- Siling Wang, Yuhang Wang, Yang Xie, Guanghua Xiao. A Novel Approach to DNA Copy Number Data Segmentation. J. Bioinformatics and Computational Biology, 9(1):131-148, 2011.
- Maria Elena Ochagavía, Jamilet Miranda, Marcelo Nazábal, Alexander Martin, Lidia Inés Novoa, Ricardo Bringas, Jorge Fernandez-de-Cossío, Hanlet Camacho. A Methodology Based on Molecular Interactions and Pathways to Find Candidate genes Associated to Diseases: its Application to Schizophrenia and Alzheimer s Disease. J. Bioinformatics and Computational Biology, 9(4):541-557, 2011.
- Limsoon Wong. Brief Introduction to Some New Papers on Lateral Transfer Reconstruction, Drug Candidate Screening, Disease Gene Identification, and Other Results. J. Bioinformatics and Computational Biology, 9(4), 2011.
- Kanaka Durga Kedarisetti, Marcin J. Mizianty, Scott Dick, Lukasz A. Kurgan. Improved Sequence-Based Prediction of Strand residues. J. Bioinformatics and Computational Biology, 9(1):67-89, 2011.
- Babak Alipanahi, Xin Gao, Emre Karakoç, Shuai Cheng Li, Frank J. Balbach, Guangyu Feng, Logan Donaldson, Ming Li. Error Tolerant NMR Backbone Resonance Assignment and Automated Structure Generation. J. Bioinformatics and Computational Biology, 9(1):15-41, 2011.
- Hatice Gulcin Ozer, Yi-Wen Huang, Jiejun Wu, Jeffrey D. Parvin, Tim Hui-Ming Huang, Kun Huang. Comparing Multiple Chip-Sequencing Experiments. J. Bioinformatics and Computational Biology, 9(2):269-282, 2011.
- Santitham Prom-on, Atthawut Chanthaphan, Jonathan Hoyin Chan, Asawin Meechai. Enhancing Biological Relevance of a Weighted Gene Co-Expression Network for Functional Module Identification. J. Bioinformatics and Computational Biology, 9(1):111-129, 2011.
- Jianxiu Guo, NiNi Rao. Predicting protein Folding Rate from amino acid Sequence. J. Bioinformatics and Computational Biology, 9(1):1-13, 2011.
- Uday Kamath, Amarda Shehu, Kenneth A. De Jong. A Two-Stage Evolutionary Approach for Effective Classification of hypersensitive DNA Sequences. J. Bioinformatics and Computational Biology, 9(3):399-413, 2011.
- Sikander Hayat, Peter Walter, Yungki Park, Volkhard Helms. Prediction of the Exposure Status of transmembrane beta Barrel residues from protein Sequence. J. Bioinformatics and Computational Biology, 9(1):43-65, 2011.