Ozlem Keskin - researchr alias

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Viewing Publication 1 - 25 from 25

2023

The interaction between mutated DYRK1A and APP suggests a potential target for vascular cognitive impairmentMelisa Ece Zeylan, Attila Gürsoy, Simge Senyuz, Ozlem Keskin. bibm 2023: 1-7 [doi]

2022

2020

Embedding Alternative Conformations of Proteins in Protein-Protein Interaction NetworksFarideh Halakou, Attila Gürsoy, Ozlem Keskin. In Stefan Canzar, Francisca Rojas Ringeling, editors, Protein-Protein Interaction Networks, Methods and Protocols. Volume 2074 of Methods in Molecular Biology, pages 113-124, Springer, 2020. [doi]

Identification of potential inhibitors of human methionine aminopeptidase (type II) for cancer therapy: Structure-based virtual screening, ADMET prediction and molecular dynamics studiesJackson Weako, Abdullahi Ibrahim Uba, Ozlem Keskin, Attila Gürsoy, Kemal Yelekçi. CANDC, 86:107244, 2020. [doi]

2019

3D spatial organization and network-guided comparison of mutation profiles in Glioblastoma reveals similarities across patientsCansu Dincer, Tugba Kaya, Ozlem Keskin, Attila Gürsoy, Nurcan Tuncbag. ploscb, 15(9), 2019. [doi]

2018

Analysis of single amino acid variations in singlet hot spots of protein-protein interfacesE. Sila Ozdemir, Attila Gürsoy, Ozlem Keskin. bioinformatics, 34(17), 2018. [doi]

2017

Topological, functional, and structural analyses of protein-protein interaction networks of breast cancer lung and brain metastasesFarideh Halakou, Attila Gürsoy, Emel Sen Kilic, Ozlem Keskin. cibcb 2017: 1-7 [doi]

2014

2012

HotRegion: a database of predicted hot spot clustersEngin Cukuroglu, Attila Gürsoy, Ozlem Keskin. nar, 40(Database-Issue):829-833, 2012. [doi]

A Strategy Based on Protein-Protein Interface Motifs May Help in Identifying Drug Off-TargetsBillur Engin, Ozlem Keskin, Ruth Nussinov, Attila Gürsoy. jcisd, 52(8):2273-2286, 2012. [doi]

2010

CCRXP: exploring clusters of conserved residues in protein structuresShandar Ahmad, Ozlem Keskin, Kenji Mizuguchi, Akinori Sarai, Ruth Nussinov. nar, 38(Web-Server-Issue):398-401, 2010. [doi]

Interaction prediction and classification of PDZ domainsSibel Kalyoncu, Ozlem Keskin, Attila Gürsoy. bmcbi, 11:357, 2010. [doi]

HotPoint: hot spot prediction server for protein interfacesNurcan Tuncbag, Ozlem Keskin, Attila Gürsoy. nar, 38(Web-Server-Issue):402-406, 2010. [doi]

2009

2008

HotSprint: database of computational hot spots in protein interfacesEmre Guney, Nurcan Tuncbag, Ozlem Keskin, Attila Gürsoy. nar, 36(Database-Issue):662-666, 2008. [doi]

Principles of Protein Recognition and Properties of Protein-protein InterfacesOzlem Keskin, Attila Gürsoy, Ruth Nussinov. In Anna R. Panchenko, Teresa M. Przytycka, editors, Protein-protein Interactions and Networks: Identification, Computer Analysis, and Prediction. Volume 9 of Computational Biology, pages 53-65, Springer, 2008. [doi]

2006

Structure Prediction of Potato Large Subunit ADP - Glucose PyrophosphorylaseAytug Tuncel, I. Halil Kavakli, Ozlem Keskin. psb 2006: 315-321

2005

Prediction of protein-protein interactions by combining structure and sequence conservation in protein interfacesA. Selim Aytuna, Attila Gürsoy, Ozlem Keskin. bioinformatics, 21(12):2850-2855, 2005. [doi]

PRISM: protein interactions by structural matchingUtkan Ogmen, Ozlem Keskin, A. Selim Aytuna, Ruth Nussinov, Attila Gürsoy. nar, 33(Web-Server-Issue):331-336, 2005. [doi]

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