Paul Zaharias - researchr alias

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Viewing Publication 1 - 6 from 6

2023

Large-Scale Multiple Sequence Alignment and the Maximum Weight Trace Alignment Merging ProblemPaul Zaharias, Vladimir Smirnov, Tandy J. Warnow. tcbb, 20(3):1700-1712, 2023. [doi]

2022

MAGUS+eHMMs: improved multiple sequence alignment accuracy for fragmentary sequencesChengze Shen, Paul Zaharias, Tandy J. Warnow. bioinformatics, 38(4):918-924, 2022. [doi]

Re-evaluating Deep Neural Networks for Phylogeny Estimation: The Issue of Taxon SamplingPaul Zaharias, Martin Grosshauser, Tandy J. Warnow. jcb, 29(1):74-89, 2022. [doi]

2021

Accurate large-scale phylogeny-aware alignment using BAli-PhyMaya Gupta, Paul Zaharias, Tandy J. Warnow. bioinformatics, 37(24):4677-4683, 2021. [doi]

Disjoint Tree Mergers for Large-Scale Maximum Likelihood Tree EstimationMinhyuk Park, Paul Zaharias, Tandy J. Warnow. algorithms, 14(5):148, 2021. [doi]

The Maximum Weight Trace Alignment Merging ProblemPaul Zaharias, Vladimir Smirnov, Tandy J. Warnow. alcob 2021: 159-171 [doi]

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