Optimized pipeline of MuTect and GATK tools to improve the detection of somatic single nucleotide polymorphisms in whole-exome sequencing data

Ìtalo Faria do Valle, Enrico Giampieri, Giorgia Simonetti, Antonella Padella, Marco Manfrini, Anna Ferrari, Cristina Papayannidis, Isabella Zironi, Marianna Garonzi, Simona Bernardi, Massimo Delledonne, Giovanni Martinelli, Daniel Remondini, Gastone C. Castellani. Optimized pipeline of MuTect and GATK tools to improve the detection of somatic single nucleotide polymorphisms in whole-exome sequencing data. BMC Bioinformatics, 17(S-12):27-35, 2016. [doi]

Authors

Ìtalo Faria do Valle

This author has not been identified. Look up 'Ìtalo Faria do Valle' in Google

Enrico Giampieri

This author has not been identified. Look up 'Enrico Giampieri' in Google

Giorgia Simonetti

This author has not been identified. Look up 'Giorgia Simonetti' in Google

Antonella Padella

This author has not been identified. Look up 'Antonella Padella' in Google

Marco Manfrini

This author has not been identified. Look up 'Marco Manfrini' in Google

Anna Ferrari

This author has not been identified. Look up 'Anna Ferrari' in Google

Cristina Papayannidis

This author has not been identified. Look up 'Cristina Papayannidis' in Google

Isabella Zironi

This author has not been identified. Look up 'Isabella Zironi' in Google

Marianna Garonzi

This author has not been identified. Look up 'Marianna Garonzi' in Google

Simona Bernardi

This author has not been identified. Look up 'Simona Bernardi' in Google

Massimo Delledonne

This author has not been identified. Look up 'Massimo Delledonne' in Google

Giovanni Martinelli

This author has not been identified. Look up 'Giovanni Martinelli' in Google

Daniel Remondini

This author has not been identified. Look up 'Daniel Remondini' in Google

Gastone C. Castellani

This author has not been identified. Look up 'Gastone C. Castellani' in Google