MSPminer: abundance-based reconstitution of microbial pan-genomes from shotgun metagenomic data - researchr publication related

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Florian Plaza Oñate, Emmanuelle Le Chatelier, Mathieu Almeida, Alessandra C. L. Cervino, Franck Gauthier, Frédéric Magoulès, S. Dusko Ehrlich, Matthieu Pichaud. MSPminer: abundance-based reconstitution of microbial pan-genomes from shotgun metagenomic data. Bioinformatics, 35(9):1544-1552, 2019. [doi]

The following publications are possibly variants of this publication:

Reconstitution de pan-génomes microbiens par séquençage métagénomique aléatoire: Application à l'étude du microbiote intestinal humain. (Abundance-based reconstitution of microbial pan-genomes from whole-metagenome shotgun sequencing data: Application to the study the human gut microbiota)Florian Plaza Oñate. PhD thesis, University of Paris-Saclay, France, 2018. [doi]

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