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    Journal: IJBRA

    Volume 4, Issue 4

    351 -- 362Z. Wu, Y. Zhang. Solving large double digestion problems for DNA restriction mapping by using branch-and-bound integer linear programming
    363 -- 374Bo Geng, Xiaobo Zhou, Y. S. Hung, Stephen T. C. Wong. Comparison of Bayesian and regression models in missing enzyme identification
    375 -- 384Xing-Ming Zhao, Luonan Chen, Kazuyuki Aihara. Protein function prediction with the shortest path in functional linkage graph and boosting
    385 -- 399Morihiro Hayashida, Fuyan Sun, Sachiyo Aburatani, Katsuhisa Horimoto, Tatsuya Akutsu. Integer programming-based approach to allocation of reporter genes for cell array analysis
    400 -- 416Martin Brown, Fei He, Lam Fat Yeung. Robust measurement selection for biochemical pathway experimental design
    417 -- 434Haiyong Liao, Michael Ng, Eric Fung, Pak C. Sham. Unidimensional nonnegative scaling for genome-wide Linkage Disequilibrium maps
    435 -- 444Hirokazu Tozaki, Taiichiro Kobe, Kazuyuki Aihara, Hideo Iwasaki. An attempt to reveal a role of a transcription/translation feedback loop in the cyanobacterial KaiC protein-based circadian system by using a semi-synthetic method
    445 -- 460Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang, Luonan Chen. Protein cavity clustering based on community structure of pocket similarity network

    Volume 4, Issue 3

    221 -- 239Ivan Merelli, Alessandro Orro, Daniele D Agostino, Andrea Clematis, Luciano Milanesi. A parallel protein surface reconstruction system
    240 -- 262Jamil Ahmad, Olivier Roux, Gilles Bernot, Jean-Paul Comet, Adrien Richard. Analysing formal models of genetic regulatory networks with delays
    263 -- 273Xutao Deng, Huimin Geng, Hesham H. Ali. A Hidden Markov Model approach to predicting yeast gene function from sequential gene expression data
    274 -- 294Jonas Gamalielsson, Björn Olsson. GOSAP: Gene Ontology-Based Semantic Alignment of Biological Pathways
    295 -- 305Kunpeng Zhang, Yun Xu, Guoliang Chen. PECB: prediction of enzyme catalytic residues based on Naive Bayes classification
    306 -- 323Theo A. Knijnenburg, Lodewyk F. A. Wessels, Marcel J. T. Reinders. Creating gene set activity profiles with time-series expression data
    324 -- 336Liza S. Z. Larsen, Christopher D. Wassman, G. Wesley Hatfield, Richard H. Lathrop. Computationally Optimised DNA Assembly of synthetic genes
    337 -- 349Liping Du, Shuanhu Wu, Alan Wee-Chung Liew, David Keith Smith, Hong Yan. Spectral analysis of microarray gene expression time series data of Plasmodium falciparum

    Volume 4, Issue 2

    123 -- 136Peng Chen, De-Shuang Huang, Xing-Ming Zhao, Xueling Li. Predicting contact map using Radial Basis Function Neural Network with Conformational Energy Function
    137 -- 149Yong Chen, Guojun Li. An effective algorithm of motif finding problem
    150 -- 163Jing Li. A novel strategy for detecting multiple loci in Genome-Wide Association Studies of complex diseases
    164 -- 171Xingqin Qi, Jichang Wu, Shuguang Li, Guojun Li. Sorting by transpositions: dealing with length-weighted models
    172 -- 187J. Cui, C. Chen, H. Lu, P. Shen. Modelling of the mitochondrial apoptosis network
    188 -- 200Aili Han, Daming Zhu, Jingchang Pan. DNA solution based on sequence alignment to the Minimum Spanning Tree problem
    201 -- 210Jian Tian, Xuexia Guo, Xiaoyu Chu, Ningfeng Wu, Jun Guo, Bin Yao. Predicting the protein family of Methyl Parathion Hydrolase
    211 -- 220Zhihua Liu, Xiao Sun. Coronavirus phylogeny based on Base-Base Correlation

    Volume 4, Issue 1

    1 -- 10Zhenqiu Liu, Dechang Chen, Jianjun Paul Tian. Classification of proteomic data with multiclass Logistic Partial Least Squares algorithm
    11 -- 27Suely Oliveira, Sang-Cheol Seok. A matrix-based multilevel approach to identify functional protein modules
    28 -- 48Imad Rahal, Riad Rahhal, Baoying Wang, William Perrizo. CARIBIAM: Constrained Association Rules using Interactive Biological IncrementAl Mining
    49 -- 63Yong Li, Xiujuan Chen, Saeid Belkasim, Yi Pan. High performance bio-image database retrieval using MPI
    64 -- 80Deyu Zhou, Yulan He, Chee Keong Kwoh. Extracting Protein-Protein Interactions from MEDLINE using the Hidden Vector State model
    81 -- 95Marcel H. Schulz, Sebastian Bauer, Peter N. Robinson. The generalised k-Truncated Suffix Tree for time-and space-efficient searches in multiple DNA or protein sequences
    96 -- 106Jianxin Wang, De Yang. UPNT: Uniform Projection and Neighbourhood Thresholding method for motif discovery
    107 -- 121Patricia Buendia, Timothy M. Collins, Giri Narasimhan. The role of internal node sequences and the molecular clock in the analysis of serially-sampled data
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