2011
- The Open Provenance Model core specification (v1.1)Luc Moreau, Ben Clifford, Juliana Freire, Joe Futrelle, Yolanda Gil, Paul T. Groth, Natalia Kwasnikowska, Simon Miles, Paolo Missier, Jim Myers, Beth Plale, Yogesh Simmhan, Eric G. Stephan, Jan Van den Bussche. fgcs, 27(6):743-756, 2011. [doi]
2010
- Parameterized specification, configuration and execution of data-intensive scientific workflowsVijay S. Kumar, Tahsin M. Kurç, Varun Ratnakar, Jihie Kim, Gaurang Mehta, Karan Vahi, Yoon-Ju Lee Nelson, P. Sadayappan, Ewa Deelman, Yolanda Gil, Mary W. Hall, Joel H. Saltz. cluster, 13(3):315-333, 2010. [doi]
2009
- An integrated framework for performance-based optimization of scientific workflowsVijay S. Kumar, P. Sadayappan, Gaurang Mehta, Karan Vahi, Ewa Deelman, Varun Ratnakar, Jihie Kim, Yolanda Gil, Mary W. Hall, Tahsin M. Kurç, Joel H. Saltz. hpdc 2009: 177-186 [doi]
- HPC and Grid Computing for Integrative Biomedical ResearchTahsin M. Kurç, Shannon Hastings, Vijay S. Kumar, Stephen Langella, Ashish Sharma, Tony Pan, Scott Oster, David Ervin, Justin Permar, Sivaramakrishnan Narayanan, Yolanda Gil, Ewa Deelman, Mary W. Hall, Joel H. Saltz. ijhpca, 23(3):252-264, 2009. [doi]
2008
- Special Issue: The First Provenance ChallengeLuc Moreau, Bertram Ludäscher, Ilkay Altintas, Roger S. Barga, Shawn Bowers, Steven P. Callahan, George Chin Jr., Ben Clifford, Shirley Cohen, Sarah Cohen Boulakia, Susan B. Davidson, Ewa Deelman, Luciano A. Digiampietri, Ian T. Foster, Juliana Freire, James Frew, Joe Futrelle, Tara Gibson, Yolanda Gil, Carole A. Goble, Jennifer Golbeck, Paul T. Groth, David A. Holland, Sheng Jiang, Jihie Kim, David Koop, Ales Krenek, Timothy M. McPhillips, Gaurang Mehta, Simon Miles, Dominic Metzger, Steve Munroe, Jim Myers, Beth Plale, Norbert Podhorszki, Varun Ratnakar, Emanuele Santos, Carlos Eduardo Scheidegger, Karen Schuchardt, Margo I. Seltzer, Yogesh L. Simmhan, Cláudio T. Silva, Peter Slaughter, Eric G. Stephan, Robert Stevens, Daniele Turi, Huy T. Vo, Michael Wilde, Jun Zhao, Yong Zhao. concurrency, 20(5):409-418, 2008. [doi]
2007
- Intelligent Optimization of Parallel and Distributed ApplicationsBhupesh Bansal, Ümit V. Çatalyürek, Jacqueline Chame, Chun Chen, Ewa Deelman, Yolanda Gil, Mary W. Hall, Vijay S. Kumar, Tahsin M. Kurç, Kristina Lerman, Aiichiro Nakano, Yoon-Ju Lee Nelson, Joel H. Saltz, Ashish Sharma, Priya Vashishta. ipps 2007: 1-6 [doi]
- Examining the Challenges of Scientific WorkflowsYolanda Gil, Ewa Deelman, Mark H. Ellisman, Thomas Fahringer, Geoffrey Fox, Dennis Gannon, Carole A. Goble, Miron Livny, Luc Moreau, Jim Myers. Computer, 40(12):24-32, 2007. [doi]
2006
2005
- Pegasus: A framework for mapping complex scientific workflows onto distributed systemsEwa Deelman, Gurmeet Singh, Mei-Hui Su, James Blythe, Yolanda Gil, Carl Kesselman, Gaurang Mehta, Karan Vahi, G. Bruce Berriman, John Good, Anastasia C. Laity, Joseph C. Jacob, Daniel S. Katz. sp, 13(3):219-237, 2005. [doi]
- The Semantic Web - ISWC 2005, 4th International Semantic Web Conference, ISWC 2005, Galway, Ireland, November 6-10, 2005, ProceedingsYolanda Gil, Enrico Motta, V. Richard Benjamins, Mark A. Musen, editors, Volume 3729 of Lecture Notes in Computer Science, Springer, 2005.
- Simplifying construction of complex workflows for non-expert users of the Southern California Earthquake Center Community Modeling EnvironmentPhilip Maechling, Hans Chalupsky, Maureen Dougherty, Ewa Deelman, Yolanda Gil, Sridhar Gullapalli, Vipin Gupta, Carl Kesselman, Jihie Kim, Gaurang Mehta, Brian Mendenhall, Thomas A. Russ, Gurmeet Singh, Marc Spraragen, Garrick Staples, Karan Vahi. SIGMOD, 34(3):24-30, 2005. [doi]
2004
- A short study on the success of the Gene OntologyMichael Bada, Robert Stevens, Carole A. Goble, Yolanda Gil, Michael Ashburner, Judith A. Blake, J. Michael Cherry, Midori A. Harris, Suzanna Lewis. ws, 1(2):235-240, 2004. [doi]
2003
- A Knowledge Acquisition Tool for Course of Action AnalysisKim Barker, Jim Blythe, Gary C. Borchardt, Vinay K. Chaudhri, Peter Clark, Paul R. Cohen, Julie Fitzgerald, Kenneth D. Forbus, Yolanda Gil, Boris Katz, Jihie Kim, Gary W. King, Sunil Mishra, Clayton T. Morrison, Kenneth S. Murray, Charley Otstott, Bruce W. Porter, Robert Schrag, Tomás E. Uribe, Jeffrey M. Usher, Peter Z. Yeh. AAAI 2003: 43-50
- Mapping Abstract Complex Workflows onto Grid EnvironmentsEwa Deelman, James Blythe, Yolanda Gil, Carl Kesselman, Gaurang Mehta, Karan Vahi, Kent Blackburn, Albert Lazzarini, Adam Arbree, Richard Cavanaugh, Scott Koranda. grid, 1(1):25-39, 2003. [doi]
- Proceedings of the 2nd International Conference on Knowledge Capture (K-CAP 2003), October 23-25, 2003, Sanibel Island, FL, USAJohn H. Gennari, Bruce W. Porter, Yolanda Gil, editors, ACM, 2003.
2002
2001
- Knowledge entry as the graphical assembly of componentsPeter Clark, John Thompson, Ken Barker, Bruce W. Porter, Vinay K. Chaudhri, Andrés Rodríguez, Jérôme Thoméré, Sunil Mishra, Yolanda Gil, Patrick J. Hayes, Thomas Reichherzer. kcap 2001: 22-29 [doi]
- AAAI 2000 Workshop ReportsYves Lespérance, Gerd Wagner, William P. Birmingham, Kurt D. Bollacker, Alexander Nareyek, J. Paul Walser, David W. Aha, Timothy W. Finin, Benjamin N. Grosof, Nathalie Japkowicz, Robert Holte, Lise Getoor, Carla P. Gomes, Holger H. Hoos, Alan C. Schultz, Miroslav Kubat, Tom M. Mitchell, Jörg Denzinger, Yolanda Gil, Karen L. Myers, Claudio Bettini, Angelo Montanari. aim, 22(1):127-136, 2001.
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