Table of Contents

• Communications Latency Hiding Techniques for a Reconfigurable Optical Interconnect: Benchmark StudiesAhmad Afsahi, Nikitas J. Dimopoulos. 1-6
• Multifrontal Solvers Within the PARASOL EnvironmentPatrick Amestoy, Iain S. Duff, Jean-Yves L Excellent. 7-11
• Parallelization of a 3D FD-TD Code for the Maxwell Equations Using MPIUlf Andersson. 12-19
• Advanced Calculations and Visualization of Enzymatic Reactions with the Combined Quantum Classical Molecular Dynamics CodePiotr Bala, Pawel Grochowski, Krzysztof Nowinski, Terry W. Clark, Bogdan Lesyng, James Andrew McCammon. 20-27
• Memory Access Profiling Tools for Alpha-based ArchitecturesSusanne M. Balle, Simon C. Steely Jr.. 28-37
• Parallelized Block-Structured Newton-Type Methods in Dynamic Process SimulationJürgen Borchardt. 38-42
• Tuning the Performance of Parallel Programs on NOWs Using Performance Analysis ToolMarian Bubak, Wlodzimierz Funika, Jacek Moscinski. 43-47
• Numerical Simulation of 3D Fully Nonlinear Water Waves on Parallel ComputersXing Cai. 48-55
• Fluctuations in the Defect Creation by Ion Beam IrradiationR. Chakarova, I. Pázsit. 56-62
• Parallelisation of an Industrial Hydrodynamics Application Using the PINEAPL LibraryThomas Christensen, Arnold R. Krommer, Jesper Larsen, Lars Sørensen. 63-70
• Hyper-Rectangle Selection Strategy for Parallel Adaptive Numerical IntegrationRaimondas Ciegis, Ramunas Sablinskas, Jerzy Wasniewski. 71-75
• Parallelising Fuzzy Queries for Spatial Data Modelling on a Cray T3DAndrea Clematis, Andrea Coda, Michela Spagnuolo, Salvatore Spinello, Terence M. Sloan. 76-81
• Hyper-Systolic Implementation of BLAS-3 Routines on the APE100/Quadrics MachineMarco Coletta, Thomas Lippert, Paolo Palazzari. 82-87
• Resource Management for Ultra-scale Computational Grid ApplicationsKarl Czajkowski, Ian T. Foster, Carl Kesselman. 88-94
• A ScaLAPACK-Style Algorithm for Reducing a Regular Matrix Pair to Block Hessenberg-Triangular FormKrister Dackland, Bo Kågström. 95-103
• Parallel Tight-Binding Molecular Dynamics Code Based on Integration of HPF and Optimized Parallel LibrariesBeniamino Di Martino, Massimo Celino, Marco Briscolini, L. Colombo, Salvatore Filippone, Vittorio Rosato. 104-111
• Parallel Computation of Multidimensional Scattering Wavefunctions for Helmholtz/Schroedinger EquationsÅke Edlund, Ilan Bar-On, Uri Peskin. 112-119
• New Serial and Parallel Recursive ::::QR:::: Factorization Algorithms for SMP SystemsErik Elmroth, Fred G. Gustavson. 120-128
• Visualization of CFD ComputationsJonas Engström. 129-133
• Improving the Performance of Scientific Parallel Applications in a Cluster of WorkstationsA. Flores, José M. García. 134-141
• On the Parallelisation of Non-linear Optimisation Algorithms for Ophthalmical Lens DesignEnric Fontdecaba, José M. Cela, Juan C. Dürsteler. 142-148
• Modelica - A Language for Equation-Based Physical Modeling and High Performance SimulationPeter Fritzson. 149-160
• Distributed Georeferring of Remotely Sensed Landsat-TM Imagery Using MPIJesús D. García-Consuegra, José A. Gallud, Gabriel Sebastián. 161-166
• Parallel Test Pattern Generation Using Circuit Partitioning in a Shared-Memory MultiprocessorConsolación Gil, Julio Ortega, José Luis Bernier, Maria Dolores Gil Montoya. 167-171
• Parallel Adaptive Mesh Refinement for Large Eddy Simulation Using the Finite Element MethodDarach Golden, Neil Hurley, Sean McGrath. 172-181
• WSSMP: A High-Performance Serial and Parallel Symmetric Sparse Linear SolverAnshul Gupta, Mahesh V. Joshi, Vipin Kumar. 182-194
• Recursive Blocked Data Formats and BLAS s for Dense Linear Algebra AlgorithmsFred G. Gustavson, André Henriksson, Isak Jonsson, Bo Kågström, Per Ling. 195-206
• Superscalar GEMM-based Level 3 BLAS - The On-going Evolution of a Portable and High-Performance LibraryFred G. Gustavson, André Henriksson, Isak Jonsson, Bo Kågström, Per Ling. 207-215
• Parallel Solution of Some Large-Scale Eigenvalue Problems Arising in Chemistry and PhysicsDavid L. Harrar II, Michael R. Osborne. 216-223
• An Embarrassingly Parallel ::::ab initio:::: MD Method for LiquidsFredrik Hedman, Aatto Laaksonen. 224-229
• A New Parallel Preconditioner for the Euler EquationsLina Hemmingsson, Andreas Kähäri. 230-238
• Partitioning Sparse Rectangular Matrices for Parallel Computations of ::::Ax:::: and ::::A:::T:::v::::Bruce Hendrickson, Tamara G. Kolda. 239-247
• NetLink: A Modern Data Distribution Approach Applied to Transparent Access of High Performance Software LibrariesIvar Holmqvist, Erik Lindström. 248-254
• Modernization of Legacy Application SoftwareJeffrey Howe, Scott B. Baden, Tamara Grimmett, Keiko Nomura. 255-262
• Parallel Methods for Fluid-Structure InteractionCarl B. Jenssen, Trond Kvamsdal, Knut M. Okstad, Jørn Amundsen. 263-274
• Parallel Computing Tests on Large-Scale Convex OptimizationMarkku Kallio, Seppo Salo. 275-280
• Parallel Sparse Matrix Computations in the Industrial Strength PINEAPL LibraryArnold R. Krommer. 281-285
• Massively Parallel Linear Stability Analysis with P_ARPACK for 3D Fluid Flow Modeled with MPSalsaRichard B. Lehoucq, Andrew G. Salinger. 286-295
• Parallel Molecular Dynamics Simulations of Biomolecular SystemsAlexander Lyubartsev, Aatto Laaksonen. 296-303
• A Parallel Solver for Animal GeneticsPer Madsen, Martin Larsen. 304-308
• Scheduling of a Parallel Workload: Implementation and Use of the Argonne Easy Scheduler at PDCLars Malinowsky, Per Öster. 309-314
• An Algorithm to Evaluate Spectral Densities of High-Dimensional Stationary Diffusion Stochastic Processes with Non-linear Coefficients: The General Scheme and Issues on Implementation with PVMYevgeny V. Mamontov, Magnus Willander. 315-321
• High-Performance Simulation of Evolutionary Aspects of EpidemicsWilliam Maniatty, Boleslaw K. Szymanski, Thomas Caraco. 322-331
• A Parallel Algorithm for Computing the Extremal Eigenvalues of Very Large Sparse MatricesFredrik Manne. 332-336
• Technologies for Teracomputing: A European OptionAgostino Mathis. 337-344
• High Performance Fortran: Status and ProspectsPiyush Mehrotra, John Van Rosendale, Hans P. Zima. 345-356
• PAVOR - Parallel Adaptive Volume Rendering SystemMichael Meißner. 357-365
• Simulation Steering with SCIRun in a Distributed EnvironmentMichelle Miller, Charles D. Hansen, Christopher R. Johnson. 366-376
• Addressing the Requirements of ASCI-class SystemsJamshed H. Mirza. 377-378
• A Parallel Genetic Algorithm for the Graphs Mapping ProblemO. G. Monakhov, E. B. Grosbein. 379-384
• Parallel Wavelet TransformsOle Møller Nielsen. 385-389
• Writing a Multigrid Solver Using Co-array FortranRobert W. Numrich, John Reid, Kieun Kim. 390-399
• Exploiting Visualization and Direct Manipulation to Make Parallel Tools More CommunicativeCherri M. Pancake. 400-417
• Deploying Fault-Tolerance and Task Migration with NetSolveJames S. Plank, Henri Casanova, Micah Beck, Jack Dongarra. 418-432
• Comparison of Implicit and Explicit Parallel Programming Models for a Finite Element Simulation AlgorithmJoanna Plazek, Krzysztof Banas, Jacek Kitowski. 433-437
• Parallel Algorithms for Triangular Sylvester Equations: Design, Scheduling and Saclability IssuesPeter Poromaa. 438-446
• Fast and Quantitative Analysis of 4D Cardiac Images Using a SMP ArchitectureVincenzo Positano, Maria Filomena Santarelli, Luigi Landini, A. Benassi. 447-451
• Ab Initio Electronic Structure Methods in Parallel ComputersSami Pöykkö. 452-459
• Iterative Solution of Dense Linear Systems Arising from Integral EquationsJussi Rahola. 460-467
• Comparison of Partitioning Strategies for PDE Solvers on Multiblock GridsJarmo Rantakokko. 468-475
• Ship Design OptimizationClaus Risager, John W. Perram. 476-482
• Parallelization Strategies for the VMEC ProgramLuis F. Romero, Eva M. Ortigosa, Emilio L. Zapata, Juan A. Jiménez. 483-490
• Rational Krylov Algorithms for Eigenvalue Computation and Model ReductionAxel Ruhe, Daniel Skoogh. 491-502
• Solution of Distributed Sparse Linear Systems Using PSPARSLIBYousef Saad, Masha Sosonkina. 503-509
• Parallelization of the DAO Atmospheric General Circulation ModelWilliam Sawyer, Robert Lucchesi, Peter M. Lyster, Lawrence Takacs, Jay Walter Larson, Andrea Molod, Sharon Nebuda, Carlos Pabon-Ortiz. 510-514
• Dynamic Performance Callstack Sampling: Merging TAU and DAQVSameer Shende, Allen D. Malony, Steven T. Hackstadt. 515-520
• A Parallel Rational Krylov Algorithm for Eigenvalue ComputationsDaniel Skoogh. 521-526
• Portable Implementation of Real-Time Signal Processing Benchmarks on HPC PlatformsJinwoo Suh, Viktor K. Prasanna. 527-536
• Large Scale Active Networks SimulationKarthik Swaminathan, Radharamanan Radhakrishnan, Philip A. Wilsey, Perry Alexander. 537-542
• Forward Dependence Folding as a Method of Communication Optimization in SPMD ProgramsZdzislaw Szczerbinski. 543-550
• A Parallel Genetic Clustering for Inverse ProblemsHenryk Telega, R. Schaefer, E. Cabib. 551-556
• A Parallel Hierarchical Solver for Finite Element ApplicationsClemens-August Thole, Alexander V. Supalov, Stefan Mayer. 557-564
• Parallel Computation and Visualization of 3D, Time-Dependent, Thermal Convective FlowsPing Wang, Peggy Li. 565-573
• Recursive Formulation of Cholesky Algorithm in Fortran 90Jerzy Wasniewski, Bjarne Stig Andersen, Fred G. Gustavson. 574-578
• High Performance Linear Algebra Package for FORTRAN 90Jerzy Wasniewski, Jack Dongarra. 579-583