External Links

    Journal: IJDMB

    Volume 6, Issue 6

    571 -- 584Rui Camacho, Rita Ferreira, Natacha Rosa, Vânia Guimarães, Nuno A. Fonseca, Vítor Santos Costa, Miguel de Sousa, Alexandre Magalhães. Predicting the secondary structure of proteins using machine learning algorithms
    585 -- 601Sara Silva, Leonardo Vanneschi. Bloat free genetic programming: application to human oral bioavailability prediction
    602 -- 616Miguel Reboiro-Jato, Daniel Glez-Peña, Fernando Díaz, Florentino Fdez-Riverola. A novel ensemble approach for multicategory classification of DNA microarray data using biological relevant gene sets
    617 -- 632Chao-yang Pang, Gang Jiang, Shipeng Wang, Ben-Qiong Hu, Qingzhong Liu, Youping Deng, Xudong Huang. Gene order computation using Alzheimer's DNA microarray gene expression data and the ant colony optimisation algorithm
    633 -- 650Shengyang Wu, Curtis P. Langlotz, Paras Lakhani, Lyle H. Ungar. Extracting templates from radiology reports using sequence alignment
    651 -- 674Damrongrit Setsirichok, Theera Piroonratana, Anunchai Assawamakin, Touchpong Usavanarong, Chanin Limwongse, Waranyu Wongseree, Chatchawit Aporntewan, Nachol Chaiyaratana. Small Ancestry Informative Marker panels for complete classification between the original four HapMap populations
    675 -- 691Nancy Yu Song, Hong Yan. Selection and mapping of DNA structural features for short gene recognition

    Volume 6, Issue 5

    463 -- 470Yuanyuan Shen, Zhe Liu, Jürg Ott. 1 penalty for detecting gene-gene interactions
    471 -- 481Min-Seok Kwon, Kyunga Kim, Sungyoung Lee, Taesung Park. cuGWAM: Genome-wide Association Multifactor Dimensionality reduction using CUDA-enabled high-performance graphics processing unit
    482 -- 489Jürg Ott, Dandan Sun. Multilocus association analysis under polygenic models
    490 -- 504Kyunghee Han, Kyee-Zu Kim, Jung Mi Oh, In-Wha Kim, Kyungim Kim, Taesung Park. Unbalanced sample size effect on genome-wide population differentiation studies
    505 -- 520Sung-Hee Park, Sangsoo Kim. Pattern discovery of multivariate phenotypes by Association Rule Mining and its scheme for Genome-Wide Association Studies
    521 -- 534Taejin Ahn, Kyunghee Park, Dae-Soon Son, Nam Huh, Sohee Oh, Taejung Bae, Jungsun Park, Ji-Hyun Lee, Kyoohyoung Rho, Sunghoon Kim, Taesung Park, Kyusang Lee. Selecting SNPs for pharmacogenomic association study
    535 -- 556Sunwon Lee, Jaewoo Kang, Junho Oh. A 2-phased approach for detecting multiple loci associations with traits
    557 -- 569Wen Zhang, Juan Liu, Meng Zhao, Qingjiao Li. Predicting linear B-cell epitopes by using sequence-derived structural and physicochemical features

    Volume 6, Issue 4

    355 -- 368Ignacio V. Martínez Espinosa, Enrique J. Gómez, M. Elena Hernando, Ricardo Villares, José Mario Mellado García. Agent-based model of macrophage action on endocrine pancreas
    369 -- 381José Paulo Lousado, José Luís Oliveira, Gabriela R. Moura, Manuel A. S. Santos. An integrative approach for codon repeats evolutionary analyses
    382 -- 395Paulo Maia, Paulo Vilaça, Isabel Rocha, Marcellinus Pont, Jean-François Tomb, Miguel Rocha. An integrated computational environment for elementary modes analysis of biochemical networks
    396 -- 405K. R. S. Sambasiva Rao, D. Srinivasa Rao. A comparative-based phylogenetic study in the evolution of 16S rRNA and rad a genes in Archaea
    406 -- 428Panagiotis Papapetrou, Gary Benson, George Kollios. Mining poly-regions in DNA
    429 -- 446Xin-Shun Xu, Ying-Xin Li. Semi-supervised clustering algorithm for haplotype assembly problem based on MEC model
    447 -- 459Yanxin Lu, Hua Xu, Neeraja B. Peterson, Qi Dai, Min Jiang, Joshua C. Denny, Mei Liu. Extracting epidemiologic exposure and outcome terms from literature using machine learning approaches

    Volume 6, Issue 3

    239 -- 254Miyoung Shin, Hyungmin Lee, Munpyo Hong. A hybrid approach to gene ranking using gene relation networks derived from literature for the identification of disease gene markers
    255 -- 271Zhaohua Ji, Chunguo Wu, Yao Wang, Renchu Guan, Huawei Tu, Xiaozhou Wu, Yanchun Liang. Tri-mean-based statistical differential gene expression detection
    272 -- 291Dianwei Han, Jun Zhang 0001, Guiliang Tang. MicroRNAfold: pre-microRNA secondary structure prediction based on modified NCM model with thermodynamics-based scoring strategy
    292 -- 303Hairong Duan, Moli Huang. Genome-wide identification and evolutionary analysis of B7-H3
    304 -- 323Francesco Archetti, Ilaria Giordani, Giancarlo Mauri, Enza Messina. A new clustering approach for learning transcriptional modules
    324 -- 334Belén Lorente-Galdos, Ignacio Medina, Carlos Morcillo-Suarez, Txema Heredia, Angel Carreño-Torres, Ricardo Sangros, Josep Alegre, Guillermo Pita, Gemma Vellalta, Núria Malats, David G. Pisano, Joaquín Dopazo, Arcadi Navarro. Select Your SNPs (SYSNPs): a web tool for automatic and massive selection of SNPs
    335 -- 353Arpit Srivastava, Abhinav Asati, Sandeep Kumar Jain, Yash Sharma, Mahua Bhattacharya. Hybrid softcomputing model for lesion identification and information combination: some case studies

    Volume 6, Issue 2

    115 -- 129Xiaoshi Yin, Jimmy Xiangji Huang, Zhoujun Li. Re-ranking with context for high-performance biomedical information retrieval
    130 -- 143Wengang Zhou, Julie A. Dickerson. StruLocPred: structure-based protein subcellular localisation prediction using multi-class support vector machine
    144 -- 161Olcay Kursun, Ergun Gumus, Ahmet Sertbas, Oleg V. Favorov. Selection of vocal features for Parkinson's Disease diagnosis
    162 -- 177Xin Geng, Jihong Guan, Qiwen Dong, Shuigeng Zhou. An improved genetic algorithm for statistical potential function design and protein structure prediction
    178 -- 195Gang Shu, Xiaodi Huang, Shanfeng Zhu. A consensus method for prioritising drug-associated target proteins
    196 -- 215Joana P. Gonçalves, Yves Moreau, Sara C. Madeira. AliBiMotif: Integrating alignment and biclustering to unravel transcription factor binding sites in DNA sequences
    216 -- 237Jeong Woo Son, Seong-Bae Park. Learning word sense disambiguation in biomedical text with difference between training and test distributions

    Volume 6, Issue 1

    1 -- 16Guimin Qin, Lin Gao. An algorithm for network motif discovery in biological networks
    17 -- 26David Weisman, Dan A. Simovici. Several remarks on the metric space of genetic codes
    27 -- 41Kai-Cheng Hsu, Yen-Fu Chen, Jinn-Moon Yang. GemAffinity: a scoring function for predicting binding affinity and Virtual Screening
    42 -- 60Xiujuan Lei, Xu Huang, Lei Shi, Aidong Zhang. Clustering PPI data based on Improved functional-flow model through Quantum-behaved PSO
    61 -- 85Tomás Arredondo, Diego Candel, Mauricio U. Leiva, Lioubov Dombrovskaia, Loreine Agulló, Michael Seeger. Inference system using softcomputing and mixed data applied in metabolic pathway datamining
    86 -- 103Indrajit Saha, Dariusz Plewczynski, Ujjwal Maulik, Sanghamitra Bandyopadhyay. Improved differential evolution for microarray analysis
    104 -- 113Ross K. K. Leung, Stephen Kwok-Wing Tsui. iMOWSE, a scoring scheme bridging in silico and in vitro digestion in PMF
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