-229