Abstract is missing.
- A Local Chaining Algorithm and Its Applications in Comparative GenomicsMohamed Ibrahim Abouelhoda, Enno Ohlebusch. 1-16 [doi]
- Common Intervals of Two SequencesGilles Didier. 17-24 [doi]
- A Systematic Statistical Analysis of Ion Trap Tandem Mass Spectra in View of Peptide ScoringJacques Colinge, Alexandre Masselot, Jérôme Magnin. 25-38 [doi]
- Vector Seeds: An Extension to Spaced Seeds Allows Substantial Improvements in Sensitivity and SpecifityBrona Brejová, Daniel G. Brown, Tomás Vinar. 39-54 [doi]
- A Stochastic Approach to Count RNA Molecules Using DNA Sequencing MethodsBoris Hollas, Rainer Schuler. 55-62 [doi]
- A Method to Detect Gene Structure and Alternative Splice Sites by Agreeing ESTs to a Genomic SequencePaola Bonizzoni, Graziano Pesole, Raffaella Rizzi. 63-77 [doi]
- Optimal DNA Signal Recognition Models with a Fixed Amount of Intrasignal DependencyBrona Brejová, Daniel G. Brown, Tomás Vinar. 78-94 [doi]
- New Algorithm for the Simplified Partial Digest ProblemJacek Blazewicz, M. Jaroszewski. 95-110 [doi]
- Noisy Data Make the Partial Digest Problem NP-hardMark Cieliebak, Stephan Eidenbenz, Paolo Penna. 111-123 [doi]
- Pattern Discovery Allowing Wild-Cards, Substitution Matrices, and Multiple Score FunctionsAlban Mancheron, Irena Rusu. 124-138 [doi]
- A Combinatorial Approach to Automatic Discovery of Cluster-PatternsRevital Eres, Gad M. Landau, Laxmi Parida. 139-150 [doi]
- Dynamic Programming Algorithms for Two Statistical Problems in Computational BiologySven Rahmann. 151-164 [doi]
- Consensus Networks: A Method for Visualising Incompatibilities in Collections of TreesBarbara Holland, Vincent Moulton. 165-176 [doi]
- Efficient Generation of Uniform Samples from Phylogenetic TreesPaul E. Kearney, J. Ian Munro, Derek Phillips. 177-189 [doi]
- New Efficient Algorithm for Detection of Horizontal Gene Transfer EventsAlix Boc, Vladimir Makarenkov. 190-201 [doi]
- Ancestral Maximum Likelihood of Evolutionary Trees Is HardLouigi Addario-Berry, Benny Chor, Michael T. Hallett, Jens Lagergren, Alessandro Panconesi, Todd Wareham. 202-215 [doi]
- A Linear-Time Majority Tree AlgorithmNina Amenta, Frederick Clarke, Katherine St. John. 216-227 [doi]
- Bayesian Phylogenetic Inference under a Statistical Insertion-Deletion ModelGerton Lunter, István Miklós, Alexei Drummond, Jens Ledet Jensen, Jotun Hein. 228-244 [doi]
- Better Hill-Climbing Searches for ParsimonyGaneshkumar Ganapathy, Vijaya Ramachandran, Tandy Warnow. 245-258 [doi]
- Computing Refined Buneman Trees in Cubic TimeGerth Stølting Brodal, Rolf Fagerberg, Anna Östlin, Christian N. S. Pedersen, S. Srinivasa Rao. 259-270 [doi]
- Distance Corrections on Recombinant SequencesDavid Bryant, Daniel H. Huson, Tobias H. Klöpper, Kay Nieselt-Struwe. 271-286 [doi]
- Parsimonious Reconstruction of Sequence Evolution and Haplotype BlocksYun S. Song, Jotun Hein. 287-302 [doi]
- Identifying Blocks and Sub-populations in Noisy SNP DataGad Kimmel, Roded Sharan, Ron Shamir. 303-319 [doi]
- Designing Optimally Multiplexed SNP Genotyping AssaysYonatan Aumann, Efrat Manisterski, Zohar Yakhini. 320-338 [doi]
- Minimum Recombiant Haplotype Configuration on Tree PedigreesKoichiro Doi, Jing Li 0002, Tao Jiang. 339-353 [doi]
- Efficient Energy Computation for Monte Carlo Simulation of ProteinsItay Lotan, Fabian Schwarzer, Jean-Claude Latombe. 354-373 [doi]
- Speedup LP Approach to Protein Threading via Graph ReductionJinbo Xu. 374-388 [doi]
- Homology Modeling of Proteins Using Multiple Models and Consensus Sequence AlignmentJahnavi C. Prasad, Michael Silberstein, Carlos J. Camacho, Sandor Vajda. 389-401 [doi]
- Side-Chain Structure Prediction Based on Dead-End Elimination: Single Split DEE-criterion Implementation and Elimination PowerJan A. Spriet. 402-416 [doi]
- A Large Version of the Small Parsimony ProblemJakob Fredslund, Jotun Hein, Tejs Scharling. 417-432 [doi]
- Optimal Multiple Parsimony Alignment with Affine Gap Cost Using a Phylogenetic TreeBjarne Knudsen. 433-446 [doi]
- Composition AlignmentGary Benson. 447-461 [doi]
- Match Chaining Algorithms for cDNA MappingTetsuo Shibuya, Igor Kurochkin. 462-475 [doi]
- Sequencing from Compomers: Using Mass Spectrometry for DNA De-Novo Sequencing of 200+ ntSebastian Böcker. 476-497 [doi]
- Bounds for Resquencing by HybridizationDekel Tsur. 498-511 [doi]
- Selecting Degenerate Multiplex PCR PrimersRichard Souvenir, Jeremy Buhler, Gary D. Stormo, Weixiong Zhang. 512-526 [doi]