publications:
- title: "Resolution of Static Clones in Dynamic Web Pages"
  author:
  - name: "Nikita Synytskyy"
    link: "https://researchr.org/alias/nikita-synytskyy"
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  year: "2003"
  doi: "http://csdl.computer.org/comp/proceedings/wse/2003/2016/00/20160049abs.htm"
  links:
    doi: "http://csdl.computer.org/comp/proceedings/wse/2003/2016/00/20160049abs.htm"
  researchr: "https://researchr.org/publication/SynytskyyCD03%3A0"
  cites: 0
  citedby: 0
  pages: "49"
  booktitle: "5th International Workshop on Web Site Evolution (WSE 2003) - Architecture, 22 September 2003, Amsterdam, The Netherlands"
  publisher: "IEEE Computer Society"
  isbn: "0-7695-2016-2"
  kind: "inproceedings"
  key: "SynytskyyCD03:0"
- title: "Design Recovery of a Two Level System"
  author:
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  - name: "Yuling Chen"
    link: "https://researchr.org/alias/yuling-chen"
  year: "2003"
  doi: "http://computer.org/proceedings/iwpc/1883/18830023abs.htm"
  links:
    doi: "http://computer.org/proceedings/iwpc/1883/18830023abs.htm"
  tags:
  - "design"
  researchr: "https://researchr.org/publication/DeanC03"
  cites: 0
  citedby: 0
  pages: "23-32"
  booktitle: "11th International Workshop on Program Comprehension (IWPC 2003), May 10-11, 2003, Portland, Oregon, USA"
  publisher: "IEEE Computer Society"
  kind: "inproceedings"
  key: "DeanC03"
- title: "A Survey of Analysis Models and Methods in Website Verification and Testing"
  author:
  - name: "Manar H. Alalfi"
    link: "https://researchr.org/alias/manar-h.-alalfi"
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  year: "2007"
  doi: "http://dx.doi.org/10.1007/978-3-540-73597-7_25"
  links:
    doi: "http://dx.doi.org/10.1007/978-3-540-73597-7_25"
  tags:
  - "testing"
  - "analysis"
  - "survey"
  researchr: "https://researchr.org/publication/AlalfiCD07"
  cites: 0
  citedby: 0
  pages: "306-311"
  booktitle: "Web Engineering, 7th International Conference, ICWE 2007, Como, Italy, July 16-20, 2007, Proceedings"
  editor:
  - name: "Luciano Baresi"
    link: "https://researchr.org/alias/luciano-baresi"
  - name: "Piero Fraternali"
    link: "https://researchr.org/alias/piero-fraternali"
  - name: "Geert-Jan Houben"
    link: "http://wwwis.win.tue.nl/~houben/"
  volume: "4607"
  series: "Lecture Notes in Computer Science"
  publisher: "Springer"
  isbn: "978-3-540-73596-0"
  kind: "inproceedings"
  key: "AlalfiCD07"
- title: "Source Transformation for Concurrency Analysis"
  author:
  - name: "Timothy Cassidy"
    link: "https://researchr.org/alias/timothy-cassidy"
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  - name: "Jürgen Dingel"
    link: "https://researchr.org/alias/j%C3%BCrgen-dingel"
  year: "2005"
  doi: "http://dx.doi.org/10.1016/j.entcs.2005.05.012"
  links:
    doi: "http://dx.doi.org/10.1016/j.entcs.2005.05.012"
  tags:
  - "model-to-model transformation"
  - "meta-model"
  - "points-to analysis"
  - "analysis"
  - "source-to-source"
  - "model transformation"
  - "peer-to-peer"
  - "Meta-Environment"
  - "open-source"
  - "transformation"
  researchr: "https://researchr.org/publication/CassidyCDD05"
  cites: 0
  citedby: 0
  journal: "Electronic Notes in Theoretical Computer Science"
  volume: "141"
  number: "4"
  pages: "57-75"
  kind: "article"
  key: "CassidyCDD05"
- title: "Unique Renaming of Java Using Source Transformation"
  author:
  - name: "Xinping Guo"
    link: "https://researchr.org/alias/xinping-guo"
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  year: "2003"
  doi: "http://csdl.computer.org/comp/proceedings/scam/2003/2005/00/20050151abs.htm"
  links:
    doi: "http://csdl.computer.org/comp/proceedings/scam/2003/2005/00/20050151abs.htm"
  tags:
  - "model-to-model transformation"
  - "Java"
  - "meta-model"
  - "source-to-source"
  - "model transformation"
  - "Meta-Environment"
  - "open-source"
  - "transformation"
  researchr: "https://researchr.org/publication/GuoCD03"
  cites: 0
  citedby: 0
  pages: "151-160"
  booktitle: "3rd IEEE International Workshop on Source Code Analysis and Manipulation (SCAM 2003), 26-27 September 2003, Amsterdam, The Netherlands"
  publisher: "IEEE Computer Society"
  isbn: "0-7695-2005-7"
  kind: "inproceedings"
  key: "GuoCD03"
- title: "Union Schemas as a Basis for a C++ Extractor"
  author:
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  - name: "Andrew J. Malton"
    link: "http://plg1.uwaterloo.ca/~ajmalton/"
  - name: "Richard C. Holt"
    link: "http://plg.uwaterloo.ca/~holt/"
  year: "2001"
  doi: "http://computer.org/proceedings/wcre/1303/13030059abs.htm"
  links:
    doi: "http://computer.org/proceedings/wcre/1303/13030059abs.htm"
  tags:
  - "XML"
  - "XML Schema"
  - "C++"
  researchr: "https://researchr.org/publication/DeanMH01"
  cites: 0
  citedby: 0
  pages: "59"
  booktitle: "WCRE"
  kind: "inproceedings"
  key: "DeanMH01"
- title: "Software Engineering by Source Transformation-Experience with TXL"
  author:
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  - name: "Andrew J. Malton"
    link: "http://plg1.uwaterloo.ca/~ajmalton/"
  - name: "Kevin A. Schneider"
    link: "https://researchr.org/alias/kevin-a.-schneider"
  year: "2001"
  doi: "http://doi.ieeecomputersociety.org/10.1109/SCAM.2001.972678"
  links:
    doi: "http://doi.ieeecomputersociety.org/10.1109/SCAM.2001.972678"
  tags:
  - "model-to-model transformation"
  - "transformation engineering"
  - "meta-model"
  - "source-to-source"
  - "software engineering"
  - "model-driven engineering"
  - "TXL"
  - "model transformation"
  - "Meta-Environment"
  - "open-source"
  - "transformation"
  researchr: "https://researchr.org/publication/CordyDMS01"
  cites: 0
  citedby: 0
  pages: "170-180"
  booktitle: "1st IEEE International Workshop on Source Code Analysis and Manipulation (SCAM 2001), 10 November 2001, Florence, Italy"
  publisher: "IEEE Computer Society"
  isbn: "0-7695-1387-5"
  kind: "inproceedings"
  key: "CordyDMS01"
- title: "Transforming Embedded Java Code into Custom Tags"
  author:
  - name: "Shannon Xu"
    link: "https://researchr.org/alias/shannon-xu"
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  year: "2005"
  doi: "http://dx.doi.org/10.1109/SCAM.2005.27"
  links:
    doi: "http://dx.doi.org/10.1109/SCAM.2005.27"
  tags:
  - "Java"
  - "tagging"
  researchr: "https://researchr.org/publication/XuD05%3A0"
  cites: 0
  citedby: 0
  pages: "173-182"
  booktitle: "5th IEEE International Workshop on Source Code Analysis and Manipulation (SCAM 2005), 30 September - 1 October 2005, Budapest, Hungary"
  publisher: "IEEE Computer Society"
  isbn: "0-7695-2292-0"
  kind: "inproceedings"
  key: "XuD05:0"
- title: "Enhancing Security Using Legality Assertions"
  author:
  - name: "Lei Wang"
    link: "https://researchr.org/alias/lei-wang"
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  year: "2005"
  doi: "http://doi.ieeecomputersociety.org/10.1109/WCRE.2005.36"
  links:
    doi: "http://doi.ieeecomputersociety.org/10.1109/WCRE.2005.36"
  tags:
  - "security"
  researchr: "https://researchr.org/publication/WangCD05%3A0"
  cites: 0
  citedby: 1
  pages: "35-44"
  booktitle: "12th Working Conference on Reverse Engineering (WCRE 2005), 7-11 November 2005, Pittsburgh, PA, USA"
  publisher: "IEEE Computer Society"
  isbn: "0-7695-2474-5"
  kind: "inproceedings"
  key: "WangCD05:0"
- title: "Syntax-based Vulnerability Testing of Frame-based Network Protocols"
  author:
  - name: "Oded Tal"
    link: "https://researchr.org/alias/oded-tal"
  - name: "Scott Knight"
    link: "https://researchr.org/alias/scott-knight"
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  year: "2004"
  doi: "http://dev.hil.unb.ca/Texts/PST/pdf/tal.pdf"
  links:
    doi: "http://dev.hil.unb.ca/Texts/PST/pdf/tal.pdf"
  tags:
  - "rule-based"
  - "protocol"
  - "testing"
  researchr: "https://researchr.org/publication/TalKD04"
  cites: 0
  citedby: 0
  pages: "155-160"
  booktitle: "Second Annual Conference on Privacy, Security and Trust, October 13-15, 2004, Wu Centre, University of New Brunswick, Fredericton, New Brunswick, Canada, Proceedings"
  kind: "inproceedings"
  key: "TalKD04"
- title: "Agile Parsing in TXL"
  author:
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Andrew J. Malton"
    link: "http://plg1.uwaterloo.ca/~ajmalton/"
  - name: "Kevin A. Schneider"
    link: "https://researchr.org/alias/kevin-a.-schneider"
  year: "2003"
  doi: "http://dx.doi.org/10.1023/A:1025801405075"
  links:
    doi: "http://dx.doi.org/10.1023/A:1025801405075"
  tags:
  - "TXL"
  - "parsing"
  researchr: "https://researchr.org/publication/DeanCMS03"
  cites: 0
  citedby: 0
  journal: "Automated Software Engineering"
  volume: "10"
  number: "4"
  pages: "311-336"
  kind: "article"
  key: "DeanCMS03"
- title: "HSML: Design Directed Source Code Hot Spots"
  author:
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Kevin A. Schneider"
    link: "https://researchr.org/alias/kevin-a.-schneider"
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  - name: "Andrew J. Malton"
    link: "http://plg1.uwaterloo.ca/~ajmalton/"
  year: "2001"
  doi: "http://computer.org/proceedings/iwpc/1131/11310145abs.htm"
  links:
    doi: "http://computer.org/proceedings/iwpc/1131/11310145abs.htm"
  tags:
  - "source-to-source"
  - "design"
  - "open-source"
  researchr: "https://researchr.org/publication/CordySDM01"
  cites: 0
  citedby: 0
  pages: "145-156"
  booktitle: "9th International Workshop on Program Comprehension (IWPC 2001), 12-13 May 2001, Toronto, Canada"
  publisher: "IEEE Computer Society"
  isbn: "0-7695-1131-7"
  kind: "inproceedings"
  key: "CordySDM01"
- title: "Processing Software Source Text in Automated Design Recovery and Transformation"
  author:
  - name: "Andrew J. Malton"
    link: "http://plg1.uwaterloo.ca/~ajmalton/"
  - name: "Kevin A. Schneider"
    link: "https://researchr.org/alias/kevin-a.-schneider"
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  - name: "Darren Cousineau"
    link: "https://researchr.org/alias/darren-cousineau"
  - name: "Jason Reynolds"
    link: "https://researchr.org/alias/jason-reynolds"
  year: "2001"
  doi: "http://computer.org/proceedings/iwpc/1131/11310127abs.htm"
  links:
    doi: "http://computer.org/proceedings/iwpc/1131/11310127abs.htm"
  tags:
  - "model-to-model transformation"
  - "meta-model"
  - "source-to-source"
  - "model transformation"
  - "Meta-Environment"
  - "design"
  - "open-source"
  - "transformation"
  researchr: "https://researchr.org/publication/MaltonSCDCR01"
  cites: 0
  citedby: 0
  pages: "127-134"
  booktitle: "9th International Workshop on Program Comprehension (IWPC 2001), 12-13 May 2001, Toronto, Canada"
  publisher: "IEEE Computer Society"
  isbn: "0-7695-1131-7"
  kind: "inproceedings"
  key: "MaltonSCDCR01"
- title: "A verification framework for access control in dynamic web applications"
  author:
  - name: "Manar H. Alalfi"
    link: "https://researchr.org/alias/manar-h.-alalfi"
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  year: "2009"
  doi: "http://doi.acm.org/10.1145/1557626.1557643"
  links:
    doi: "http://doi.acm.org/10.1145/1557626.1557643"
  tags:
  - "application framework"
  - "web applications"
  - "access control"
  researchr: "https://researchr.org/publication/AlalfiCD09"
  cites: 0
  citedby: 0
  pages: "109-113"
  booktitle: "Canadian Conference on Computer Science & Software Engineering, C3S2E 2009, Montreal, Quebec, Canada, May 19-21, 2009, Proceedings"
  editor:
  - name: "Bipin C. Desai"
    link: "https://researchr.org/alias/bipin-c.-desai"
  - name: "Carson Kai-Sang Leung"
    link: "https://researchr.org/alias/carson-kai-sang-leung"
  - name: "Olga Ormandjieva"
    link: "https://researchr.org/alias/olga-ormandjieva"
  series: "ACM International Conference Proceeding Series"
  publisher: "ACM"
  isbn: "978-1-60558-401-0"
  kind: "inproceedings"
  key: "AlalfiCD09"
- title: "Transparent Reverse Engineering Tool Integration Using a Conceptual Transaction Adapter"
  author:
  - name: "Dean Jin"
    link: "https://researchr.org/alias/dean-jin"
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  year: "2003"
  doi: "http://csdl.computer.org/comp/proceedings/csmr/2003/1902/00/19020399abs.htm"
  links:
    doi: "http://csdl.computer.org/comp/proceedings/csmr/2003/1902/00/19020399abs.htm"
  tags:
  - "reverse engineering"
  researchr: "https://researchr.org/publication/JinCD03"
  cites: 0
  citedby: 0
  pages: "399-408"
  booktitle: "7th European Conference on Software Maintenance and Reengineering (CSMR 2003), 26-28 March 2003, Benevento, Italy, Proceedings"
  publisher: "IEEE Computer Society"
  isbn: "0-7695-1902-4"
  kind: "inproceedings"
  key: "JinCD03"
- title: "Selected papers from the fourth Source Code Analysis and Manipulation (SCAM 2004) Workshop"
  author:
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  - name: "Mark Harman"
    link: "http://www.dcs.kcl.ac.uk/staff/mark/"
  - name: "Rainer Koschke"
    link: "http://www.informatik.uni-bremen.de/~koschke/"
  - name: "Michael L. Van de Vanter"
    link: "https://researchr.org/alias/michael-l.-van-de-vanter"
  year: "2006"
  doi: "http://dx.doi.org/10.1016/j.jss.2006.02.039"
  links:
    doi: "http://dx.doi.org/10.1016/j.jss.2006.02.039"
  tags:
  - "points-to analysis"
  - "analysis"
  - "source-to-source"
  - "peer-to-peer"
  - "open-source"
  researchr: "https://researchr.org/publication/DeanHKV06"
  cites: 0
  citedby: 0
  journal: "Journal of Systems and Software"
  volume: "79"
  number: "9"
  pages: "1217-1218"
  kind: "article"
  key: "DeanHKV06"
- title: "Using Design Recovery Techniques to Transform Legacy Systems"
  author:
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Kevin A. Schneider"
    link: "https://researchr.org/alias/kevin-a.-schneider"
  - name: "Andrew J. Malton"
    link: "http://plg1.uwaterloo.ca/~ajmalton/"
  year: "2001"
  doi: "http://computer.org/proceedings/icsm/1189/11890622abs.htm"
  links:
    doi: "http://computer.org/proceedings/icsm/1189/11890622abs.htm"
  tags:
  - "design"
  researchr: "https://researchr.org/publication/DeanCSM01"
  cites: 0
  citedby: 0
  pages: "622-631"
  booktitle: "ICSM"
  kind: "inproceedings"
  key: "DeanCSM01"
- title: "Automated conversion of table-based websites to structured stylesheets using table recognition and clone detection"
  author:
  - name: "Andy Y. Mao"
    link: "https://researchr.org/alias/andy-y.-mao"
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  year: "2007"
  doi: "http://doi.acm.org/10.1145/1321211.1321214"
  links:
    doi: "http://doi.acm.org/10.1145/1321211.1321214"
  tags:
  - "rule-based"
  researchr: "https://researchr.org/publication/MaoCD07"
  cites: 0
  citedby: 0
  pages: "12-26"
  booktitle: "Proceedings of the 2007 conference of the Centre for Advanced Studies on Collaborative Research, October 22-25, 2007, Richmond Hill, Ontario, Canada"
  editor:
  - name: "Kelly A. Lyons"
    link: "https://researchr.org/alias/kelly-a.-lyons"
  - name: "Christian Couturier"
    link: "https://researchr.org/alias/christian-couturier"
  publisher: "IBM"
  kind: "inproceedings"
  key: "MaoCD07"
- title: "Practical language-independent detection of near-miss clones"
  author:
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  - name: "Nikita Synytskyy"
    link: "https://researchr.org/alias/nikita-synytskyy"
  year: "2004"
  doi: "http://doi.acm.org/10.1145/1034914.1034915"
  links:
    doi: "http://doi.acm.org/10.1145/1034914.1034915"
  researchr: "https://researchr.org/publication/CordyDS04"
  cites: 0
  citedby: 0
  pages: "1-12"
  booktitle: "Proceedings of the 2004 conference of the Centre for Advanced Studies on Collaborative research, October 5-7, 2004, Markham, Ontario, Canada"
  editor:
  - name: "Hanan Lutfiyya"
    link: "https://researchr.org/alias/hanan-lutfiyya"
  - name: "Janice Singer"
    link: "https://researchr.org/alias/janice-singer"
  - name: "Darlene A. Stewart"
    link: "https://researchr.org/alias/darlene-a.-stewart"
  publisher: "IBM"
  kind: "inproceedings"
  key: "CordyDS04"
- title: "Source transformation in software engineering using the TXL transformation system"
  author:
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  - name: "Andrew J. Malton"
    link: "http://plg1.uwaterloo.ca/~ajmalton/"
  - name: "Kevin A. Schneider"
    link: "https://researchr.org/alias/kevin-a.-schneider"
  year: "2002"
  tags:
  - "model-to-model transformation"
  - "transformation engineering"
  - "meta-model"
  - "source-to-source"
  - "software engineering"
  - "model-driven engineering"
  - "transformation system"
  - "TXL"
  - "model transformation"
  - "Meta-Environment"
  - "open-source"
  - "transformation"
  researchr: "https://researchr.org/publication/CordyDMS02"
  cites: 0
  citedby: 0
  journal: "Information \\& Software Technology"
  volume: "44"
  number: "13"
  pages: "827-837"
  kind: "article"
  key: "CordyDMS02"
- title: "Grammar Programming in TXL"
  author:
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Andrew J. Malton"
    link: "http://plg1.uwaterloo.ca/~ajmalton/"
  - name: "Kevin A. Schneider"
    link: "https://researchr.org/alias/kevin-a.-schneider"
  year: "2002"
  doi: "http://doi.ieeecomputersociety.org/10.1109/SCAM.2002.1134109"
  links:
    doi: "http://doi.ieeecomputersociety.org/10.1109/SCAM.2002.1134109"
  tags:
  - "TXL"
  - "programming"
  - "grammar"
  researchr: "https://researchr.org/publication/DeanCMS02"
  cites: 0
  citedby: 0
  pages: "93"
  booktitle: "2nd IEEE International Workshop on Source Code Analysis and Manipulation (SCAM 2002), 1 October 2002, Montreal, Canada"
  publisher: "IEEE Computer Society"
  isbn: "0-7695-1793-5"
  kind: "inproceedings"
  key: "DeanCMS02"
- title: "Where s the Schema? A Taxonomy of Patterns for Software Exchange"
  author:
  - name: "Dean Jin"
    link: "https://researchr.org/alias/dean-jin"
  - name: "James R.  Cordy"
    link: "http://research.cs.queensu.ca/~cordy/"
  - name: "Thomas R. Dean"
    link: "http://post.queensu.ca/~trd/"
  year: "2002"
  doi: "http://computer.org/proceedings/iwpc/1495/14950065abs.htm"
  links:
    doi: "http://computer.org/proceedings/iwpc/1495/14950065abs.htm"
  tags:
  - "XML"
  - "XML Schema"
  - "taxonomy"
  researchr: "https://researchr.org/publication/JinCD02"
  cites: 0
  citedby: 0
  pages: "65-74"
  booktitle: "10th International Workshop on Program Comprehension (IWPC 2002), 27-29 June 2002, Paris, France"
  publisher: "IEEE Computer Society"
  isbn: "0-7695-1495-2"
  kind: "inproceedings"
  key: "JinCD02"