Recommendations for performance optimizations when using GATK3.8 and GATK4

Jacob R Heldenbrand, Saurabh Baheti, Matthew A. Bockol, Travis M. Drucker, Steven N. Hart, Matthew E. Hudson, Ravishankar K. Iyer, Michael Kalmbach, Katherine I Kendig, Eric W. Klee, Nathan R Mattson, Eric D. Wieben, Mathieu Wiepert, Derek E. Wildman, Liudmila S. Mainzer. Recommendations for performance optimizations when using GATK3.8 and GATK4. BMC Bioinformatics, 20(1), 2019. [doi]

@article{HeldenbrandBBDH19,
  title = {Recommendations for performance optimizations when using GATK3.8 and GATK4},
  author = {Jacob R Heldenbrand and Saurabh Baheti and Matthew A. Bockol and Travis M. Drucker and Steven N. Hart and Matthew E. Hudson and Ravishankar K. Iyer and Michael Kalmbach and Katherine I Kendig and Eric W. Klee and Nathan R Mattson and Eric D. Wieben and Mathieu Wiepert and Derek E. Wildman and Liudmila S. Mainzer},
  year = {2019},
  doi = {10.1186/s12859-019-3169-7},
  url = {https://doi.org/10.1186/s12859-019-3169-7},
  researchr = {https://researchr.org/publication/HeldenbrandBBDH19},
  cites = {0},
  citedby = {0},
  journal = {BMC Bioinformatics},
  volume = {20},
  number = {1},
}