| 1473 | -- | 1480 | John A. Capra, Mona Singh. Characterization and prediction of residues determining protein functional specificity |
| 1481 | -- | 1488 | Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente. A distance metric for a class of tree-sibling phylogenetic networks |
| 1489 | -- | 1497 | Jiangning Song, Hao Tan, Kazuhiro Takemoto, Tatsuya Akutsu. HSEpred: predict half-sphere exposure from protein sequences |
| 1498 | -- | 1502 | István A. Bogdán, Jenny Rivers, Robert J. Beynon, Daniel Coca. High-performance hardware implementation of a parallel database search engine for real-time peptide mass fingerprinting |
| 1503 | -- | 1509 | Bobbie-Jo M. Webb-Robertson, William R. Cannon, Christopher S. Oehmen, Anuj R. Shah, Vidhya Gurumoorthi, Mary S. Lipton, Katrina M. Waters. A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics |
| 1510 | -- | 1515 | Mattia Zampieri, Nicola Soranzo, Claudio Altafini. Discerning static and causal interactions in genome-wide reverse engineering problems |
| 1516 | -- | 1522 | Junil Kim, Tae-Geon Kim, Sung Hoon Jung, Jeong-Rae Kim, Taesung Park, Pat Heslop-Harrison, Kwang-Hyun Cho. Evolutionary design principles of modules that control cellular differentiation: consequences for hysteresis and multistationarity |
| 1523 | -- | 1529 | Makio Tamura, Patrik D haeseleer. Microbial genotype-phenotype mapping by class association rule mining |
| 1530 | -- | 1531 | Kay Prüfer, Udo Stenzel, Michael Dannemann, Richard E. Green, Michael Lachmann, Janet Kelso. PatMaN: rapid alignment of short sequences to large databases |
| 1532 | -- | 1533 | Michiel Van Bel, Yvan Saeys, Yves Van de Peer. FunSiP: a modular and extensible classifier for the prediction of functional sites in DNA |
| 1534 | -- | 1535 | Igor B. Kuznetsov. ProBias: a web-server for the identification of user-specified types of compositionally biased segments in protein sequences |
| 1536 | -- | 1537 | Anne-Laure Abraham, Eduardo P. C. Rocha, Joël Pothier. Swelfe: a detector of internal repeats in sequences and structures |
| 1538 | -- | 1539 | Miklós Csürös. Malin: maximum likelihood analysis of intron evolution in eukaryotes |
| 1540 | -- | 1541 | André Wehe, Mukul S. Bansal, J. Gordon Burleigh, Oliver Eulenstein. DupTree: a program for large-scale phylogenetic analyses using gene tree parsimony |
| 1542 | -- | 1546 | Scott Hazelhurst, Winston Hide, Zsuzsanna Lipták, Ramon Nogueira, Richard Starfield. An overview of the wcd EST clustering tool |
| 1547 | -- | 1548 | Pan Du, Warren A. Kibbe, Simon M. Lin. ::::lumi::::: a pipeline for processing Illumina microarray |
| 1549 | -- | 1551 | Christian Ritz, Andrej-Nikolai Spiess. ::::qpcR::::: an R package for sigmoidal model selection in quantitative real-time polymerase chain reaction analysis |
| 1552 | -- | 1553 | Samuel Neuenschwander, Frédéric Hospital, Frédéric Guillaume, Jérôme Goudet. quantiNemo: an individual-based program to simulate quantitative traits with explicit genetic architecture in a dynamic metapopulation |
| 1554 | -- | 1555 | Jason M. Gilmore, Deanna L. Auberry, Julia L. Sharp, Amanda M. White, Kevin K. Anderson, Don Simone Daly. A Bayesian estimator of protein-protein association probabilities |
| 1556 | -- | 1558 | Ashoka D. Polpitiya, Wei-Jun Qian, Navdeep Jaitly, Vladislav A. Petyuk, Joshua N. Adkins, David G. Camp II, Gordon A. Anderson, Richard D. Smith. DAnTE: a statistical tool for quantitative analysis of -omics data |
| 1559 | -- | 1561 | Curtis Huttenhower, Mark Schroeder, Maria D. Chikina, Olga G. Troyanskaya. The Sleipnir library for computational functional genomics |
| 1562 | -- | 0 | Lixiao Wang, Uwe H. Sauer. OnD-CRF: prediciting order and disorder in proteins conditional random fields |