Suzanne S. Sindi - researchr alias

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Viewing Publication 1 - 14 from 14

2023

Inferring gene regulatory networks using transcriptional profiles as dynamical attractorsRuihao Li, Jordan C. Rozum, Morgan M. Quail, Mohammad N. Qasim, Suzanne S. Sindi, Clarissa J. Nobile, Réka Albert, Aaron D. Hernday. ploscb, 19(8), 2023. [doi]

2022

ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective variational autoencodersA. Ali Heydari, Oscar A. Davalos, Lihong Zhao, Katrina K. Hoyer, Suzanne S. Sindi. bioinformatics, 38(8):2194-2201, 2022. [doi]

Conservative finite volume method on deforming geometries: The case of protein aggregation in dividing yeast cellsA. Ali Heydari, Suzanne S. Sindi, Maxime Theillard. jcphy, 448:110755, 2022. [doi]

2020

A unifying model for the propagation of prion proteins in yeast brings insight into the [PSI+] prionPaul Lemarre, Laurent Pujo-Menjouet, Suzanne S. Sindi. ploscb, 16(5), 2020. [doi]

2016

On analytical and numerical approaches to division and label structured population modelsH. T. Banks, Kevin B. Flores, Suzanne S. Sindi. appml, 60:81-88, 2016. [doi]

2015

A study in nucleated polymerization models of protein aggregationJason K. Davis, Suzanne S. Sindi. appml, 40:97-101, 2015. [doi]

2014

A Crump-Mode-Jagers Branching Process Model of Prion Loss in YeastPeter Olofsson, Suzanne S. Sindi. jap, 51(2):453-465, 2014. [doi]

Characterization of structural variants with single molecule and hybrid sequencing approachesAnna M. Ritz, Ali Bashir, Suzanne S. Sindi, David Hsu, Iman Hajirasouliha, Benjamin J. Raphael. bioinformatics, 30(24):3458-3466, 2014. [doi]

2012

Identification of polymorphic inversions from genotypesAlejandro Cáceres, Suzanne S. Sindi, Benjamin J. Raphael, Mario Cáceres, Juan R. González. bmcbi, 13:28, 2012. [doi]

2011

Workshop: Characterization of structural variants with next generation DNA sequencingBenjamin J. Raphael, Suzanne S. Sindi, Anna M. Ritz, Ali Bashir. iccabs 2011: 275 [doi]

2010

Identification and Frequency Estimation of Inversion Polymorphisms from Haplotype DataSuzanne S. Sindi, Benjamin J. Raphael. jcb, 17(3):517-531, 2010. [doi]

2009

A geometric approach for classification and comparison of structural variantsSuzanne S. Sindi, Elena Helman, Ali Bashir, Benjamin J. Raphael. bioinformatics, 25(12), 2009. [doi]

Identification and Frequency Estimation of Inversion Polymorphisms from Haplotype DataSuzanne S. Sindi, Benjamin J. Raphael. recomb 2009: 418-433 [doi]

2007

Handbook of Computational Molecular Biology: Edited by Srinivas AluruSuzanne S. Sindi. bib, 8(3):201-203, 2007. [doi]

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