Abstract is missing.
- Long spaced seeds for finding similarities between biological sequencesLucian Ilie, Silvana Ilie. 3-8
- A Two-stage Approach to Finding Common Structure Elements in Unaligned RNA SequencesChiyang Huang, Yuh-Jyh Hu. 9-15
- A Flexible Algorithm for Pairwise Protein Structure AlignmentZhiyu Zhao, Bin Fu. 16-22
- Potential Use of Graph Theoretical Properties of Protein Structures in Structural AlignmentAlper Küçükural, Osman Ugur Sezerman. 23-30
- Identification of cis-Regulatory Elements from Cross-Genome Comparison and Gene Expression Profile AnalysisAmitava Karmaker, Stephen Harris, Stephen Kwek. 31-36
- A Knowledge-based Dynamic Bayesian Framework Towards Molecular Network Modeling and Quantitative PredictionRui Chang, Martin Stetter. 37-43
- Learning Node Replacement Graph Grammars in Metabolic PathwaysJacek P. Kukluk, Chang Hun You, Lawrence B. Holder, Diane J. Cook. 44-50
- Constrained Estimation of Genetic NetworksHao Xiong, Yoonsuck Choe. 51-57
- General Methodology for Metabolic Pathways Modeling and Simulation Using Discrete Event Approach. Example on Glycolysis of YeastThierry Antoine-Santoni, Fabrice Bernardi, François Giamarchi. 58-64
- Inferring Gene Regulatory Networks from Microarray Data Based on Transcription Factor Analysis and Conditional IndependencyShih-Wu Cheng, Hsiang-Yuan Yeh, Yu-Chun Lin, Shih-Fang Lin, Von-Wun Soo. 65-71
- Aldose Reductase and Nitric Oxide Synthase Role in Diabetic Retinopathy: A Bioinformatics StudyHanuman Thota, Nageswara rao Kunjam, Suresh Babu Changalasetty, Allam Appa Rao, Ramachandra Sridhar Gumpeny, Undurti N. Das, Reddi Kirankumar, T. K. Rama Krishna Rao. 72-75
- Analyzing and Dynamic Modeling of Molecular Interactions Networks Based on Multi-agent SystemsInes Hamdi, Imed Riadh Farah, Mohamed Ben Ahmed. 76-82
- Towards a Serum-free Culture Medium: Identifying Human Growth Receptors and Signaling Pathways that Regulate Cell Proliferation in Human Mesenchymal Stem Cells (MSCs)Nicholas Xue Wei Tan, Felicia Soo Lee Ng, Vivek Tanavde. 83-90
- Interrelationship Between Protein Electrostatics and Evolution in HCV and HIV Replicative ProteinsChristopher M. Frenz. 91-97
- Towards Phylogenomic ReconstructionLe Vinh, Andres Varon, Daniel Janies, Ward Wheeler. 98-104
- A Parallel Algorithm to Cluster Orthologous Protein across Phylogenetic GenomesSunshin Kim, Chungsei Rhee, Jungdo Choi. 105-112
- Bayesian Biclustering of Microarray DataJiajun Gu, Jun S. Liu. 113-120
- MIAME-Compliant Microarray Data Integrated SystemMarie-Michèle Cordonnier-Pratt, Virgil Johnson, Dmitri Kolychev, Chun Liang, Junfeng Qu, Feng Sun, Zheng Xia, Lee H. Pratt. 121-126
- Combining Gene Expression and Transcription Factor Regulation Data using Simultaneous Nonnegative Matrix FactorizationLiviu Badea. 127-131
- Stability-Based Dimension Estimation of ICA with Application to Microarray Data AnalysisChen Wang, Jianhua Xuan, Ting Gong, Robert Clarke, Eric P. Hoffman, Yue Wang. 132-138
- GO Based Inference of Gene Regulatory Networks from Gene Expression DataKumar Abhishek, Harish Karnick. 139-145
- Error Correction and Clustering Gene Expression Data Using Majority Logic DecodingHumberto Ortiz-Zuazaga, Sandra Peña de Ortiz, Oscar Moreno de Ayala. 146-152
- Finding Alternative Splicing Patterns with Strong Support From Expressed SequencesThomas K. F. Wong, Tak Wah Lam, W. L. Yang, Siu-Ming Yiu. 153-158
- Prediction of trans-antisense Transcripts in Arabidopsis thalianaHuan Wang, Nam-Hai Chua, Xiu-Jie Wang. 159-162
- Estimating Microbial Population Densities Based on Genomic SignaturesYijun Sun, Fanhong Yu, Li Liu, William G. Farmerie. 163-168
- A novel approach to high throughput microbial genome finishing: Incorporation of 454 sequence data for gap closure in low quality Sanger dataAvinash Kewalramani, Riley Arnaudville, Cliff Han, Olga Chertkov, Thomas S. Brettin. 169-174
- PRAP: An Automated de novo Repeat Finder Pipeline Parkoyotic GenomesGwo-Liang Chen. 175-180
- Targetability and Orthology of Human Disease GenesMeena K. Sakharkar, Kishore R. Sakharkar. 181-187
- Analysis Software for High-density Pooled Genotyping DataWaibhav Tembe, Nils Homer, Sotiris Mitropanopoulos, Mitchell Storey, Szabolcs Szelinger, Marcel Brun, Matthew J. Huentelman, Edward Suh, Dietrich A. Stephan, James Lowey, John V. Pearson, David W. Craig. 188-194
- Biomarker Discovery Across Annotated and Unannotated Microarray Datasets Using Semi-Supervised LearningCole Harris, Noushin Ghaffari. 195-200
- Identification of the Synechococcus sp. IU 625 Metallothionein Gene and its Evolutionary Relationship to the Metallothionein Gene of Other CyanobacteriaTin-Chun Chu, Lee H. Lee, John J. Gaynor, Quinn C. Vega, Bonnie K. Lustigman, Shankar Srinivasan. 201-207
- A Workflow to Discover Regulatory Motifs with Positional Bias in Human PromotersYunkai Liu, Sujuan Ye, Asai Asaithambi. 208-213
- An Approach for Analyzing DNA Copy Number Aberrations in Genome Using aCGH ProfilesAmitava Karmaker, Stephen Kwek. 214-217
- Orthology and Multiple Class Prediction of Functional Elements in the Human GenomeMary Qu Yang, Laura Elnitski. 218-228
- Predicting Breast Cancer Metastasis by Integrating Both Clinical and Genetic MarkersYijun Sun, Steve Goodison. 229-235
- A Generalized Framework for Pathosystems Informatics & Bioinformatics Web ServicesTian Xue, Boyu Yang, Rebecca Will, Bruce Sharp, Ron Kenyon, Oswald Crasta, Bruno W. S. Sobral. 236-242
- Intelligent Assistive Feeding Device for Phisically HandicappedRahul Pandhi, Sumit Khurana, Rajesh Rohilla, Pradeep Khanna. 243-247
- An Interval Tree Based Feature Reduction Method For Cancer Classification Using High-Throughput DNA Copy Number DataSiling Wang, Yuhang Wang, Luc Girard, Young Kim, Jonathan R. Pollack, John D. Minna. 248-255
- Requirements and System Architecture for a Decision Support System for the treatment of Colorectal CancerGhasem Zaefarian, Jawed I. A. Siddiqi, Babak Akhgar, Alicja Gruzdz, Aleksandra Ihnatowicz. 256-262
- An Ontologically Driven Decision Support System for Colorectal Caner Treatment: Data Relevance and Model IntegrationBabak Akhgar, Jawed I. A. Siddiqi, Alicja Gruzdz, Aleksandra Ihnatowicz, Ghasem Zaefarian. 263-268
- Analysis of Headache Disease Data By Neural NetworksAlper Kursat Uysal, Ali Gunes, Ahmet Babanli. 269-274
- Design & Implementation of CPLD Controller for Bi-directional VGA Capsule EndoscopJyung Hyun Lee, Yeon Kwan Moon, Sang Hyo Woo, Chang Wook Kim, Hee Joon Park, Jong Sik Jin, Chul-Ho Won, Hyun Chul Choi, Yoon Nyun Kim, Jin-Ho Cho. 275-281
- The 2007 World Congress in Computer Science, Computer Engineering, and Applied Computing Invited Banquet Keynote Lecture: Using Bioinformatics and Machine Learning to Predict Potential MalignanciesJack Y. Yang, Mary Qu Yang. 282-288
- Use of Average Mutual Information based Species Signature for Fungal and Mycobacterial DifferentiationKhalid Sayood, Dhundy Bastola, Peter Iwen, Steven H. Hinrichs. 289-295
- A Genetic Programming Approach for Classification of the Spontaneous Termination of Atrial FibrillationOlga Valenzuela, Fernando Rojas Ruiz, Ignacio Rojas Ruiz, Maria del Mar Cepero, Francisco Javier Rojas. 296-300
- The Construction of Observational Heterarchy on One-Dimensional Map SystemKohei Nakajima, Soya Shinkai. 301-308