Evangelos A. Coutsias - researchr alias

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Viewing Publication 1 - 19 from 19

2023

Numerically stable algorithm for Inverse Kinematics of 6R problem and its applications to macrocyclesXin Cao, Mikhail Ignatov, George Jones, Sara N. Pollock, Evangelos A. Coutsias, Dima Kozakov. bcb 2023: [doi]

2021

Kinematic Reconstruction of Cyclic Peptides and Protein Backbones from Partial DataMosavverul Hassan, Evangelos A. Coutsias. jcisd, 61(10):4975-5000, 2021. [doi]

Protein secondary structure motifs: A kinematic constructionMosavverul Hassan, Evangelos A. Coutsias. jcc, 42(5):271-292, 2021. [doi]

2020

Sampling and refinement protocols for template-based macrocycle docking: 2018 D3R Grand Challenge 4Sergei Kotelnikov, Andrey Alekseenko, Cong Liu, Mikhail Ignatov, Dzmitry Padhorny, Emiliano Brini, Mark Lukin, Evangelos A. Coutsias, Ken A. Dill, Dima Kozakov. jcamd, 34(2):179-189, 2020. [doi]

2019

RMSD and SymmetryEvangelos A. Coutsias, Michael J. Wester. jcc, 40(15):1496-1508, 2019. [doi]

2018

Laguerre-Intersection Method for Implicit SolvationMichelle Hatch Hummel, Bihua Yu, Carlos Simmerling, Evangelos A. Coutsias. ijcga, 28(1):1-38, 2018. [doi]

2016

2015

Bricard flexible octahedra and the canonical cyclohexaneEvangelos A. Coutsias. cca, 49(2):56, 2015. [doi]

2011

The FALC-Loop web server for protein loop modelingJunsu Ko, Dongseon Lee, Hahnbeom Park, Evangelos A. Coutsias, Julian Lee, Chaok Seok. nar, 39(Web-Server-Issue):210-214, 2011. [doi]

2008

Scaffold Topologies. 1. Exhaustive Enumeration up to Eight RingsSara N. Pollock, Evangelos A. Coutsias, Michael J. Wester, Tudor I. Oprea. jcisd, 48(7):1304-1310, 2008. [doi]

Scaffold Topologies. 2. Analysis of Chemical DatabasesMichael J. Wester, Sara N. Pollock, Evangelos A. Coutsias, Tharun Kumar Allu, Sorel Muresan, Tudor I. Oprea. jcisd, 48(7):1311-1324, 2008. [doi]

2006

Algorithmic Search for Flexibility Using Resultants of Polynomial SystemsRobert H. Lewis, Evangelos A. Coutsias. adg 2007: 68-79 [doi]

Spectral element modeling of semiconductor heterostructuresGregory von Winckel, Sanjay Krishna, Evangelos A. Coutsias. mcm, 43(5-6):582-591, 2006. [doi]

2005

Rotational superposition and least squares: The SVD and quaternions approaches yield identical results. Reply to the preceding comment by G. KnellerEvangelos A. Coutsias, Chaok Seok, Ken A. Dill. jcc, 26(15):1663-1665, 2005. [doi]

2004

A kinematic view of loop closureEvangelos A. Coutsias, Chaok Seok, Matthew P. Jacobson, Ken A. Dill. jcc, 25(4):510-528, 2004. [doi]

Using quaternions to calculate RMSDEvangelos A. Coutsias, Chaok Seok, Ken A. Dill. jcc, 25(15):1849-1857, 2004. [doi]

1999

Pseudospectral Solution of the Two-Dimensional Navier-Stokes Equations in a DiskDavid J. Torres, Evangelos A. Coutsias. siamsc, 21(1):378-403, 1999. [doi]

1996

An efficient spectral method for ordinary differential equations with rational function coefficientsEvangelos A. Coutsias, Thomas Hagstrom, David Torres. moc, 65(214):611-635, 1996.

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