Abstract is missing.
- Local rules for protein folding on a triangular lattice and generalized hydrophobicity in the HP modelRicha Agarwala, Serafim Batzoglou, Vlado Dancík, Scott E. Decatur, Martin Farach, Sridhar Hannenhalli, S. Muthukrishnan, Steven Skiena. 1-2 [doi]
- ReAligner: a program for refining DNA sequence multi-alignmentsEric L. Anson, Eugene W. Myers. 9-16 [doi]
- On constructing radiation hybrid maps (extended abstract)Amir Ben-Dor, Benny Chor. 17-26 [doi]
- Sequence alignment with tandem duplicationGary Benson. 27-36 [doi]
- The power of surface-based DNA computation (extended abstract)Weiping Cai, Anne Condon, Robert M. Corn, Elton Glaser, Zhengdong Fei, Tony Frutos, Zhen Guo, Max G. Lagally, Qinghua Liu, Lloyd M. Smith, Andrew Thiel. 67-74 [doi]
- Sorting by reversals is difficultAlberto Caprara. 75-83 [doi]
- A branch-and-cut approach to physical mapping with end-probesThomas Christof, Michael Jünger, John D. Kececioglu, Petra Mutzel, Gerhard Reinelt. 84-92 [doi]
- Monte Carlo sequence alignmentGary A. Churchill. 93-97 [doi]
- Numerical taxonomy on data (abstract): experimental resultsJaime Cohen, Martin Farach. 98 [doi]
- On the complexity and approximation of syntenic distanceBhaskar DasGupta, Tao Jiang, Sampath Kannan, Ming Li, Z. Sweedyk. 99-108 [doi]
- Protein structure prediction and potential energy landscape analysis using continuous global minimizationKen A. Dill, Andrew T. Phillips, J. Ben Rosen. 109-117 [doi]
- An algorithmic approach to multiple complete digest mappingDaniel P. Fasulo, Tao Jiang, Richard M. Karp, Reuben Settergren, Edward C. Thayer. 118-127 [doi]
- On the computational complexity of sequence design problemsWilliam E. Hart. 128-136 [doi]
- Lattice and off-lattice side chain models of protein folding (extended abstract): linear time structure prediction better than 86 of optimalWilliam E. Hart, Sorin Istrail. 137-146 [doi]
- Algorithms for computing and integrating physical maps using unique probesMudita Jain, Eugene W. Myers. 151-161 [doi]
- Mapping clones with a given ordering or interleaving (abstract)Tao Jiang, Richard M. Karp. 162 [doi]
- Faster and simpler algorithm for sorting signed permutations by reversalsHaim Kaplan, Ron Shamir, Robert Endre Tarjan. 163 [doi]
- Assessing inhomogeneities in bacterial long genomic sequencesSamuel Karlin. 164-171 [doi]
- Chimeric alignment by dynamic programming: algorithm and biological usesGeorge A. Komatsoulis, Michael S. Waterman. 174-180 [doi]
- New contact measures for the protein docking problemHans-Peter Lenhof. 182-191 [doi]
- An algorithm for haplotype analysisShili Lin, Terence P. Speed. 192-200 [doi]
- DNA probe arrays - accessing the genome (abstract)Robert J. Lipshutz. 201 [doi]
- Supervised learning of hidden Markov models for sequence discriminationHiroshi Mamitsuka. 202-208 [doi]
- Towards constructing physical maps by optical mapping (extended abstract): an effective, simple, combinatorial approachS. Muthukrishnan, Laxmi Parida. 209-219 [doi]
- Progressive multiple alignment with constraintsGene Myers, Sanford Selznick, Zheng Zhang 0004, Webb Miller. 220-225 [doi]
- Simulating Boolean circuits on a DNA computerMitsunori Ogihara, Animesh Ray. 226-231 [doi]
- Improved splice site detection in GenieMartin G. Reese, Frank H. Eeckman, David Kulp, David Haussler. 232-240 [doi]
- A branch-and-cut algorithm for multiple sequence alignmentKnut Reinert, Hans-Peter Lenhof, Petra Mutzel, Kurt Mehlhorn, John D. Kececioglu. 241-250 [doi]
- Hunting for new restriction enzymes in GenBank (abstract)Richard J. Roberts. 251 [doi]
- Conserved segment identificationDavid Sankoff, Vincent Ferretti, Joseph H. Nadeau. 252-256 [doi]
- The deferred path heuristic for the generalized tree alignment problemBenno Schwikowski, Martin Vingron. 257-266 [doi]
- Building human genome maps with radiation hybridsDonna K. Slonim, Leonid Kruglyak, Lincoln Stein, Eric S. Lander. 277-286 [doi]
- The threading approach to the inverse protein folding problemTemple F. Smith, Loredana Lo Conte, Jadwiga R. Bienkowska, Robert G. Rogers, Chrysanthe Gaitatzes, Richard H. Lathrop. 287-292 [doi]
- Pooling strategies for establishing physical genome maps using FISHFengzhu Sun, Gary Benson, Norman Arnheim, Michael S. Waterman. 294-299 [doi]
- Las Vegas algorithms for gene recognition: suboptimal and error-tolerant spliced alignmentSing-Hoi Sze, Pavel A. Pevzner. 300-309 [doi]
- A more efficient approximation scheme for tree alignmentLusheng Wang, Tao Jiang, Dan Gusfield. 310-319 [doi]
- Beyond islands (extended abstract): runs in clone-probe matricesDavid Bruce Wilson, David S. Greenberg, Cynthia A. Phillips. 320-329 [doi]
- Reference-based gene model prediction on DNA contigs (extended abstract)Ying Xu, Edward C. Uberbacher. 330-336 [doi]