Table of Contents

• The Brain Watching Itself: Identifying Brain Tumors with Spiking Neural NetworksNamita Achyuthan, Bhaskarjyoti Das. 1-7 [doi]
• Event-based Detection of Obstructive Sleep Apnea via YOLOv8 Nano and ECG Spectrograms: Integration with Home Sleep Apnea Test and Edge ComputingPonpatcharee Nipattanon, Che-Wei Lin. 1-7 [doi]
• Self-Attention Enhanced Deep Learning Models for Immune Cell Deconvolution from Bulk RNA-SeqChia-Ru Chung, Yen-Lin Chen, Yun Tang, Justin Bo-Kai Hsu, Li-Ching Wu, Tzong-Yi Lee, Jorng-Tzong Horng. 1-8 [doi]
• Helicobacter Pylori Infection Diagnosis from Endoscopic Images via Multi-Class Token based Multiple Instance LearningWei-Te Ting, Yu-Ching Tsai, Chun-Rong Huang, Hsiu-Chi Cheng, Bor-Shyang Sheu. 1-8 [doi]
• Explainable AI-Enhanced Kinase Activity Profiling Through PhosphoproteomicsChia-Ru Chung, Ming-Feng Ho, Yun Tang, Li-Ching Wu, Justin Bo-Kai Hsu, Tzong-Yi Lee, Jorng-Tzong Horng. 1-8 [doi]
• Improving the Efficiency and the Validity of Molecular TransformersLeone Bacciu, Matteo Grazioso, Silvia Multari, Francesca Grisoni, Angelica Mazzolari, Marco S. Nobile. 1-9 [doi]
• Spiking Neural Networks for Mental Workload Classification with a Multimodal ApproachJiahui An, Sara Irina Fabrikant, Giacomo Indiveri, Elisa Donati. 1-8 [doi]
• Drowsiness Detection based on Continuous State Transitions from Alertness to Sleep using Forehead EEGTsung-Hao Hsieh, Ting-Yu Chen, Sheng-Fu Liang. 1-5 [doi]
• Assessing Cardiac Functionality by Means of Interpretable AI and Myocardial StrainMarco S. Nobile, Amalia Lupi, Leone Bacciu, Matteo Grazioso, Chiara Gallese, Emilio Quaia, Alessia Pepe. 1-9 [doi]
• iACP-KAN: Identifying Anticancer Peptides using Kolmogorov-Arnold NetworkThanh-Hoang Nguyen-Vo, Zheng Li, Quang H. Trinh, Huu-Thanh Duong, Trang T. T. Do 0001, Binh P. Nguyen. 1-7 [doi]
• miSAM: Robust MicroRNA Expression Estimation Using Bi-Objective Evolutionary Learning Algorithm in Cancer TranscriptomicsYann-Lin Ho, Yann-Jen Ho, Shinn-Ying Ho, Tzong-Yi Lee. 1-8 [doi]
• Vertebral compression Fracture Risk in Spinal Metastases Patients Following Stereotactic Body Radiotherapy Using Quantitative Imaging Data and Machine LearningDawit Gulta, Stephen Chen 0001, Geoff Klein, Tayler D. Ross, Matthew Rezkalla, Daniel M. Palhares, Laura Burgess, Jay Detsky, Arjun Sahgal, Cari M. Whyne, Michael R. Hardisty. 1-8 [doi]
• Towards Accurate Identification of Anti-Hepatitis C Peptides Using Stack-AHCPLantian Yao, Chang Liu, Yen-Peng Chiu, Jiahui Guan, Peilin Xie, Zhihao Zhao, Xingchen Liu, Yilin Guo, Yulan Liu, Yunlu Peng, Ying-Chih Chiang, Tzong-Yi Lee. 1-9 [doi]
• An Endoscopic Lesion Segmentation ImprovementViet-Dung Nguyen, Khanh Linh Do-Thi, Manh Duy Tran, Tam Anh Bui, Minh Duc Phan, Phuc Ngoc Pham, Nguyen Khang Ho. 1-6 [doi]
• Investigating Forecasting Models for Pandemic Infections Using Heterogeneous Data Sources: A 2-year Study with COVID-19Zacharias Komodromos, Kleanthis Malialis, Panayiotis Kolios. 1-8 [doi]
• Enhancing Clinical Decision-Making: Integrating Multi-Agent Systems with Ethical AI GovernanceYing-Jung Chen, Ahmad Albarqawi, Chi-Sheng Chen. 1-7 [doi]
• GSDeep-DTA: A Hybrid Graph and Sequence-based Deep Learning Framework for Robust Drug-Target Affinity PredictionW. G. D. M. Samankula, Joanne Harvey, Binh P. Nguyen. 1-8 [doi]
• Continual Learning for Weakly-Supervised Histopathology Tissue SegmentationWei-Hua Li, Huei-Fang Yang, Chu-Song Chen. 1-8 [doi]
• SDPA++: A General Framework for Self-Supervised Denoising with Patch AggregationNhat Huy Nguyen Minh, Triet Hoang Minh Dao, Chau Vinh Hoang Truong, Cuong Tuan Nguyen. 1-5 [doi]
• Decoding Aging: Multi-Omics Insights into Oxidative Stress, Mitochondrial Dysfunction, and Cellular Senescence in FibroblastsRajarshi Mandal, Ning Xie, Gil Alterovitz. 1-9 [doi]
• Finding Healthcare Provider Experts via Sheaf LaplacianMehmet Emin Aktas, Iraj Moradi, Esra Akbas, Mehmet Boyno. 1-8 [doi]
• Visual Game-Based Upper Limb Ergometer Therapy Associated with EEG Responses in Stroke RehabilitationChiao-Hsin Chen, Li-Wei Ko, Hsuan Cheng, Yu-Lin Wang, Kai-Chiao Chi, Chih-Chung Wang, Chia-Hsin Chen. 1-6 [doi]
• GENESIS: Generating scRNA-Seq data from Multiome Gene ExpressionSimone G. Riva, Brynelle Myers, Francesca M. Buffa, Andrea Tangherloni. 1-8 [doi]
• Integrative Framework for Functional analysis of multiple Traditional Chinese Medicines based on transcriptome-driven systems biology and supervised learning strategyYun Tang, Chia-Ru Chung, Hsi-Yuan Huang, Yang-Chi-Dung Lin, Hua-Li Zuo, Jing Li, LiPing Li, Siyao Hu, Hsiao-Chin Hong, Fei Wang, Jinrui Bai, Hsien-Da Huang. 1-7 [doi]
• Leveraging Graph Information for Spatially Informed Patient Data Analysis with GISTGospel Ozioma Nnadi, Vincenzo Bonnici, Simone Avesani, Eva Viesi, Rosalba Giugno. 1-8 [doi]
• Closed-Loop Brain-Controlled Exoskeleton System with a Hybrid Model for Stroke RehabilitationYu-Wei Lin, Shi-Yong Luo, Po-Hsun Cheng, Chia-Hsin Chen, Zhi-Ting Chen, Yu-Zhen Liu, Li-Wei Ko. 1-6 [doi]
• Establishing a Cross-Population Machine Learning Model for Alzheimer's Disease Risk Prediction in the Taiwanese PopulationJustin Bo-Kai Hsu, Jia-Ruey Tsai, Shih-Han Hung, Cheng-Yang Lee, Chaur-Jong Hu, Tzu-Hao Chang. 1-8 [doi]
• Deep Learning-Based Object Detection System for Vocal Cords in Laryngoscopy ImagesYing-Chang Wu, Sheng-Fu Liang, Cheng-Ming Hsu, Ming-Chi Cheng. 1-6 [doi]
• Evaluating the Feasibility of Vision-Language Models in Skin Cancer Detection: A Comparative Study with CNNs and Vision TransformersYu-Hxiang Chen, Ting-Ting Chang, Yao-Zhi Xue, Wei-Hsiang Sung, Chia-Yu Lin. 1-7 [doi]
• OSANet: Detection of Obstructive Sleep Apnea Episodes Using a DarkNet-Based Deep Learning Approach and Time-Frequency Spectrogram Features Derived from Single-Lead ECGFebryan Setiawan, Che-Wei Lin. 1-8 [doi]
• Short-term impacts of weather conditions on biomarkers among urban adults in GreeceKaterina Tsiaktani, Panagiotis Anagnostou, Sotiris K. Tasoulis, Spiros V. Georgakopoulos, John A. Gittings, Dionysios E. Raitsos, Athanasia Sergounioti, Vassilis P. Plagianakos. 1-8 [doi]
• Alzheimer's Disease Risk Prediction in the Elderly: A Machine Learning Approach Combining Clinical Characteristics and Polygenic Risk ScoresJustin Bo-Kai Hsu, Cheng-Yang Lee, Jia-Ruey Tsai, Vijesh Kumar Yadav, Chuan Huang, Tzu-Hao Chang. 1-7 [doi]
• Explainable Machine Learning for Failed Labor Induction Prediction Using Nationwide Insurance DataDaniel Chriswinanto Adityo Nugroho, Septian D. Periska, Justinus A. Putranto, Jimmy I. Gunawan, Muhammad S. Muhtar, Jason C. Hsu, Yuan-Chii G. Lee, Emily Chia-Yu Su. 1-7 [doi]
• REnformer, a single-cell ATAC-seq predicting model to investigate open chromatin sitesSimone G. Riva, Edward Sanders, Tom Wilson, Nicolò Stranieri, E. Ravza Gür, Matthew Baxter, Jim R. Hughes. 1-8 [doi]
• BacCal GUI: Streamlining Virus Titration CalculationsMeng-Chi Chung, Tzong-Yuan Wu, Li-Ching Wu. 1-5 [doi]
• EL-DRP: An Evolutionary Learning-Based Multi-Omics Framework for Drug Response Prediction with Interpretable Biomarker SelectionYann-Jen Ho, Paik You Sheng, Yu-Ruo Chen, Yun Tang, Shinn-Ying Ho, Tzong-Yi Lee. 1-7 [doi]
• CombDNF: Disease-Specific drug combination predictions with network-based features on clinically validated dataPauline Hiort, Bernhard Y. Renard, Katharina Baum. 1-9 [doi]
• Intelligent Biomechanical Simulation of Bone Healing and RemodelingWai Yie Leong. 1-5 [doi]
• Leveraging Diffusion-Based Models for Data Augmentation in Maternal-Fetal Ultrasound ClassificationWong Shi Hao, Tsung-Lu Michael Lee. 1-8 [doi]
• Inductive models for structured output prediction of lncRNA-disease associationsFelipe Kenji Nakano, Livia Bertoni, Ricardo Cerri, Celine Vens. 1-8 [doi]
• Synthetic data in AI-powered medical devices - the EU regulatory implicationsTomasz Braun, Dominika Ewa Harasimiuk. 1-7 [doi]
• Let's Talk 'Bout Mutation: Evolutionary Programming for DNA SequencesJames Sargant, Michael Dubé, Sheridan K. Houghten, Steffen Graether. 1-8 [doi]
• Enhancing Machine Learning Models for Medical Coding: Diagnostic Codes Mapping and Synthetic Clinical NotesAikaterini Bilioni, Panagiotis Anagnostou, Sotiris K. Tasoulis, Spiros V. Georgakopoulos, Vassilis P. Plagianakos. 1-8 [doi]
• AI-Enhanced MALDI-TOF MS Analysis for Important Peaks on Predicting Ciprofloxacin Resistance across Different Gram-Negative BacteriaHsin-Yao Wang, Chia-Ru Chung, Wen-Rui Zhang, Li-Ching Wu, Justin Bo-Kai Hsu, Jang-Jih Lu, Jorng-Tzong Horng. 1-8 [doi]
• Keypoint-Guided Ophidian Transformation for String-Shaped Data AugmentationTszyi Kwok, Brendan Park, Katharine Yagi, Anne Yagi, Chunsheng Yang, Min Liao, Yifeng Li. 1-10 [doi]
• Knowledge-Enriched Cell-Type Annotation in Single-Cell Transcriptomics via LLM EmbeddingsAndrea Fabbricatore, Francesca M. Buffa, Andrea Tangherloni. 1-8 [doi]
• TPP Riboswitch Design Using Secondary-Structure-Informed Geometric GNNPradeepthi Rangineni, Nitin Manne, Nick Paradis, Ali Tekeoglu, Chen-Fu Chiang, Amirhossein Manzourolajdad. 1-7 [doi]
• Balanced Benchmarking of Zero-Shot and RAG Approaches for Biomedical Term NormalizationThanh Son Do, Daniel B. Hier, Tayo Obafemi-Ajayi. 1-6 [doi]
• Integrative Multi-Omics Prognostic Modeling of Glioma Recurrence Using Variational Autoencoder and Similarity Network FusionPhuong Lam Tran, Yun Tang, Justin Bo-Kai Hsu, Tzong-Yi Lee. 1-8 [doi]
• Rank Correlation and Cluster Testing in Multi-Objective Data Analysis of Medical DataRachel Ellen Brown, Qihao Shan, Klaus-Peter Stein, I. Erol Sandalciolgu, Sanaz Mostaghim. 1-8 [doi]
• SHAP-Driven Deep Learning Identifies Pre-Symptomatic Influenza A Biomarkers: An Explainable AI Framework for Clinical GenomicsTsung-Hsien Lin, Anna Zan, Zhi-Jian Cheng, Zhong-Ru Xie, Kuan Y. Chang. 1-8 [doi]
• Development of a Sliding Window-Based Oversampling Framework for Convolutional Neural Network Sleep Stage Classification Using Polysomnographic Spectrogram FusionAi Chung, Febryan Setiawan, Cheng-Yu Lin, Che-Wei Lin. 1-8 [doi]