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BioCodex: HPC-Native Agentic Genomics Workflows via MCP RunSpecs and Asynchronous Slurm Execution

Carl Ehrett, Alex Feltus, Douglas Dawson, Zachary Gerstner, Tzu-Yu Chu. BioCodex: HPC-Native Agentic Genomics Workflows via MCP RunSpecs and Asynchronous Slurm Execution. In Proceedings of the Practice and Experience in Advanced Research Computing 2026: Resilient Roots + Empowered Communities, Minneapolis, MN, USA, July 26-30, 2026. ACM, 2026. [doi]

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Carl Ehrett

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Alex Feltus

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Douglas Dawson

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Zachary Gerstner

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Tzu-Yu Chu

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