ProtoMol, an object-oriented framework for prototyping novel algorithms for molecular dynamics - researchr publication related

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Thierry Matthey, Trevor M. Cickovski, Scott S. Hampton, Alice Ko, Qun Ma, Matthew Nyerges, Troy Raeder, Thomas Slabach, Jesús A. Izaguirre. ProtoMol, an object-oriented framework for prototyping novel algorithms for molecular dynamics. ACM Transactions on Mathematical Software, 30(3):237-265, 2004. [doi]

The following publications are possibly variants of this publication:

PROTOMOL: A Molecular Dynamics Research Framework for Algorithmic DevelopmentThierry Matthey, Alice Ko, Jesús A. Izaguirre. iccS 2003: 50-59 [doi]

ProtoMol: A Molecular Dynamics Framework with Incremental ParallelizationThierry Matthey, Jesús A. Izaguirre. ppsc 2001:

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