Abstract is missing.
- Detection of copy number variation from next generation sequencing data with total variation penalized least square optimizationJunbo Duan, Ji-Gang Zhang, John Lefante, Hong-Wen Deng, Yu-Ping Wang. 3-12 [doi]
- A conceptual data model for transcriptome project pipelineRuben Cruz Huacarpuma, Maristela Holanda, Maria Emilia M. T. Walter. 13-18 [doi]
- Regularization of sequence data for machine learning(Zhou) Bryan Bai, Stefan C. Kremer. 19-25 [doi]
- SPATA: A seeding and patching algorithm for de novo transcriptome assemblyZhiyu Zhao, Tin Chi Nguyen, Nan Deng, Kristen Marie Johnson, Dongxiao Zhu. 26-33 [doi]
- A novel framework for chimeric transcript detection based on accurate gene fusion modelFrancesco Abate, Andrea Acquaviva, Elisa Ficarra, Giulia Paciello, Enrico Macii, Alberto Ferrarini, Massimo Delledonne, Simona Soverini, Giovanni Martinelli. 34-41 [doi]
- A fragment based alignment in linear spaceJan Mendonca Correa, Alba Cristina Magalhaes Alves de Melo, Ricardo P. Jacobi, Azzedine Boukerche. 42-49 [doi]
- Evaluation of normalization methods for RNA-Seq gene expression estimationPo-Yen Wu, John H. Phan, Fengfeng Zhou, May D. Wang. 50-57 [doi]
- Computational analysis of HIV-1 evolution and epidemiologySergei L. Kosakovsky Pond. 60-63 [doi]
- Network of coordinated substitutions in the Hepatitis B virus polymeraseDavid S. Campo, Zoya Dimitrova, James Lara, Mike Purdy, Hong Thai, Sumathi Ramachandran, Lilia Ganova-Raeva, X. Zhai, Joseph C. Forbi, Chong-Gee Teo, Yuri Khudyakov. 64-71 [doi]
- Variation in physicochemical properties of the hypervariable region 1 during acute and chronic stages of hepatitis C virus infectionIrina V. Astrakhantseva, David S. Campo, Aufra Araujo, Chong-Gee Teo, Yuri Khudyakov, Saleem Kamili. 72-78 [doi]
- Assessments of intra- and inter-host diversity of hepatitis C virus using Next Generation Sequencing and Mass spectrometryZoya Dimitrova, David S. Campo, Sumathi Ramachandran, Gilberto Vaughan, Lilia Ganova-Raeva, Yulin Lin, Joseph C. Forbi, Guo-liang Xia, Pavel Skums, Brian L. Pearlman, Yuri Khudyakov. 79-86 [doi]
- CONDEX: Copy number detection in exome sequencesArthi Ramachandran, Mariann Micsinai, Itsik Pe'er. 87-93 [doi]
- Viral quasispecies reconstruction from amplicon 454 pyrosequencing readsNicholas Mancuso, Bassam Tork, Pavel Skums, Ion I. Mandoiu, Alexander Zelikovsky. 94-101 [doi]
- Host-specific HCV evolution and response to the combined interferon and ribavirin therapyJames Lara, John E. Tavis, Maureen J. Donlin, William M. Lee, He-Jun Yuan, Brian L. Pearlman, Gilberto Vaughan, Joseph C. Forbi, Guo-liang Xia, Yuri Khudyakov. 102-109 [doi]
- Modeling antigenic property of the hepatitis C virus NS3 proteinJames Lara, Yuri Khudyakov. 110-117 [doi]
- RNA-Seq based discovery and reconstruction of unannotated transcripts in partially annotated genomesSerghei Mangul, Adrian Caciula, Ion I. Mandoiu, Alexander Zelikovsky. 118-123 [doi]
- Visualization of tuberculosis patient and Mycobacterium tuberculosis complex genotype data via host-pathogen mapsKristin P. Bennett, Cagri Ozcaglar, Janani Ranganathan, Srivatsan Raghavan, Jacob Katz, Dan Croft, Bülent Yener, Amina Shabbeer. 124-129 [doi]
- QColors: An algorithm for conservative viral quasispecies reconstruction from short and non-contiguous next generation sequencing readsAustin Huang, Rami Kantor, Allison DeLong, Leeann Schreier, Sorin Istrail. 130-136 [doi]
- A parametric Bayesian method to test the association of rare variantsYufeng Shen, Yee Him Cheung, Shuang Wang, Itsik Pe'er. 137-143 [doi]
- Modelling differential interferon resistance of HCV quasispeciesPavel Skums, David S. Campo, Zoya Dimitrova, Gilberto Vaughan, Daryl T. Lau, Yuri Khudyakov. 144-148 [doi]
- Multiobjective optizition shuffled frog-leaping biclusteringJunwan Liu, Xiaohua Hu, Zhoujun Li, Junwan Liu, Yiming Chen. 151-156 [doi]
- Meta-analysis of LC-MS based metabolomic experimentsRency S. Varghese, Bin Zhou, Habtom W. Ressom. 157-164 [doi]
- Professional tennis player ranking strategy based Monte Carlo feature selectionRuifei Xie, Bin Han, Lihua Li, Juan Zhang, Lei Zhu. 165-172 [doi]
- saskPrimer - An automated pipeline for design of intron-spanning PCR primers in non-model organismsWayne E. Clarke, Christine Sidebottom, Isobel Parkin, Andrew Sharpe. 173-177 [doi]
- Synthesizing Aligned Random Pattern Digraphs from protein sequence patternsEn-Shiun Annie Lee, Andrew K. C. Wong. 178-185 [doi]
- Consistent detection of cancer biomarkers with linear modelsE. M. Rivera, Z. Irizarry, Matilde Luz Sánchez Peña, C. E. Isaza, J. Seguel, Mauricio Cabrera-Ríos. 186-192 [doi]
- Brdicka curve - A new source of biomarkersLenka Vyslouzilova, Vojtech Adam, Andrea Szabóová, Olga Stepánková, René Kizek, Jiri Anyz. 193-198 [doi]
- Ontology-based functional classification of genes: Evaluation with reference sets and overlap analysisSidahmed Benabderrahmane, Marie-Dominique Devignes, Malika Smaïl-Tabbone, Amedeo Napoli, Olivier Poch. 201-208 [doi]
- A web interface for the quantification of microtubule dynamicsKoon Yin Kong, Adam I. Marcus, Paraskevi Giannakakou, May D. Wang. 209-214 [doi]
- Finding a longest open reading frame of an alternatively spliced geneNeil Moore, Jerzy W. Jaromczyk. 215-222 [doi]
- Multi-source kernel k-means for clustering heterogeneous biomedical dataPiyaphol Phoungphol, Yanqing Zhang. 223-228 [doi]
- Systematic discovery of condition specific Wnt signaling subnetworksSudipto Saha, Rob M. Ewing. 229-234 [doi]
- An improved data integration methodology for system biologyXiaodong Zhou, E. Olusegun George. 235-240 [doi]
- Associating gene functional groups with multiple clinical conditions using Jaccard similarityNoha A. Yousri, Dalal M. Elkaffash. 241-246 [doi]
- Rapid identification of multi-PTMs peptide sequence tags with a graph search approachHui Li, Chunmei Liu, Mugizi Robert Rwebangira, Legand Burge, William M. Southerland. 247-250 [doi]
- Rapid generation of peptide sequence tags with a graph search algorithmHui Li, Chunmei Liu, Mugizi Robert Rwebangira, Legand Burge, William M. Southerland. 251-254 [doi]
- Identifying modular function via edge annotation in gene correlation networks using Gene Ontology searchKathryn Dempsey, Ishwor Thapa, Dhundy Bastola, Hesham H. Ali. 255-261 [doi]
- Integrating sequence conservation features and a domain-domain interaction network to detect disease-associated nsSNPsRui Jiang, Jiaxin Wu. 262-267 [doi]
- Correlation of genomics features with the date and party hub distinction: A view from three dimensional protein structuresHaiying Wang, Huiru Zheng. 268-273 [doi]
- Development and implementation of a novel computational tool for an efficient construction of drug-target interactomeJingchun Sun, Paul Hart, Zhongming Zhao. 274-279 [doi]
- Classifying six glioma subtypes from combined gene expression and CNVs data based on compressive sensing approachWenlong Tang, Hongbao Cao, Ji-Gang Zhang, Junbo Duan, Dongdong Lin, Yu-Ping Wang. 282-288 [doi]
- Random forest: A reliable tool for patient response predictionDavid J. Dittman, Taghi M. Khoshgoftaar, Randall Wald, Amri Napolitano. 289-296 [doi]
- Optimal delivery of volumetric modulated arc therapy (VMAT) for moving targetSairam Behera, Ovidiu Daescu, Lech Papiez. 297-304 [doi]
- An adaptive feature reduction algorithm for cancer classification using wavelet decomposition of serum proteomic and DNA microarray dataSabrina Rashid, Golam Morshed Maruf. 305-312 [doi]
- Ab initio protein structure prediction based on memetic algorithm and 3D FCC lattice modelJyh-Jong Tsay, Shih-Chieh Su. 315-318 [doi]
- Rigid region pairwise sequence alignmentMarko Zivanic, Ovidiu Daescu, Anastasia Kurdia. 319-326 [doi]
- Amino acid encoding schemes for machine learning methodsMasood Zamani, Stefan C. Kremer. 327-333 [doi]
- On the energy of bifurcated hydrogen bonds for protein structure predictionSajal Dash, Jack Snoeyink. 334-337 [doi]
- Encoding protein structure with functions on graphsPromita Bose, Xiaxia Yu, Robert W. Harrison. 338-344 [doi]
- Analysis of relevant physicochemical properties in obligate and non-obligate protein-protein interactionsMina Maleki, Md. Mominul Aziz, Luis Rueda. 345-351 [doi]
- Recursive protein modeling: A divide and conquer strategy for protein structure prediction and its case study in CASP9Jianlin Cheng, Zheng Wang, Jesse Eickholt, Xin Deng. 352-357 [doi]
- Protein docking with information on evolutionary conserved interfacesIrina Hashmi, Bahar Akbal-Delibas, Nurit Haspel, Amarda Shehu. 358-365 [doi]
- Protein conformational search with geometric projectionsBrian S. Olson, S. Farid Hendi, Amarda Shehu. 366-373 [doi]
- The development of a proteomic analyzing pipeline to identify proteins with multiple RRMs and predict their domain boundariesKyung Dae Ko, Chunmei Liu, Mugizi Robert Rwebangira, Legand Burge, William M. Southerland. 374-381 [doi]
- P.R.E.S.S. - An R-package for exploring residual-level protein structural statisticsYuanyuan Huang, Steve Bonett, Andrzej Kloczkowski, Robert L. Jernigan, Zhijun Wu. 382-389 [doi]
- A symmetry-driven BP algorithm for the Discretizable Molecular Distance Geometry ProblemAntonio Mucherino, Carlile Lavor, Leo Liberti. 390-395 [doi]
- Hardware simulation of yeast glycolytic oscillationsJorge E. Duarte, Jaime Velasco-Medina, Pedro A. Moreno. 396-399 [doi]
- Refinement of docked protein complex structures using evolutionary tracesBahar Akbal-Delibas, Irina Hashmi, Amarda Shehu, Nurit Haspel. 400-404 [doi]
- A distance and orientation dependent potential energy function with cluster energyLin Chen, Jing He. 405-409 [doi]
- Normal mode analysis of protein structure dynamics based on residue contact energyWeitao Sun. 410-415 [doi]
- SCOP family fingerprints: An information theoretic approach to structural classification of protein domainsAlberto Casagrande, Francesco Fabris. 416-423 [doi]
- A statistical model of overlapping volume in ligand binding cavitiesBrian Y. Chen, Soutir Bandyopadhyay. 424-431 [doi]
- Using rigidity analysis to probe mutation-induced structural changes in proteinsFilip Jagodzinski, Jeanne Hardy, Ileana Streinu. 432-437 [doi]
- Cluster analysis of MiRNAs microarray data and prediction of lupeol's anti-cancer pathDachuang Liu, Cuihong Dai, Dechang Xu. 440-445 [doi]
- Identifying multiple stem-loops pre-miRNA using support vector machineXiaofeng Song, Minghao Wang, Yi-Ping Phoebe Chen, Ping Han. 446-448 [doi]
- Gene sets enrichment analysis of miRNA expression profileTzu-Hung Hsiao, Hung-I Harry Chen, Patricia C. Sanchez-Diaz, Jaclyn Y. Hung, Yidong Chen, Yufei Huang. 449-454 [doi]
- Topology-based scoring method for identification of responsive protein-protein interaction subnetworkShouguo Gao, Xujing Wang. 457-464 [doi]
- Module detection for bacteria based on spectral clustering of protein-protein functional association networksHongwei Wu, Yaming Lin, Fun Choi Chan, Rocío Alba-Flores. 465-472 [doi]
- Network based subcellular localization prediction for multi-label proteinsM. Mondal Ananda, Jhih-rong Lin, Jianjun Hu. 473-480 [doi]
- VeNet: A framework for the analysis of protein interaction networks through vector space embeddingPietro Hiram Guzzi, Pierangelo Veltri, Mario Cannataro. 481-487 [doi]
- A new functional association-based protein complex predictionMingming Liu, Yanwei Huang, Liqing Zhang, David R. Bevan. 488-494 [doi]
- Using semantic similarity to detect features in yeast protein complexesPietro Hiram Guzzi, Marianna Milano, Pierangelo Veltri, Mario Cannataro. 495-502 [doi]
- A hierarchical link clustering based approach for identifying protein complexes by incorporating core-attachment structureYinhai Liu, Yang Yu, Chengjie Sun, Lei Lin, Xiaolong Wang. 503-508 [doi]
- Evaluation of essential genes in correlation networks using measures of centralityKathryn Dempsey, Hesham H. Ali. 509-515 [doi]
- Indoor signage detection based on saliency map and bipartite graph matchingShuihua Wang, Yingli Tian. 518-525 [doi]
- Finding objects for blind people based on SURF featuresRicardo Chincha, Yingli Tian. 526-527 [doi]
- Identifying medicine bottles by incorporating RFID and video analysisFaiz M. Hasanuzzaman, Yingli Tian, Qingshan Liu. 528-529 [doi]
- Learning from positive and unlabeled documents for automated detection of alternative splicing sentences in medline abstractsYang Chen, Manabu Torii, Chang-Tien Lu, Hongfang Liu. 530-537 [doi]
- Comparison of classification techniques-SVM and naives bayes to predict the Arboviral disease-DengueShameem Fathima, Nisar Hundewale. 538-539 [doi]
- Reduction of periodic motion artifacts from impedance plethysmographySardar Ansari, Ashwin Belle, Kevin Ward, Rosalyn S. Hobson, Kayvan Najarian. 540-547 [doi]
- A hybrid approach for hemorrhage segmentation in pelvic CT scansPavani Davuluri, Jie Wu 0002, Ashwin Belle, Charles H. Cockrell, Yang Tang, Kevin Ward, Kayvan Najarian, Rosalyn Hobson Hargraves. 548-554 [doi]
- A physiological signal processing system for optimal engagement and attention detectionAshwin Belle, Rosalyn S. Hobson, Kayvan Najarian. 555-561 [doi]
- Margin-maximized redundancy-minimized SVM-RFE for diagnostic classification of mammogramsSaejoon Kim. 562-569 [doi]
- Towards an environment for data mining based analysis processes in bioinformatics & personalized medicineDennis Wegener, Simona Rossi, Francesca Buffa, Mauro Delorenzi, Stefan Riiping. 570-577 [doi]
- Application of density estimation algorithms in analyzing co-morbidities of migraineMeng-Han Yang, Yen-Jen Oyang, Jong-Ling Fuh. 578-585 [doi]
- Extracting biomedical concepts from fulltext by relative importance in a graph modelMin Song, Said Bleik, Hwanjo Yu, Wook-Shin Han. 586-593 [doi]
- A ROI-based algorithm for the classification of PET neuroimagesPatrizia Vizza, Pierangelo Veltri, Giuseppe Lucio Cascini. 594-595 [doi]
- 3D point cloud sensors for low-cost medical in-situ visualizationAlessio Pierluigi Placitelli, Luigi Gallo. 596-597 [doi]
- GLASS: Genomic Literature Area Sequence SearchSiddharth Pandey, Michael D. Kane, John A. Springer. 598-599 [doi]
- Fracture detection and quantitative measure of displacement in pelvic CT imagesJie Wu 0002, Pavani Davuluri, Ashwin Belle, Charles H. Cockrell, Yang Tang, Kevin Ward, Rosalyn S. Hobson, Kayvan Najarian. 600-606 [doi]
- An initial study of full parsing of clinical text using the Stanford ParserHua Xu, Samir AbdelRahman, Min Jiang, Jung-Wei Fan, Yang Huang. 607-614 [doi]
- An enhanced graph-oriented approach for change management in distributed biomedical ontologies and linked dataArash Shaban-Nejad, Volker Haarslev. 615-622 [doi]
- Detection of lobular carcinoma in situ(LCIS) by image analysisSujin Kim, Desok Kim, Hyun-Joo Choi, Hee Jae Joo. 623-624 [doi]
- Dealing with reusability and reproducibility for scientific workflowsSérgio Lifschitz, Luciana Gomes, Stevens K. Rehen. 625-632 [doi]
- A framework for designing compliance conform processes in clinical trialsJörg W. Schlundt, Stefan Jablonski. 633-634 [doi]
- Semi-automatic epilepsy spike detection from EEG signal using Genetic Algorithm and Wavelet transformZainab Haydari, Yanqing Zhang, Hamid Soltanian-Zadeh. 635-638 [doi]
- Bayesian network model for diagnosis of Social Anxiety DisorderZakiyeh Shojaei Estabragh, Mohammad Mansour Riahi Kashani, Farnaz Jeddi Moghaddam, Simin Sari, Koosha Sadeghi Oskooyee. 639-640 [doi]
- Development of glandular shape analysis for computer aided detection of prostatic cancer in hematoxylin-stained histologic slidesIlma Andayana, Desok Kim, William J. Howat, Hayley C. Whitaker, Mark Gregson. 641-642 [doi]
- Lessons learned in improving the adoption of a real-time NLP decision support systemYang Huang, Daniel Zisook, Yunan Chen, Michael Selter, Paul Minardi, John Mattison. 643-648 [doi]
- Using a feedback system to enhance chart note quality in Electronic Health RecordsKing-Ip (David) Lin, Vivek Datla, Linda Morrison, Max M. Louwerse. 649-654 [doi]
- A smart context-aware mobile monitoring system for heart patientsGiovanna Sannino, Giuseppe De Pietro. 655-695 [doi]
- Genomic profiling by machine learningZhiping Zhang, Honghuang Lin. 662-668 [doi]
- Classification of poor contrast mammograms using a novel and fast boundary detection techniqueArpita Das, Partha P. Goswami, Susanta Sen, Mahua Bhattacharya. 669-676 [doi]
- A cDNA microarray for rapid and economical identification of HLA profiles of individualsGuanglan Zhang, Ellis L. Reinherz, Derin B. Keskin, Vladimir Brusic. 677-679 [doi]
- Probe design optimization of HLA microarray: Data cleaning of probe signals from cDNA tiling microarray: Outlier detection, noise reduction, and identification of uninformative probes in HLA typing applicationEsma Dilek, Tanya Zlateva, Guanglan Zhang, Lubomir T. Chitkushev, Jae Young Lee, Vladimir Brusic. 680-682 [doi]
- Visualization tools for presenting and analysis of global landscapes of vaccine targetsSuresh Kalathur, Vladimir Brusic, Guanglan Zhang, Lubomir T. Chitkushev, Tanya Zlateva. 683-688 [doi]
- CUDA-LR: CUDA-accelerated logistic regression analysis tool for gene-gene interaction for genome-wide association studySungyoung Lee, Min-Seok Kwon, Ik-Soo Huh, Taesung Park. 691-695 [doi]
- A hybrid Bayesian Network/Structural Equation Modeling (BN/SEM) approach for detecting physiological networks for obesity-related genetic variantsChristine W. Duarte, Yann C. Klimentidis, Jacqueline J. Harris, Michelle Cardel, Jose R. Fernandez. 696-702 [doi]
- GWAS-GMDR: A program package for genome-wide scan of gene-gene interactions with covariate adjustment based on multifactor dimensionality reductionMin-Seok Kwon, Kyunga Kim, Sungyoung Lee, Wonil Chung, Sung-Gon Yi, Junghyun Namkung, Taesung Park. 703-707 [doi]
- A chi-square test for detecting multiple joint genetic variants in genome-wide association studiesIk-Soo Huh, Sohee Oh, Taesung Park. 708-713 [doi]
- Robust analysis of related samples under the presence of population substructureSungkyoung Choi, Sungho Won. 714-720 [doi]
- Variations in edge betweenness measure for gene regulatory networksRauf Ahmed Shams Malick, Nasir Touheed. 721-724 [doi]
- Gene-gene interaction analysis for the survival phenotype based on the standardized residuals from parametric regression modelsSeungyeoun Lee, Jinseok Oh, Min-Seok Kwon, Taesung Park. 725-729 [doi]
- A randomized, controlled study of efficacy and safety on mild to moderate insomnia intervened by Chinese medicine in the integrated programYan Li, Biyun Xu, Shuhui Chen, Peng Liu, Aihua Ou, Yan Xu, Zehuai Wen, Biyang Ou, Ruiyu Xu, Zhaozhang Wei, Liang Zeng. 732-739 [doi]
- Liver targeting effect of vinegar-baked Radix Bupleuri on oxymatrine in miceRui-Zhi Zhao, You-jun Chen, Jian-xiong Cai. 740-745 [doi]
- A data mining research method based on the concept of evidence based TCM inheritance in famous veteran TCM doctors' personal medical recordsYing-rong Lao, Qiu-zhi Gu, Zhao-hui Liang, Ding-ying Tan, Yu-peng Fan, Shu-chun Li, Zhimin Yang, Yan Li. 746-748 [doi]
- An accuracy comparison between two methods of double data entry in Chinese medicine researchShao-nan Liu, Xiao-yan Li, Chuan-jian Lu, Ze-huai Wen, Xin-feng Guo. 749-751 [doi]
- Improvement of Qing Nao Tong Luo recipe on learning and memory impairment in senile dementia ratsJingbo Sun, Rong Hua, Zijun Hou, Yinzhe Gui, Yan Huang. 752-756 [doi]
- Analysis of the indications of empirical prescription in TCM based on association rulesZhimin Yang, Jiamin Yuan, Chunhua Huang, Li Huang, Xiaobo Yang, Heng Weng. 757-759 [doi]
- A kernel-decision tree based algorithm for outcome prediction on acupuncture for neck pain: A new method for interim analysisZhaohui Liang, Gang Zhang, Shujun Xu, Aihua Ou, Jianqiao Fang, Nenggui Xu, Wenbin Fu. 760-764 [doi]
- The Traditional Chinese Medicine syndromes of psoriasis in Chinese patients: Contribution of demographic and clinical variablesZehui He, Chuanjian Lu, Aihua Ou. 765-768 [doi]
- Classification of lip color based on multiple SVM-RFEJingjing Wang, Xiaoqiang Li, Huafu Fan, Fufeng Li. 769-772 [doi]
- Study on infrared radiation characteristic of heat-sensitive acupoints in bronchial asthmaNing Tian, Bing-xi, Bi-Ying Su, Ri-Xin Chen. 773-777 [doi]
- Constructing data mining model of five viscera correlation theory of Myasthenia Gravis based on rough set and association rulesFengbin Liu, Zhengkun Hou, Lijuan Li, Rui Luo. 778-783 [doi]
- Application of data mining technology in excavating prevention and treatment experience of infectious diseases from famous herbalist doctorsYi Luo, Ji-Qiang Li, Dan-Wen Zheng, Zhan-Peng Tan, Hong Zhou, Qing-Ping Deng, Yuntao Liu, Ai-hua Ou, Jian Yin. 784-790 [doi]
- YinYang bipolar atom and quantum cellular automation - A unificationWen-Ran Zhang. 791-797 [doi]
- Lifted wavelet transforms with application to human pulse identificationKunbao Cai, Long Wan, Decheng Luo. 798-802 [doi]
- A preliminarily analysis of TCM-syndrome distribution of ectopic pregnancy surgery inpatientsLi-xing Cao, Qing-qing Zhou, Ai-hua Ou, Yan-xin Chen, Zhi-Qiang Chen, Hao Chen, Xiao-dan Li. 803-806 [doi]
- Effects of Yinxieling-optimization-decoction in treating psoriasis in mouse psoriasis modelsLing Han, Jinghong Yu, Buqing Lou, Ruizhi Zhao, Chuanjian Lu. 807-810 [doi]
- Exploring the biological basis of deficiency pattern in rheumatoid arthritis through text miningGuang Zheng, Miao Jiang, Cheng Lu, Hongtao Guo, Junping Zhan, Aiping Lu. 811-816 [doi]
- Diagnosis based on decision tree and discrimination analysis for chronic hepatitis b in TCMXiaoyu Chen, Lizhuang Ma, Na Chu, Yiyang Hu. 817-822 [doi]
- Construction of semantic analysis system for Traditional Chinese Medicine unstructured medical recordsHeng Weng, Chuanliang Yi, Yingzi Lin, Yuping Zeng, Yang Li, Siliang Wu, Dacan Chen, Haoyang Fu. 823-828 [doi]
- A clinical outcome evaluation model with local sample selection: A study on efficacy of acupuncture for cervical spondylosisZhong Di, Hong-Lai Zhang, Gang Zhang, Zhaohui Liang, Li Jiang, Jianhua Liu, Wenbin Fu. 829-833 [doi]
- TCM syndromes diagnostic model of hypertension: Study based on Tree Augmented Naive BayesWen-wei Ouyang, Xiao-zhong Lin, Yi Ren, Yi Luo, Yuntao Liu, Jia-min Yuan, Ai-hua Ou, Guo-Zheng Li. 834-837 [doi]
- Analysis of functional status of Meridians in different types of TCM constitutionYan-zhao Lin, Zhi-min Yang, Lei Guo, Zi-jian Wu, Ai-hua Ou, Zi-yi Ye. 838-842 [doi]
- Ensemble learning for synthesis of the four diagnostics of TCMNa Chu, Lizhuang Ma, Xiaoyu Chen, Zhiying Che, Yiyang Hu. 843-847 [doi]
- Biclustering binary data and its application in traditional Chinese MedicineXiao-hua Xu, Lin Lu, Ping He, Zhou-Jin Pan, Lin Chen. 848-853 [doi]
- Balance-bagging-PRFS algorithm for feature optimization on insomnia data intervened by traditional Chinese MedicineXiao Bo Yang, Shi-xing Yan, Zheng-yang Zhou, Guo-Zheng Li, Yan Li, Xin-feng Guo. 854-857 [doi]
- Application of Conditional Logistic Regression method in a prospective effectiveness comparative study among patients with Acute Ischemic StrokeJianxiong Cai, Yuanqi Zhao, Xianping Guo, Min Zhao, Yubo Lu, Ruizhi Zhao, YeFeng Cai, Darong Wu. 858-861 [doi]
- The model of high-order multidimensional tree with tristate applied to the digitalization of Yin-Yang theory of Traditional Chinese MedicineZhiwei Liang, Lingli Wang, Xiaoping Lai, Zhiwei Liang, Yanhua Li, Yongyun Wang, Zuye Liang. 862-867 [doi]
- Analysis of herbal formulation in TCM: Infertility as a case studySimon K. Poon, Kei Fan, Josiah Poon, Clement Loy, Kelvin Chan, Paul W. Kwan, Xuezhong Zhou, Junbin Gao, Runsun Zhang, Yinghui Runshun, Daniel Man-yuen Sze. 868-872 [doi]
- Research on data mining methods for organoleptic determination of Amomum villosum productWen-Guang Zhao, Chao-fan Yu, Ruo-Ting Zhan, Rui He. 873-880 [doi]
- Research on the clinical classification of Xi clan diabetic foot using fuzzy C-means clustering methodYemin Cao, Haowei Zhang, Hongtao Xu, Jiuyi Xi, Xunsheng Zhu, Zheng Gu. 881-885 [doi]
- Research on temperature field in simulated living-porcine liver tissue irradiated by laserXunsheng Zhu, Qilin Deng, Qunchao Wang, Jiafu Zhang, Jie Yuan, Yemin Cao, Zheng Gu. 886-889 [doi]
- Co-evolutionary genetic algorithm in symptom-herb relationship discoveryJosiah Poon, Dawei Yin, Simon K. Poon, Xuezhong Zhou, Runshun Zhang, Baoyan Liu, Daniel Man-yuen Sze. 890-894 [doi]
- Pressure ulcer monitoring and intervention: A software platformMasoud Farshbaf, Sarah Ostadabbas, Rasoul Yousefi, Mehrdad Nourani, Matthew Pompeo. 897-898 [doi]
- BioDB: Integration of biological knowledgebasesJacqueline Gerhart, Ahmet Sacan. 899 [doi]
- System dynamics modeling of childhood obesityBehrouz Madahian, Lisa Klesges, Ramin Homayouni. 900 [doi]
- Using unified famous objects (UFO) to automate Alzheimer's disease diagnosticsMichael N. Gubanov, Linda G. Shapiro. 901-903 [doi]
- Bio-signal procssor platform system for array sensorsDonghoon Lee, Seungpyo Jung, Youngju Park, Jingzhe Xu, JuSung Park. 904-906 [doi]
- Domain-domain interactions in obligate and non-obligate protein-protein interactionsMina Maleki, Luis Rueda. 907-908 [doi]
- Optimization of turn-back primers in isothermal amplificationYasumasa Kimura, Michiel J. L. de Hoon, Shintaro Aoki, Yuri Ishizu, Carsten O. Daub, Alexander Lezhava, Erik Arner, Yoshihide Hayashizaki, Yuki Kawai, Yasushi Kogo. 909-911 [doi]
- Medicago truncatula gene regulatory network prediction serverMingyi Wang, Yinbeing Ge, Ji He. 912-914 [doi]
- Modular neural network model based foetal state classificationShivajirao Jadhav, Sanjay Nalbalwar, Ashok Ghatol. 915-917 [doi]
- Improved compression ratio for model-based ECG compression using differential codingZahra Passand, Mahdi Azarnoosh. 918 [doi]
- A comparative study of text classification approaches for personalized retrieval in PubMedSachintha Pitigala, Cen Li, Suk Jai Seo. 919-921 [doi]
- Generative/discriminative models for nucleosome positioningYu Zhang, Xiuwen Liu. 922-924 [doi]
- Adaptive multi-scaled simulation algorithm for biochemical reaction in complex systemsJesse Turner, Lin Ji, Dennis Cox. 925-927 [doi]
- Analysis of the indications of empirical prescription in TCM based on association rulesZhimin Yang, Jiamin Yuan, Chunhua Huang, Li Huang, Xiaobo Yang, Heng Weng. 928 [doi]
- Implications of observation-fact modifiers to i2b2 ontologiesJack W. London, Devjani Chatterjee. 929-930 [doi]
- Detection of paroxysmal atrial fibrillation subjects based on circadian rhythm parameters of heart rate variabilityAditi Olemann, Desok Kim. 931-934 [doi]
- Joint analysis of host and pathogen genomesIstvan Bartha, Amalio Telenti, Viktor Müller, Jacques Fellay. 935 [doi]
- Genome3D: A viewer-model framework for integrating and visualizing multi-scale epigenomic information within a three-dimensional genomeWilliam Arndt, Thomas M. Asbury, W. Jim Zheng, Matt Mitman, Jijun Tang. 936-938 [doi]
- Function prediction for in silico protein mutagenesis using transduction and active learningNada Basit, Harry Wechsler. 939-940 [doi]
- Genome-wide identification of TF-miRNA regulatory networks in myogenesisLeina Lu, Liang Zhou, Eric Z. Chen, Kun Sun, Peiyong Jiang, Susie Su, Lijun Wang, Hao Sun, Huating Wang. 941 [doi]
- A computer aided for image processing of computed tomography in hepatocellular carcinomaWei Tai Hsu, Jia-Rong Yeh, Yi-Chung Chang, Men-Tzung Lo, Yi-Hsien Lin. 942-944 [doi]
- Application of stochastic resonance for imaging enhancement of computed tomography in hepatocellular carcinomaJia-Rong Yeh, Wei Tai Hsu, Yi-Chung Chang, Men-Tzung Lo, Yi-Hsien Lin. 945-947 [doi]
- Gene expression regulation during differentiation from murine ES cells due to microRNAMasato Yoshizawa, Y.-h Taguchi. 948-949 [doi]
- Protein binding prediction using non-metric multidimensional scaling methodHiromu Mogi, Y.-h. Taguchi. 950-952 [doi]
- Tissue specific methylation and genotypeRyoichi Kinoshita, Y.-h. Taguchi. 953-955 [doi]
- Clinical network for case based reasoning methodologyHee-Jeong Jin, Eun Soo Jang, Si-Woo Lee. 956-957 [doi]
- Identification of CpG islands in DNA sequences using supervised classificationB. S. Raghavendra, Ajit S. Bopardikar. 958-960 [doi]
- Principal component analysis for bacterial proteomic analysisY.-h. Taguchi, Akira Okamoto. 961-963 [doi]
- Feature extraction for discriminance of symbiotic/parasitic bacterial type III effector protein using principal component analysisYuichi Nakano, Y.-h. Taguchi. 964-965 [doi]
- Magnetic resonance angiography study of a normal mouse brain for creating a three-dimensional cerebral vasculature atlas and software for labeling vesselsRajeshree Joshi, Nathan Yanasak. 966-968 [doi]
- Integration of statistical models and visualization tools to characterize microRNA networks influencing cancerKristin R. Delfino, Sandra L. Rodriguez-Zas. 969-971 [doi]
- Analysis of uterine contraction signalsKemal Aydin. 972 [doi]
- Interaction simulation of Lipoxygenase with arachidonate acid using NAMDZhongwei Li, Ebrahim Khosravi, Shuju Bai. 973 [doi]
- Docking arachidonic acid into human 5/12-lipoxygenase using ICMMingmin Bai, Ebrahim Khosravi, Shuju Bai. 974 [doi]
- Additive and multiplicative genome-wide association models identify genes associated with growthCynthia Zavala, Nicola V. L. Serao, Maria B. Villamil, Gustavo Caetano-Anollés, Sandra L. Rodriguez-Zas. 975-977 [doi]
- Hierarchical modeling of alternative exon usage associations with survivalAhmed Sadeque, Nicola V. L. Serao, Bruce R. Southey, Zeeshan Fazal, Sandra L. Rodriguez-Zas. 978-980 [doi]
- An approach to phylogenomic analysis of bacterial pathogensLeonid Zaslavsky, Vyacheslav Chetvernin, Dmitry Dernovoy, Boris Fedorov, William Klimke, Alexandre Souvorov, Igor Tolstoy, Tatiana A. Tatusova, David J. Lipman. 981 [doi]
- Comparison of tandem mass spectrometry search methods to identify neuropeptidesMalik N. Akhtar, Bruce R. Southey, Kenneth I. Porter, Jonathan V. Sweedler, Sandra L. Rodriguez-Zas. 982-984 [doi]
- Integration of polygenic and individual SNP effects in genome-wide association analysesNicola V. L. Serao, Jonathan E. Beever, D. B. Faulkner, Sandra L. Rodriguez-Zas. 985-987 [doi]
- Integration of sequence and functional information to identify and annotate neuropeptides in the pig genomeKenneth I. Porter, Bruce R. Southey, Malik N. Akhtar, Jonathan V. Sweedler, Sandra L. Rodriguez-Zas. 988-990 [doi]
- Assembly of low-energy protein conformations with heterogeneous fragmentsKevin Molloy, Amarda Shehu. 991-993 [doi]
- Model of ion intensity from tandem mass spectra for improved peptide identification and simulationZ. Fazal, B. R. Southey, A. Sadeque, J. V. Sweedler, S. L. Rodriguez-Zas. 994-996 [doi]
- Genetic information for chronic disease predictionMichael A. Grasso, Darshana Dalvi, Soma Das, Matthew Gately, Vlad Korolev, Yelena Yesha. 997 [doi]
- An accurate and reliable method for automatic picking of HIV/SIV spikesChaity B. Mukherjee, Hanspeter Winkler, Xiuwen Liu, Moumita Dutta, Kenneth H. Roux, Kenneth A. Taylor. 998-1000 [doi]
- A pilot study of a predicate-based vector space model for a biomedical search engineMyungjae Kwak, Gondy Leroy, Jesse D. Martinez. 1001-1003 [doi]
- A genetic algorithms approach to the inference of cis-regulatory modulesDavid J. Gagne, Clare Bates Congdon. 1004 [doi]
- Using genetic algorithms for the inference of motifs that are represented in only a subset of sequences of interestJeffrey A. Thompson, Clare Bates Congdon. 1005 [doi]
- Development of three dimensional binary patterns for local bone structure analysisAshwini Kumar Mishra, Desok Kim, Ilma Andayana. 1006-1008 [doi]
- Integration of statistical models and visualization tools to characterize microRNA networks influencing cancerJames Karnia, Kristin R. Delfino, Maria B. Villamil, Gustavo Caetano-Anollés, Sandra L. Rodriguez-Zas. 1009-1011 [doi]
- The analysis of DNA shuffling by nMDSRyota Doi, Y.-h. Taguchi. 1012-1013 [doi]
- Early detection of Alzheimer's based on intrinsic measurementsPrabesh Kanel, Xiuwen Liu, Washington Mio. 1014-1016 [doi]
- Reconstruction of gene regulatory networks by stepwise multiple linear regression from time-series microarray dataYiqian Zhou, Jacqueline Gerhart, Ahmet Sacan. 1017-1019 [doi]
- E. coli and Agrobacterium non-coding regulatory RNA discoveryHyejin Cho, Hui-Hsien Chou. 1020-1022 [doi]
- The functional make up of proteomes is remarkably conservedArshan Nasir, Aisha Naeem, Muhammad Jawad Khan, Horacio Daniel Lopez-Nicora, Gustavo Caetano-Anollés. 1023-1025 [doi]
- Infrastructure for sharing standardized clinical brain scans across hospitalsTheo G. M. van Erp, Ann L. Chervenak, Carl Kesselman, Mike D'Arcy, Janet Sobell, David B. Keator, Lisa Dahm, Jim Murry, Meng Law, Anton Hasso, Joseph Ames, Fabio Macciardi, Steven G. Potkin. 1026-1028 [doi]
- Evolution of protein architectures inferred from phylogenomic analysis of CATHS. A. Bukhari, Gustavo Caetano-Anollés. 1029-1031 [doi]
- Literature based Bayesian analysis of gene expression dataLijing Xu, Ramin Homayouni, E. Olusegun George. 1032 [doi]
- Weighted pooling high-throughput gene expression data sets to maximize the functional coherence of the top rank genesXiaodong Zhou, E. Olusegun George. 1033 [doi]
- Quality assessment of LC-MS metabolomic dataMohammad R. Nezami Ranjbar, Yue Joseph Wang, Habtom W. Ressom. 1034-1036 [doi]
- Analysis of aberrant pathways using HCC candidate biomarkers identified from high-throuput omics studiesJinlian Wang, Habtom W. Ressom. 1037-1038 [doi]
- Identifying smoking associated gene co-expression networks related to oral cancer initiationJie Zhang, Thomas Knobloch, Jeffrey D. Parvin, Christopher Weghorst, Kun Huang. 1039-1041 [doi]
- Predicting Parkinson's disease related genes using frequent gene co-expression analysisJie Zhang, Shiwei Ni, Jeffrey D. Parvin, Yufeng Yang, Kun Huang. 1042-1044 [doi]
- Comprehensive investigation of connectivity map data-towards a drug mode of action network for personalized thnerapyChifeng Ma, Yufei Huang, Huang-I. Harry, Yidong Chen. 1045-1047 [doi]
- iQuant: A fast yet accurate GUI tool for transcript quantificationTin Chi Nguyen, Nan Deng, Guorong Xu, Zhansheng Duan, Dongxiao Zhu. 1048-1050 [doi]
- SPATA: A highly accurate GUI tool for de novo transcriptome assemblyTin Chi Nguyen, Zhiyu Zhao, Dongxiao Zhu. 1051-1053 [doi]
- Reconstruction of gene regulatory networks using state space modelXi Wu, Nan Wang, Chaoyang Zhang, Ping Gong. 1054-1056 [doi]
- A parallel programming framework with Markovian messaging for LC-MS peptide detectionZhenghao Zhang, Youting Sun, Ulisses Braga-Neto, Edward R. Dougherty, Jianqiu Zhang. 1057-1059 [doi]
- An array-CGH based analyzing tool for detecting unknown copy number variationKwang Su Jung, Jongpill Choi, Kiejung Park. 1060 [doi]
- A software package for next-gen bisulfite sequencing data analysisJeong-Hyeon Choi, Dong-Sung Ryu, Suhas Sureshchandra, Huidong Shi, Hwan-Gue Cho. 1061-1062 [doi]
- Integrating a partial least squares model with an artificial neural network to discriminate FTIR spectra of virus infected vero cells at 6 hours post exposureJohn A. Ward, Chadi Filfili, Ruli Wang, Gary Hastings, Jing Guo, Yu-Sheng Hsu, David Katz, Julia K. Hilliard. 1063-1065 [doi]
- Mining fetal magnetocardiogram data for high-risk fetusesDallas Snider, Xiaowei Xu. 1066-1068 [doi]