RedOak: a reference-free and alignment-free structure for indexing a collection of similar genomes

Clément Agret, Annie Chateau, Gaëtan Droc, Gautier Sarah, Manuel Ruiz, Alban Mancheron. RedOak: a reference-free and alignment-free structure for indexing a collection of similar genomes. J. Open Source Software, 7(80):4363, December 2022. [doi]

@article{AgretCDSRM22,
  title = {RedOak: a reference-free and alignment-free structure for indexing a collection of similar genomes},
  author = {Clément Agret and Annie Chateau and Gaëtan Droc and Gautier Sarah and Manuel Ruiz and Alban Mancheron},
  year = {2022},
  month = {December},
  doi = {10.21105/joss.04363},
  url = {https://doi.org/10.21105/joss.04363},
  researchr = {https://researchr.org/publication/AgretCDSRM22},
  cites = {0},
  citedby = {0},
  journal = {J. Open Source Software},
  volume = {7},
  number = {80},
  pages = {4363},
}