Journal: Natural Computing

Volume 17, Issue 4

675 -- 676Robert Brijder, Lulu Qian. Preface
677 -- 691David Doty, Shaopeng Zhu. Computational complexity of atomic chemical reaction networks
693 -- 707Bjarke N. Hansen, Kim S. Larsen, Daniel Merkle, Alexei Mihalchuk. DNA-templated synthesis optimization
709 -- 722Matthew R. Lakin, Andrew Phillips. Automated analysis of tethered DNA nanostructures using constraint solving
723 -- 741Marta Andrés Arroyo, Sarah Cannon, Joshua J. Daymude, Dana Randall, Andréa W. Richa. A stochastic approach to shortcut bridging in programmable matter
743 -- 757Yen-Ru Chin, Jui-Ting Tsai, Ho-Lin Chen. A minimal requirement for self-assembly of lines in polylogarithmic time
759 -- 0Matteo Cavaliere, Alfonso Rodríguez-Patón. Preface
761 -- 779Neil Dalchau, Gregory Szép, Rosa D. Hernansaiz-Ballesteros, Chris P. Barnes, Luca Cardelli, Andrew Phillips, Attila Csikász-Nagy. Computing with biological switches and clocks
781 -- 798Danilo Souza da Cunha, Rafael Silveira Xavier, Leandro Nunes de Castro. Bacterial colonies as complex adaptive systems
799 -- 809Henning Bordihn, Victor Mitrana, Maria C. Negru, Andrei Paun, Mihaela Paun. Small networks of polarized splicing processors are universal
811 -- 822Maia Baskerville, Arielle Biro, Mike Blazanin, Chang-Yu Chang, Amelia Hallworth, Nicole Sonnert, Jean C. C. Vila, Alvaro Sanchez. Ecological effects of cellular computing in microbial populations
823 -- 832Bogdan Aman, Gabriel Ciobanu. Bonding calculus
833 -- 853Yiyu Xiang, Neil Dalchau, Baojun Wang. Scaling up genetic circuit design for cellular computing: advances and prospects
855 -- 876Andrzej Skowron, Soma Dutta. Rough sets: past, present, and future
877 -- 899Xiaojun Bi, Chao Wang. A many-objective evolutionary algorithm based on hyperplane projection and penalty distance selection
901 -- 917Megha Vora, T. T. Mirnalinee. Dynamic small world particle swarm optimizer for function optimization

Volume 17, Issue 3

439 -- 440Stefania Bandini, Samira El Yacoubi, Giancarlo Mauri, Jaroslaw Was. Preface
441 -- 453Hiroshi Umeo, Keisuke Imai, Akihiro Sousa. A design of generalized minimum-state-change FSSP algorithms and their implementations
455 -- 465Antonios Dimitriadis, Martin Kutrib, Georgios Ch. Sirakoulis. Revisiting the cutting of the firing squad synchronization
467 -- 477Marcin Dembowski, Barbara Wolnik, Witold Bolt, Jan M. Baetens, Bernard De Baets. Affine continuous cellular automata solving the fixed-length density classification problem
479 -- 486Franco Bagnoli, Samira El Yacoubi, Raúl Rechtman. Toward a boundary regional control problem for Boolean cellular automata
487 -- 498Luca Mariot, Alberto Leporati. A cryptographic and coding-theoretic perspective on the global rules of cellular automata
499 -- 509Teijiro Isokawa, Ferdinand Peper, Koji Ono, Nobuyuki Matsui. A universal Brownian cellular automaton with 3 states and 2 rules
511 -- 519Aziza Merzouki, Orestis Malaspinas, Anastasiya Trushko, Aurélien Roux, Bastien Chopard. Influence of cell mechanics and proliferation on the buckling of simulated tissues using a vertex model
521 -- 536Leonardo Rundo, Carmelo Militello, Giorgio Russo, Salvatore Vitabile, Maria Carla Gilardi, Giancarlo Mauri. GTVcut for neuro-radiosurgery treatment planning: an MRI brain cancer seeded image segmentation method based on a cellular automata model
537 -- 551Guillaume Schlotterbeck, Clément Raïevsky, Laurent Lefèvre. Decentralized estimation of forest fire spread using reactive and cognitive mobile sensors
553 -- 568Valeria Lupiano, Guillermo E. Machado, Lorena P. Molina, Gino Mirocle Crisci, Salvatore Di Gregorio. Simulations of flow-like landslides invading urban areas: a cellular automata approach with SCIDDICA
569 -- 583A. Seghir, Olivier Marcou, Samira El Yacoubi. Shoreline evolution: GIS, remote sensing and cellular automata modelling
585 -- 609Michael T. M. Emmerich, André H. Deutz. A tutorial on multiobjective optimization: fundamentals and evolutionary methods
611 -- 639Hongguang Zhang, Yuanan Liu, Jie Zhou. Balanced-evolution genetic algorithm for combinatorial optimization problems: the general outline and implementation of balanced-evolution strategy based on linear diversity index
641 -- 661Chun-Feng Wang, Kui Liu. An improved particle swarm optimization algorithm based on comparative judgment
663 -- 671Marco Montalva-Medel, Pedro P. B. de Oliveira, Eric Goles. A portfolio of classification problems by one-dimensional cellular automata, over cyclic binary configurations and parallel update
673 -- 0Lijing Tan, Hong Wang, Chen Yang, Ben Niu 0002. Erratum to: A multi-objective optimization method based on discrete bacterial algorithm for environmental/economic power dispatch

Volume 17, Issue 2

221 -- 222Martyn Amos, Anne Condon. Preface
223 -- 230Adam Case, Jack H. Lutz, Donald M. Stull. Reachability problems for continuous chemical reaction networks
231 -- 248Anastasios G. Bakaoukas. An all-optical soliton FFT computational arrangement in the 3NLSE-domain
249 -- 269Henning Fernau, Lakshmanan Kuppusamy, Indhumathi Raman. Investigations on the power of matrix insertion-deletion systems with small sizes
271 -- 281Cameron Beebe. Model-based computation
283 -- 293Marcos Villagra, Abuzer Yakaryilmaz. Language recognition power and succinctness of affine automata
295 -- 0Michael J. Dinneen, Ulrich Speidel. Preface
297 -- 310Artiom Alhazov, Rudolf Freund, Sergiu Ivanov 0001, Marion Oswald, Sergey Verlan. Extended spiking neural P systems with white hole rules and their red-green variants
311 -- 319Hepzibah A. Christinal, Daniel Díaz-Pernil, T. Mathu. A uniform family of tissue P systems with protein on cells solving 3-coloring in linear time
321 -- 332Ludek Cienciala, Lucie Ciencialová. Some new results of P colonies with bounded parameters
333 -- 343Richelle Ann B. Juayong, Henry N. Adorna. On simulating cooperative transition P systems in evolution-communication P systems with energy
345 -- 373Andrea Bernini, Linda Brodo, Pierpaolo Degano, Moreno Falaschi, Diana Hermith. Process calculi for biological processes
375 -- 391Ronghua Shang, Bingqi Du, Kaiyun Dai, Licheng Jiao, Yu Xue. Memetic algorithm based on extension step and statistical filtering for large-scale capacitated arc routing problems
393 -- 402Mathilde Noual, Sylvain Sené. Synchronism versus asynchronism in monotonic Boolean automata networks
403 -- 425Sergio Miguel Tomé. The influence of computational traits on the natural selection of the nervous system
427 -- 436Eric Goles, Luis Gómez. Combinatorial game associated to the one dimensional Schelling's model of social segregation
437 -- 0Hannes Klarner, Alexander Bockmayr, Heike Siebert. Erratum to: Computing maximal and minimal trap spaces of Boolean networks

Volume 17, Issue 1

1 -- 2Damien Woods, Yannick Rondelez. Preface
3 -- 29Thomas E. Ouldridge. The importance of thermodynamics for molecular systems, and the importance of molecular systems for thermodynamics
31 -- 46Matthew J. Patitz, Robert T. Schweller, Trent A. Rogers, Scott M. Summers, Andrew Winslow. Resiliency to multiple nucleation in temperature-1 self-assembly
47 -- 65Jacob Hendricks, Meagan Olsen, Matthew J. Patitz, Trent A. Rogers, Hadley Thomas. Hierarchical self-assembly of fractals with signal-passing tiles
67 -- 79Yo-Sub Han, Hwee Kim, Makoto Ota, Shinnosuke Seki. Nondeterministic seedless oritatami systems and hardness of testing their equivalence
81 -- 96Joshua J. Daymude, Zahra Derakhshandeh, Robert Gmyr, Alexandra Porter, Andréa W. Richa, Christian Scheideler, Thim Strothmann. On the runtime of universal coating for programmable matter
97 -- 108Robert Brijder, David Doty, David Soloveichik. Democratic, existential, and consensus-based output conventions in stable computation by chemical reaction networks
109 -- 130Luca Cardelli, Marta Kwiatkowska, Max Whitby. Chemical reaction network designs for asynchronous logic circuits
131 -- 145Luca Cardelli, Marta Kwiatkowska, Luca Laurenti. Programming discrete distributions with chemical reaction networks
147 -- 160Pekka Orponen. Design methods for 3D wireframe DNA nanostructures
161 -- 182David R. Gilbert, Monika Heiner, Christian Rohr. Petri-net-based 2D design of DNA walker circuits
183 -- 199Vahid Mardanlou, Kimia C. Yaghoubi, Leopold N. Green, Hari K. K. Subramanian, Rizal F. Hariadi, Jongmin Kim, Elisa Franco. A coarse-grained model captures the temporal evolution of DNA nanotube length distributions
201 -- 219Mika Hirvensalo. Interference as a computational resource: a tutorial