A tile-based parallel Viterbi algorithm for biological sequence alignment on GPU with CUDA

Zhihui Du, Zhaoming Yin, David A. Bader. A tile-based parallel Viterbi algorithm for biological sequence alignment on GPU with CUDA. In 24th IEEE International Symposium on Parallel and Distributed Processing, IPDPS 2010, Atlanta, Georgia, USA, 19-23 April 2010 - Workshop Proceedings. pages 1-8, IEEE, 2010. [doi]

Authors

Zhihui Du

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Zhaoming Yin

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David A. Bader

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