Robert J. Woods - researchr alias

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Viewing Publication 1 - 10 from 10

2018

Applying Pose Clustering and MD Simulations To Eliminate False Positives in Molecular DockingSpandana Makeneni, David F. Thieker, Robert J. Woods. jcisd, 58(3):605-614, 2018. [doi]

Defining the Specificity of Carbohydrate-Protein Interactions by Quantifying Functional Group ContributionsAmika Sood, Oksana O. Gerlits, Ye Ji, Nicolai V. Bovin, Leighton Coates, Robert J. Woods. jcisd, 58(9):1889-1901, 2018. [doi]

2017

Verbal response time and duration indices of deception in humans interviewed by a computer-generated agentDean A. Pollina, Robert J. Woods, C. David Salyer, T. Grant Leffingwell, Cynthia Cooper, John W. Rohrbaugh. ijmms, 97:23-33, 2017. [doi]

2014

BFMP: A Method for Discretizing and Visualizing Pyranose ConformationsSpandana Makeneni, Bethany Lachele Foley, Robert J. Woods. jcisd, 54(10):2744-2750, 2014. [doi]

Importance of ligand conformational energies in carbohydrate docking: Sorting the wheat from the chaffAnita K. Nivedha, Spandana Makeneni, Bethany Lachele Foley, Matthew B. Tessier, Robert J. Woods. jcc, 35(7):526-539, 2014. [doi]

2007

Gaussian induced dipole polarization modelDennis Elking, Tom Darden, Robert J. Woods. jcc, 28(7):1261-1274, 2007. [doi]

GLYCAM06: A generalizable biomolecular force field. CarbohydratesKarl Nicholas Kirschner, Austin B. Yongye, Sarah M. Tschampel, Jorge González-Outeiriño, Charlisa R. Daniels, B. Lachele Foley, Robert J. Woods. jcc, 29(4):622-655, 2007. [doi]

2005

The Amber biomolecular simulation programsDavid A. Case, Thomas E. Cheatham III, Tom Darden, Holger Gohlke, Ray Luo, Kenneth M. Merz Jr., Alexey Onufriev, Carlos Simmerling, Bing Wang, Robert J. Woods. jcc, 26(16):1668-1688, 2005. [doi]

2004

A hydration study of (1->4) and (1->6) linked alpha-glucans by comparative 10 ns molecular dynamics simulations and 500-MHz NMRFrancisco Corzana, Mohammed S. Motawia, Catherine Hervé du Penhoat, Serge Pérez, Sarah M. Tschampel, Robert J. Woods, Søren Balling Engelsen. jcc, 25(4):573-586, 2004. [doi]

2001

Solvated ensemble averaging in the calculation of partial atomic chargesMaral Basma, S. Sundara, Dilek Çalgan, Tereza Vernali, Robert J. Woods. jcc, 22(11):1125-1137, 2001. [doi]

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