Table of Contents

• Localization of brain activation through Integration of optical topography and magnetic resonance imagingMichel Mourad, Malek Adjouadi, Ilker Yaylali. [doi]
• Symmetry and Information in the Genetic CodeTidjani Négadi. [doi]
• Analysis of the effects of recombinant Human erythropoietin (EPO) on murine bone marrow populations using Mixture Modeling TechniquesGaolin Zheng, Renold Capocasale, Bernard Amegadzie, Peter J. Bugelski, Jin Lu. [doi]
• Exploring Important Issues in the Implementation of gene Set Enrichment AnalysisYongjia Wang, Stanley J. Watson, Fan Meng. [doi]
• The Construction of Structural Templates for the Modeling of conserved protein DomainsFa Zhang, Jingchun Chen, Zhiyong Liu, Bo Yuan. [doi]
• Gaussian Kernel Width Generator for Support Vector ClusteringSei-Hyung Lee, Karen M. Daniels. [doi]
• Clustering of eukaryotic orthologs based on sequence and Domain Similarities using the Markov Graph-Flow AlgorithmHatice Gulcin Ozer, Jingchun Chen, Fa Zhang, Bo Yuan. [doi]
• Using the Length Constraints of Helix to Evaluate protein secondary Structure Prediction for HelixJing He 0002, Yonggang Lu. [doi]
• Gene Selection by Weighted Fisher criterion for Multiclass PredictionJianhua Xuan, Yibin Dong, Javed I. Khan, Robert Clarke, Eric P. Hoffman, Yue Wang. [doi]
• Gene Definition in Different Databases and its Implication in microarray Data InterpretationPinglang Wang, Manhong Dai, Robert C. Thompson, Stanley J. Watson, Fan Meng. [doi]
• Sequential bifurcation Approach to Learning protein Functional ClassesMary Qu Yang, Okan K. Ersoy, Jack Y. Yang. [doi]
• Fuzzy decoding in Profile Hidden Markov Models for protein family identificationNiranjan P. Bidargaddi, Madhu Chetty, Joarder Kamruzzaman. [doi]
• The Role of Feature Redundancy in tumor ClassificationChia Huey Ooi, Madhu Chetty, Iqbal Gondal. [doi]
• Predicting and Characterizing metal-binding sites using Support Vector MachinesLeonardo Bobadilla, Fernando Niño, G. Narasimhan. [doi]
• The Merits of the Third Dimension for Visual Analysis of Multiple Anatomy OntologiesAba-Sah Dadzie, Albert Burger. [doi]
• Identification of contaminants in MALDI-ToF proteomics spectra via Data MiningChia-Yu Yen, Krzysztof J. Cios, Mark W. Duncan. [doi]
• An Algorithm for Finding Similarities in protein Active sitesKatrin Kupas, Alfred Ultsch, Gerhard Klebe. [doi]
• Stabbing Balls and Simplifying proteinsO. Daescu, J. Luo. [doi]
• Querying a Database of regulatory ElementsChengyong Yang, Erliang Zeng, Kalai Mathee, Giri Narasimhan. [doi]
• A dodecahedron-based Model of Spatial Representation of the Canonical Set of amino acidsV. A. Karasev, V. V. Luchinin, V. E. Stefanov. [doi]
• Emerging Pattern based subspace Clustering of microarray gene expression Data using Mixture ModelsYoung Bun Kim, Jung Hun Oh, Jean Gao. [doi]
• In silico Biology: haplotype Inference, Linkage disequilibrium Analysis, and microarray-based gene Selection TechniquesTianhua Niu. [doi]
• Thermodynamic Feasibility of metabolic NetworksR. Nigam, S. Liang. [doi]
• Computational Epidemiology: Bayesian disease SurveillanceKaja M. Abbas, Armin R. Mikler, Amir Ramezani, Sheena Menezes. [doi]
• A filtering Approach to splice Site Predictions in Human genesKihoon Yoon, Stephen Kwek. [doi]
• Step-Wise mutations of mRNA sequences lead to Progressive changes in calculated Folding Free energiesDavid W. Digby, William Seffens. [doi]
• Training Set Design for Pattern Discovery with Applications to protein Motif DetectionYanli Sun, Zhengyue Deng, Giri Narasimhan, Kalai Mathee. [doi]
• Non-equilibrium fluctuations in a stochastic plankton Model: periodicity of phytoplankton BloomRakhi Bhattacharyya, B. Mukhopadhyay. [doi]
• An Application of Association Rule Mining to HLA-a*0201 epitope PredictionTom Milledge, Gaolin Zheng, Giri Narasimhan. [doi]
• Mtmm - a MATLAB Toolbox for macromolecular ModelingFeng Cui, Tauqir Bibi, Zhijun Wu. [doi]
• A linear solution for haplotype Perfect Phylogeny Problem (Extended Abstract)Yunkai Liu, Cun-Quan Zhang. [doi]
• Improving Multiple whole genome Alignment by considering RearrangementJingyi Yang, Jitender S. Deogun. [doi]
• Applications of Hyper Genetic Code to BioinformaticsMiguel A. Jiménez-Montaño. [doi]
• The Rules of Degeneracy and Segregations in Genetic codes - the Chronocyclic conception and Parallels with Mendel's LawsSergei V. Petoukhov. [doi]
• Molecular mappings: Group Theory, coding Theory, and the Emergence of ReplicationDónall A. Mac Dónaill. [doi]
• Molecular versus Atomic Information Logic behind the Genetic coding Contents constrained by two Evolutionary Axes and the Fibonacci-Lucas sequenceChi-Ming Yang. [doi]
• A Distributed Multimedia Database Visualization within an Immersive Environment for BioinformaticsPierre-Emmanuel Gros, Nicolas Férey, Joan Hérisson, Rachid Gherbi. [doi]
• Counting and Enumeration of Self-assembly pathways for Symmetric macromolecular StructuresMeera Sitharam, Miklós Bóna. [doi]
• Serum proteomic Pattern Analysis for Early cancer DetectionYing Liu. [doi]
• Analysing Patterns of tripeptides using Statistical Approach and Neural Network ParadigmRaisa Szabo, Mattew He, Erick Burnham, Jessica Jurani. [doi]
• Use of EEG recordings as Valid Measures of kinesthetic and Visual imagery AbilityJ. Gualberto Cremades, Maria Tito, Malek Adjouadi, Armando Barreto. [doi]
• A two-Way Searching Algorithm for de novo peptide sequencing via tandem mass spectrometryJung Hun Oh, Young Bun Kim, Jean Gao. [doi]
• Discovery of Local protein sequence motifs using Improved k-means Clustering TechniqueWei Zhong, Gulsah Altun, Robert Harrison, Phang C. Tai, Yi Pan 0001. [doi]
• Modular Neural Networks and their Application in exon PredictionYoulian Pan, Christoph W. Sensen. [doi]
• Parallel tempering in Rosetta PracticeYaohang Li, Charlie E. M. Strauss, Andrey Gorin. [doi]
• The Application of Self Organizing Maps for the analyses of DNA sequencesHiroshi Dozono, Shigeomi Hara, Hisao Tokushima, Yoshio Noguchi. [doi]
• Computational Reconstruction of the carbon fixation pathway in Synechococcus SP. Wh 8102PhuongAn Dam, Zhengchang Su, Victor Olman, Ying Xu 0001. [doi]
• A Collimator Neural Network Model for the Classification of Genetic DataMuhammad Shoaib B. Sehgal, Iqbal Gondal, Laurence Dooley. [doi]
• Screening potential allele-frequency disequilibrium in Data from Affymetrix gene expression ArraysManhong Dai, Yongjia Wang, Elzbieta Sliwerska, Margit Burmeister, Stanley J. Watson, Huda Akil, Fan Meng. [doi]
• Aligning sequences with non-Affine Gap penalty: Plains Algorithm, a Practical Implementation, and its biological Applications in Comparative genomicsOfer H. Gill, Yi Zhou, Bud Mishra. [doi]
• Symbolic coding of amino acid and nucleotide PropertiesNikola Stambuk, Pasko Konjevoda, Nikola Gotovac. [doi]
• Rapid drug target identification in microbial genomes - an in silico Approach with Special Reference to Salmonella speciesKishore R. Sakharkar, Chandra Verma, Meena Kishore Sakharkar, Vincent T. K. Chow. [doi]
• An Algorithm for determining glycan Structures from MS/MS spectraB. Shan, K. Zhang, B. Ma, C. Zhang, G. Lajoie. [doi]
• Microarray Normalization using proportional abundanceSteven A. Eschrich, Craig A. Beam. [doi]