Rafael Najmanovich - researchr alias

researchr

You are not signed in
Sign in
Sign up

Viewing Publication 1 - 16 from 16

2023

The DynaSig-ML Python package: automated learning of biomolecular dynamics-function relationshipsOlivier Mailhot, François Major, Rafael Najmanovich. bioinformatics, 39(4), April 2023. [doi]

Surfaces: a software to quantify and visualize interactions within and between proteins and ligandsNatália Teruel, Vinicius Magalhães Borges, Rafael Najmanovich. bioinformatics, 39(10), October 2023. [doi]

2022

SPEAR: Systematic ProtEin AnnotatoRMatthew Crown, Natália Teruel, Rafael Najmanovich, Matthew Bashton. bioinformatics, 38(15):3827-3829, 2022. [doi]

2021

The NRGTEN Python package: an extensible toolkit for coarse-grained normal mode analysis of proteins, nucleic acids, small molecules and their complexesOlivier Mailhot, Rafael Najmanovich. bioinformatics, 37(19):3369-3371, 2021. [doi]

2016

Parsing and model generation for biological processesLaouen Belloli, Gabriel Andrés Wainer, Rafael Najmanovich. springsim 2016: 21 [doi]

IsoMIF Finder: online detection of binding site molecular interaction field similaritiesMatthieu Chartier, Etienne Adriansen, Rafael Najmanovich. bioinformatics, 32(4):621-623, 2016. [doi]

2015

Detection of Binding Site Molecular Interaction Field SimilaritiesMatthieu Chartier, Rafael Najmanovich. jcisd, 55(8):1600-1615, 2015. [doi]

2014

A curated C. difficile strain 630 metabolic network: prediction of essential targets and inhibitorsMathieu Larocque, Thierry Chénard, Rafael Najmanovich. bmcsb, 8:117, 2014. [doi]

2012

Large-scale analysis of conserved rare codon clusters suggests an involvement in co-translational molecular recognition eventsMatthieu Chartier, Francis Gaudreault, Rafael Najmanovich. bioinformatics, 28(11):1438-1445, 2012. [doi]

Side-chain rotamer changes upon ligand binding: common, crucial, correlate with entropy and rearrange hydrogen bondingFrancis Gaudreault, Matthieu Chartier, Rafael Najmanovich. bioinformatics, 28(18):423-430, 2012. [doi]

2011

Structural Chemistry of the Histone Methyltransferases Cofactor Binding SiteValérie Campagna-Slater, Man Wai Mok, Kong T. Nguyen, Miklos Feher, Rafael Najmanovich, Matthieu Schapira. jcisd, 51(3):612-623, 2011. [doi]

2008

Detection of 3D atomic similarities and their use in the discrimination of small molecule protein-binding sitesRafael Najmanovich, Natalja Kurbatova, Janet M. Thornton. eccb 2008: 105-111 [doi]

2007

Analysis of binding site similarity, small-molecule similarity and experimental binding profiles in the human cytosolic sulfotransferase familyRafael Najmanovich, Abdellah Allali-Hassani, Richard J. Morris, Ludmila Dombrovsky, Patricia W. Pan, Masoud Vedadi, Alexander N. Plotnikov, Aled M. Edwards, Cheryl H. Arrowsmith, Janet M. Thornton. bioinformatics, 23(2):104-109, 2007. [doi]

2005

Real spherical harmonic expansion coefficients as 3D shape descriptors for protein binding pocket and ligand comparisonsRichard J. Morris, Rafael Najmanovich, Abdullah Kahraman, Janet M. Thornton. bioinformatics, 21(10):2347-2355, 2005. [doi]

2004

Importance of solvent accessibility and contact surfaces in modeling side-chain conformations in proteinsEran Eyal, Rafael Najmanovich, Brendan J. McConkey, Marvin Edelman, Vladimir Sobolev. jcc, 25(5):712-724, 2004. [doi]

2001

MutaProt: a web interface for structural analysis of point mutationsEran Eyal, Rafael Najmanovich, Vladimir Sobolev, Marvin Edelman. bioinformatics, 17(4):381-382, 2001.

Sign in or sign up to see more results.

runs on WebDSL