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Viewing Publication 1 - 100 from 283

2010

A Fast Algorithm for Detecting Genes Controlled by RNAi by Degradation TechniqueMohammad Abdel-Rahman, Aliaa Youssif, Fayed Ghaleb, Abdel-Badeeh Salem. biocomp 2010: 42-48

Phylogenetic Analysis of H1N1 2009 Influenza VirusAmeer Shaik Abdul, Aparna Sriram, Sri Harsha Muppaneni, Teja Polapragada, Zhong-Hui Duan. biocomp 2010: 334-338

Automatic Computation for Pressure Controlled Intermittent Coronary Sinus OcclusionLoay Alzubaidi, Werner Mohl, Frank Rattay. biocomp 2010: 502-506

A Danger Theory ModelSuhair Amer, John Hamilton. biocomp 2010: 599-604

Global Optimization of Molecular Potential Energy Function Using a Real Coded Genetic AlgorithmShashi Barak, Kusum Deep, Krishna Pratap Singh, Vinod Kumar Katiyar. biocomp 2010: 442-447

Automated Medical Image Fusion: A Comparative Study Between GA and PSO Based ApproachesMahua Bhattacharya, Arpita Das. biocomp 2010: 398-403

Using the Genetic Code Wisdom for Recognizing Protein Coding SequencesPawel Blazej, Pawel Mackiewicz, Stanislaw Cebrat. biocomp 2010: 302-305

Towards A Real-Time Mobile Health Care Monitoring Embedded SystemAlessandro Brawerman, Mauricio Perretto, Edson Sieczka, Fabio Hoffmann. biocomp 2010: 537-543

A New Attempt to Stimulus Related Data Analysis by Structured Neural NetworksBernd Brückner, Tobias Walter. biocomp 2010: 476-480

The Length Distributions of Non-coding and Coding Sequences in Relation to Gene Expression: A Study on Arabidopsis thalianaRachel Caldwell, Jinda Kongcharoen, Yan-Xia Lin, Ren Zhang. biocomp 2010: 127-133

Cell Assay Image Classification with Few Labeled ExamplesNicolas Cebron. biocomp 2010: 792-795

Protein Sequence Motif Information Generated by Fuzzy - Hybrid Hierarchical K-means Clustering AlgorithmBernard Chen, Christopher Rhodes, Christopher Kline, Luke Irvin. biocomp 2010: 198-201

Clustering using Positional Association Rules Algorithm on Protein Sequence MotifsBernard Chen, Michael Miller, Timothy Montgomery, Terrance Griffin. biocomp 2010: 75-80

Interval-Censoring in Biomedical and Biopharmaceutical Clinical TrialsDing-Geng Chen, Karl E. Peace, Lili Yu, Yuhlong Lio, Yibin Wang. biocomp 2010: 779-784

On Complexity of Transforming StringsBhadrachalam Chitturi. biocomp 2010: 584-590

Prefix Reversals on StringsBhadrachalam Chitturi, Ivan Hal Sudborough. biocomp 2010: 591-598

Molecular Probes for the Detection of Cyanophage AS-1 and its Cyanobacterial HostsTin-Chun Chu, Jonathan Jimenez, Lauren Strawn, Michelle Reed, Lauren Pohren, Lee H. Lee. biocomp 2010: 356-362

Proper Alignment of MS/MS Spectra from Unsequenced SpeciesFreddy Cliquet, Guillaume Fertin, Irena Rusu, Dominique Tessier. biocomp 2010: 766-772

Application of W-curves and TSP to Clustering HIV-1 Sequences by EpitopeDouglas Cork, Steven Lembark, Sodsai Tovanabutra, Eric Sanders-Buell, Bruce Brown, Merlyn Robb, Lindsay Wieczorek, Victoria Polonis, Nelson Michael, Jerome Kim. biocomp 2010: 847-853

From Celestial to Terrestrial: A New Light on David Kinnebrook s Systematic Error of Judgment at Greenwich in 1796Iraj Derakhshan. biocomp 2010: 666-670

A New Bioinformatics Tool for Prediction with ConfidenceDmitry Devetyarov, Martin Woodward, Nicholas Coldham, Muna Anjum, Alexander Gammerman. biocomp 2010: 24-28

Spatially Indexing Sequences using HashesMike Eagar, Mark J. Clement, Quinn Snell. biocomp 2010: 811-814

Gene Regulatory Network Reconstruction Based on Gene Expression and Transcription Factor ActivitiesYao Fu, Laura Jarboe, Julie Dickerson. biocomp 2010: 113-119

Differentiation of Glioblastomas and Metastases using 1H-MRS spectral dataFernando Gonzalez, Lluís Belanche. biocomp 2010: 414-420

Normalized Microarrays for Analysis and Prediction (NMAP): An SOA Solution for Biomedical ResearchManu Sheel Gupta, Pragya Goel. biocomp 2010: 140-145

A Pathway Based Model of Retinoid Dependent Growth Arrest and DifferentiationShobha Gupta, T. K. Basak, S. K. Chaudhary. biocomp 2010: 435-441

Three Dimensional Structure Modeling and Analysis of Ribulose 1, 5-Bisphosphate Carboxylase of Hypericum PerforatumAshish Gupta, Anshika Malaviya, Sharada M. Potukuchi, Jitendra Narayan. biocomp 2010: 807-810

Automatic Cell Identification Using a Multiple Marked Point ProcessHiroshi Hatsuda. biocomp 2010: 605-609

Matrix Genetics and THE Bipolar Algbera of the Genetic CodeMatthew He, Sergei Petoukhov. biocomp 2010: 678-686

Discovery of Enriched Biological Motifs Using Knowledge Priors with Application to Biohydrogen ProductionWilliam Hendrix, Andrea Rocha, Mark T. Elmore, Joe Trien, Nagiza F. Samatova. biocomp 2010: 17-23

Detection and Characterization of Vesicles in EM ImagesGilles Hermann, Hubert Kihl, Jean-Philippe Urban. biocomp 2010: 381-386

Change Point Detection Via Sub-Gaussian FittingAdam Hoover, Anirud Singh, Stephanie Fishel-Brown, Eric Muth. biocomp 2010: 3-9

A Scale-Free-Network Analog of the Canonical Potential-Energy DistributionJack Horner. biocomp 2010: 640-643

Sensitivity of a Phylogeny of the Triassic Avian-LIne Radiation to Character-Transition OrderingJack Horner. biocomp 2010: 248-254

A Bayesian Phylogenetic Analysis of an Early Avian-Line RadiationJack Horner. biocomp 2010: 191-197

BFAT: Bovine Spongiform Encephalopathy (BSE) Forensic Analysis ToolJack Horner. biocomp 2010: 610-616

A Bayesian Phylogenetic Analysis of Influenza A/H1N1 Neuraminidase-Encoding SegmentsJack Horner. biocomp 2010: 350-355

An Estimate of the Mutation Rates of the Active Sites of Influenza A/H5N1 NeuraminidasesJack Horner. biocomp 2010: 344-349

Co-Evolution of the Influenza Virus and Its HostsStephen Huff, Mark Rojas, Paul Havlak, Yuriy Fofanov. biocomp 2010: 339-342

Pathway-based Microarray Data Analysis for Cancer ResearchFei-Hung Hung, Hung-Wen Chiu. biocomp 2010: 706-711

A Model Reduction Technique for Stochastic Biochemical KineticsSilvana Ilie, Ekaterina Kudashkina. biocomp 2010: 448-453

Global Stability for the n-Species Lotka-Volterra Tree SystemsXinhua Ji. biocomp 2010: 644-650

Translating Gene Signatures Across Tissues: A Statistical ViewAdetayo Kasim, Ziv Shkedy, Dan Lin, Suzy Van Sanden, José Cortiñas Abrahantes, Hinrich W. H. Göhlmann, Luc Bijnens, Dani Yekutieli, Michael Camilleri, Jeroen Aerssens, Willem Talloen. biocomp 2010: 298-301

Comparative Analysis of the Computational Methods used in Protein Structure PredictionUmair Khan, Humaira Qureshi. biocomp 2010: 98-103

SA-Motifbase: A Database of Protein Structural Alphabet MotifsShih-Yen Ku, Yuh-Jyh Hu. biocomp 2010: 796-800

A Novel Majority Vote Count Algorithm for Integrative Analysis of Association NetworksKarl G. Kugler, Laurin A. J. Mueller, Ralf Gallasch, Armin Graber, Matthias Dehmer. biocomp 2010: 62-67

Network Inference by Considering Multiple Objectives: Insights from In Vivo Transcriptomic Data Generated by a Synthetic NetworkSandro Lambeck, Andreas Dräger, Reinhard Guthke. biocomp 2010: 734-742

Comparing Robust Methods for Defining Directed Networks and Their Hub NodesPeter Langfelder, Tova Fuller, Steve Horvath. biocomp 2010: 687-692

Seizure Detection Using Sequential and Coincident Power Spectra with Deterministic Finite AutomataRory A. Lewis, Andrew M. White. biocomp 2010: 481-488

Use of a Sequential Forward Floating Search Method in Selecting fMRI and EEG Features for Classification of Visual TasksBian Li, Mary C. Baker, Kwaku Akrofi, Allison McMahon. biocomp 2010: 409-413

Bayesian Approach for Identifying Short Adjacent Repeats in Multiple SequencesQiwei Li, Tong Liang, Shuo-Yen Robert Li, Xiaodan Fan. biocomp 2010: 255-261

Time Frequency Analysis of Mitochondrial GenomeEric Linton, Paul Albee, Patrick Kinnicutt, En-Bing Lin. biocomp 2010: 293-297

Strategic Planning Of Identification Technologies In Healthcare Processes: A Model and A Real CasePaolo Locatelli, Nicola Restifo, Roberta Facchini, Elena Sini, Michele Torresani. biocomp 2010: 421-427

Non Destructive Sensing of Food Materials using Fuzzy c-means ClusteringGugulethu Mabuza, Tarik Al-Ani, Karim Djouani, Johnson I. Agbinya. biocomp 2010: 773-778

Application of Machine Learning Algorithms for Binning Metagenomic DataVasim Mahamuda, Manchon U, Rasheed Khaled. biocomp 2010: 68-74

Promoter Prediction in Halothiobacillus Neapolitanus c2 Based on Stress-induced Duplex DestabilizationAleksandra Markovets, Abigail Newsome, Charles Bland. biocomp 2010: 363-366

Parallel Hybrid Genetic Algorithm based Dynamic Load-Balancing for Mining of Molecular FragmentsSalahuddin Mohammad Masum, Mohammed Yeasin. biocomp 2010: 827-833

Robust Stability Analysis of Multi-Time Scale Genetic Regulatory Networks under Parametric UncertaintiesAnke Meyer-Bäse, Claudia Plant, Susanne Cappendijk, Fabian J. Theis. biocomp 2010: 854-863

Robust Stability Analysis and Design Under Consideration of Multiple Feedback Loops in the Tryptophan Regulatory Network of E. coliAnke Meyer-Bäse, Fabian J. Theis. biocomp 2010: 755-759

Information-Theoretic Inference of Gene Networks Using Backward EliminationPatrick Meyer, Daniel Marbach, Sushmita Roy, Manolis Kellis. biocomp 2010: 700-705

Mining Minimum Generalized Set Based on Multiple Alignments from Mismatch ClusterKazuya Miyahara, Hajime Kitakami, Yoshifumi Takahashi, Keiichi Tamura, Susumu Kuroki. biocomp 2010: 35-41

A Network-based Approach to Classify Disease Stages of Prostate Cancer Using Quantitative Network MeasuresLaurin A. J. Mueller, Karl G. Kugler, Andreas Dander, Christian Baumgartner, Armin Graber, Matthias Dehmer. biocomp 2010: 55-61

Can Graph Motifs Capture the Functions of a Complex Network?Venu K. Murthy, Edayathu V. Krishnamurthy. biocomp 2010: 134-139

The Impact of Equally-Optimal Pairwise AlignmentsLukas Olson, Mark J. Clement, Quinn Snell. biocomp 2010: 870-872

Detection of Alternative Splicing based on Reduced Amino Acid AlphabetMinseo Park. biocomp 2010: 173-177

Reconstruction of Biological Networks Structure by Using Bayesian Network Models with a Two-step Learning ProcedureBaikang Pei, Dong-Guk Shin. biocomp 2010: 743-749

Data Mining Approaches for Genome-Wide Association of Mood DisordersMehdi Pirooznia, Fayaz Seifuddin, Jennifer Judy, Pamela B. Mahon, James B. Potash, Peter P. Zandi. biocomp 2010: 10-16

Identifying CRC Specific Pathways and Drug Targets from Literature Augmented Proteomics DataMeeta Pradhan, Mathew Palakal. biocomp 2010: 323-331

Gene Expression Analysis of Genes Involved in Bypassing Cellular Senescence in Prostate CancerNeha Puri, Niravath Geethu Issac, Shipra Vinodkumar Gupta, Kushagra Srivastava. biocomp 2010: 152-158

Improving Survival Rates Using Data MiningManasi Raddi, Manasi Pandire, Radha Shankarmani, Kailas Devadkar. biocomp 2010: 104-112

Protein Model Assessment via Improved Fuzzy Decision TreeAnjum Reyaz-Ahmed, Na el Abu-halaweh, Robert W. Harrison, Yan-Qing Zhang. biocomp 2010: 238-241

Extended Secure Architecture of HIS: HL7Dinesh Kumar Saini, Osama A. Rahmeh, Hemraj Saini. biocomp 2010: 617-623

Web 2.0 and Healthcare Collaborative Framework for Health Awareness and EducationDinesh Kumar Saini, Sanad Al-Maskari, Wail M. Omar. biocomp 2010: 561-564

Design and Simulation of Optimal Control Systems Applied to COPD PatientsJaime Rojas Sanchez, Jonathan Chaparro Sanchez, Jose Soriano. biocomp 2010: 464-469

To Live and Die in CAKeith E. Schubert, Ernesto Gomez, Jane Curnutt, Penelope Boston. biocomp 2010: 662-665

Identifying Highly Conserved Blocks in Families of Biosequences Through Selective ExtensionsJaime Seguel, Yaisiel Torres. biocomp 2010: 311-314

Using Kernel-PCA Features for EEG Spike SortingMuneem Shahriar, Mary C. Baker. biocomp 2010: 514-518

Asymptotic Analysis of SIMD Optimized DFT based EXON Prediction Algorithm for DNA SequencesSyed Shams-ul-Haq. biocomp 2010: 315-322

Bhageerath: A Web Enabled High Performance Computing (HPC) Software Suite for Predicting The Tertiary Structures of Small Globular Proteins Using all Atom Energy Based Ab initio MethodsShashank Shekhar, Priyanka Dhingra, Bharat Lakhani, Avinash Mishra, B. Jayaram. biocomp 2010: 651-657

Suggested Hybrid Approach for Robust Classification of EEG Data for Brain Computer InterfaceIjaz Ali Shoukat, Mohsin Iftikhar. biocomp 2010: 87-97

Doppler Ultrasound Signal Spectral Response in the Measurement of Blood Flow Turbulence Caused by StenosisJulio Solano-González, Monica Vazquez, Ernesto Rubio, Israel Sanchez, Martin Fuentes, Fabian Garcia Nocetti. biocomp 2010: 404-408

Identification of Specific Gene Expression Signatures in OncologyGregor Stiglic, Igor Pernek, Peter Kokol. biocomp 2010: 760-765

Multistage SVM as a Clinical Decision Making Tool for Predicting Post Operative Patient StatusMelissa Stockman, Mariette Awad. biocomp 2010: 549-552

Electrical Activity of Human Brain - An Early Marker for Alzheimer s DiseaseV. K. Sudha, N. Ashok Kumar, R. Sudhakar. biocomp 2010: 553-556

Computational Determination of Aqueous Concentrations of Inhalational AnestheticsChristopher Theisen, Norbert W. Seidler. biocomp 2010: 532-536

Infrared Tracking for Locomotion and Devices Control in Quadriplegic PeopleMauricio Plaza Torres. biocomp 2010: 873-876

MicroLabs for Human SpermGiuseppe Tritto, Xianghong Ma, Mark price. biocomp 2010: 822-826

A Holistic, Interactive and Persuasive Model to Facilitate Self-care of Patients with Diabetes in Latin America and the CaribbeanMiguel Vargas-Lombardo, Armando Jipsion, Rafael Vejarano, Ismael Camargo, Humberto Alvarez, Elena Villalba Mora, Ernestina Menasalva Ruiz. biocomp 2010: 544-548

qtpaintgui() - An integration of Command Line and Graphical User InterfaceMarie Vendettuoli, Dianne Cook, Heike Hofmann. biocomp 2010: 624-629

Computational Identification of Human Tissue-Specific Genes Using Public Microarray Expression DataLiangjiang Wang. biocomp 2010: 120-126

Computer Simulation for the Development of Immune CellsZizhong Wang, HuiQing Yang. biocomp 2010: 470-475

Collecting Statistical Information in DNA Sequences for the Detection of Special MotifsLars Wienbrandt, Manfred Schimmler. biocomp 2010: 274-278

Free Energy Decomposition of the Helix to Coil TransitionGregory Wood, Drew Clinkenbeard. biocomp 2010: 242-247

A Novel Protein Secondary Structure Prediction System Based on Compound Pyramid ModelBingru Yang. biocomp 2010: 229-237

Computer-assisted Analysis of Fetal HydrocephalusAliaa Youssif. biocomp 2010: 507-513

Predicting Membrane Proteins Type Using Inter-domain Linker KnowledgeNazar Zaki, Wassim El-Hajj. biocomp 2010: 209-214

Alignment of Sequences Using a Genetic Algorithm and Dynamic ProgrammingVianney Morales Zamora, Jose Crispin Hernandez Hernandez, Jose Federico Ramírez Cruz. biocomp 2010: 286-292

Fitting Probit Regression using Functional Gradient Ascent for Cancer ClassificationSongfeng Zheng, Weixiang Liu. biocomp 2010: 81-86

Median Boost for Cancer Classification with Gene Expression DataSongfeng Zheng, Weixiang Liu. biocomp 2010: 146-151

A Tumor Diagnoses Assistant System in Traditional Chinese Medicine(TCM) Combining With Modern MedicineGuohong Zhou, Shuqian Luo. biocomp 2010: 557-560

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2010

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