Journal: J. Integrative Bioinformatics

Volume 8, Issue 3

0 -- 0Sérgio Matos, José Luís Oliveira. Classification methods for finding articles describing protein-protein interactions in PubMed
0 -- 0André Valério Carreiro, Orlando Anunciação, João André Carriço, Sara Cordeiro Madeira. Prognostic Prediction through Biclustering-Based Classification of Clinical Gene Expression Time Series
0 -- 0Saleh Enbiya, Fatima Mahieddine, M. Alamgir Hossain. Model Reference Adaptive Scheme for Multi-drug Infusion for Blood Pressure Control
0 -- 0Rui Camacho, Max Pereira, Vítor Santos Costa, Nuno A. Fonseca, Carlos Adriano Gonçalves, Carlos J. V. Simões, Rui M. M. Brito. A Relational Learning Approach to Structure-Activity Relationships in Drug Design Toxicity Studies
0 -- 0Anália Lourenço, Sónia Carneiro, José P. Pinto, Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha. A Study of the Short and Long-term Regulation of E. coli Metabolic Pathways
0 -- 0David N. Olivieri, José Faro, Iván Gómez-Conde, Carlos E. Tadokoro. Tracking T and B cells from two-photon microscopy imaging using constrained SMC clusters
0 -- 0Hugo López-Fernández, Miguel Reboiro-Jato, Daniel Glez-Peña, José Ramón Méndez Reboredo, Hugo Miguel Santos, Ricardo Jorge Carreira, José Luis Capelo-Martínez, Florentino Fdez-Riverola. Rapid development of proteomic applications with the AIBench framework
0 -- 0Carlos A. C. Bastos, Vera Afreixo, Armando J. Pinho, Sara P. Garcia, João M. O. S. Rodrigues, Paulo Jorge S. G. Ferreira. Inter-dinucleotide distances in the human genome: an analysis of the whole-genome and protein-coding distributions
0 -- 0Lionel Morgado, Carlos Pereira, Paula Veríssimo, António Dourado. Modelling Proteolytic Enzymes With Support Vector Machines
0 -- 0Gualberto Asencio Cortés, Jesús S. Aguilar-Ruiz. Predicting protein distance maps according to physicochemical properties
0 -- 0Fernando José Mateus da Silva, Juan Manuel Sánchez-Pérez, Juan Antonio Gómez Pulido, Miguel A. Vega-Rodríguez. Parallel Niche Pareto AlineaGA - an Evolutionary Multiobjective approach on Multiple Sequence Alignment
0 -- 0Lourdes Borrajo, Rubén Romero, Eva Lorenzo Iglesias, Carmen M. Redondo Marey. Improving imbalanced scientific text classification using sampling strategies and dictionaries
0 -- 0Rosalia Laza, Reyes Pavón, Miguel Reboiro-Jato, Florentino Fdez-Riverola. Evaluating the effect of unbalanced data in biomedical document classification

Volume 8, Issue 2

0 -- 0Kamal Taha, Ramez Elmasri. GMB: An Efficient Query Processor for Biological Data
0 -- 0Victor Lesk, Jan Taubert, Christopher J. Rawlings, Stuart J. Dunbar, Stephen Muggleton. WIBL: Workbench for Integrative Biological Learning
0 -- 0Yanju Zhang, Elia Stupka, Christiaan V. Henkel, Hans J. Jansen, Herman P. Spaink, Fons J. Verbeek. Identification of Common Carp Innate Immune Genes with Whole-Genome Sequencing and RNA-Seq Data
0 -- 0Christian Hildebrandt, Sebastian Wolf, Steffen Neumann. Database supported candidate search for Metabolite identification
0 -- 0Erik van den Akker, Bas Verbruggen, Bas T. Heijmans, Marian Beekman, Joost N. Kok, Pieternella E. Slagboom, Marcel J. T. Reinders. Integrating Protein-Protein Interaction Networks with Gene-Gene Co-Expression Networks improves Gene Signatures for Classifying Breast Cancer Metastasis
0 -- 0Jung Soh, Mei Xiao, Thao Do, Oscar Meruvia Pastor, Christoph W. Sensen. Integrative Visualization of Temporally Varying Medical Image Patterns
0 -- 0Can Türker, Fuat Akal, Ralph Schlapbach. Life Sciences Data and Application Integration with B-Fabric
0 -- 0Vesna Pajic. Putting Encyclopaedia Knowledge into Structural Form: Finite State Transducers Approach
0 -- 0Malik Alawi, Stefan Kurtz, Michael Beckstette. CASSys: an integrated software-system for the interactive analysis of ChIP-seq data
0 -- 0Marco Masseroli, Giorgio Ghisalberti, Stefano Ceri. Bio-Search Computing: Integration and global ranking of bioinformatics search results
0 -- 0Pawel Sztromwasser, Pål Puntervoll, Kjell Petersen. Data partitioning enables the use of standard SOAP Web Services in genome-scale workflows
0 -- 0Bernd W. Brandt, Jaap Heringa. Protein analysis tools and services at IBIVU
0 -- 0Christian Loyek, Alexander Bunkowski, Wolfgang Vautz, Tim W. Nattkemper. Web2.0 paves new ways for collaborative and exploratory analysis of chemical compounds in spectrometry data
0 -- 0BalaKrishna Kolluru, Sirintra Nakjang, Robert P. Hirt, Anil Wipat, Sophia Ananiadou. Automatic extraction of microorganisms and their habitats from free text using text mining workflows
0 -- 0Laura M. F. Bertens, Joris Slob, Fons J. Verbeek. A generic organ based ontology system, applied to vertebrate heart anatomy, development and physiology
0 -- 0Hendrik Mehlhorn, Falk Schreiber. DBE2 - Management of experimental data for the VANTED system
0 -- 0Ke Lin, Harrie Kools, Philip J. de Groot, Anand K. Gavai, Ram K. Basnet, Feng Cheng, Jian Wu, Xiaowu Wang, Arjen Lommen, Guido J. E. K. Hooiveld, Guusje Bonnema, Richard G. F. Visser, Michael R. Muller, Jack A. M. Leunissen. MADMAX - Management and analysis database for multiple ~omics experiments
0 -- 0Neil Swainston, Kieran Smallbone, Pedro Mendes, Douglas B. Kell, Norman W. Paton. The SuBliMinaL Toolbox: automating steps in the reconstruction of metabolic networks

Volume 8, Issue 1

0 -- 0Sabrina Pross, Bernhard Bachmann. An Advanced Environment for Hybrid Modeling of Biological Systems Based on Modelica
0 -- 0Mohammad Tabrez Anwar Shamim, Hampapathalu A. Nagarajaram. A Hierarchical Approach to Protein Fold Prediction
0 -- 0Jeffrey Q. Jiang, Andreas W. M. Dress, Ming Chen. Retraction: Towards Prediction and Prioritization of disease genes by the modularity of human phenome-genome assembled network
0 -- 0Gürkan Üstünkar, Yesim Aydin Son. METU-SNP: An Integrated Software System for SNP-Complex Disease Association Analysis
0 -- 0Andreas Pürzer, Felix Grassmann, Dietmar Birzer, Rainer Merkl. Key2Ann: a tool to process sequence sets by replacing database identifiers with a human-readable annotation