Thuy-Diem Nguyen - researchr alias

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Viewing Publication 1 - 6 from 6

2015

Efficient agglomerative hierarchical clustering for biological sequence analysisThuy-Diem Nguyen. PhD thesis, Nanyang Technological University, Singapore, 2015. [doi]

Efficient and Accurate OTU Clustering with GPU-Based Sequence Alignment and Dynamic Dendrogram CuttingThuy-Diem Nguyen, Bertil Schmidt, Zejun Zheng, Chee Keong Kwoh. tcbb, 12(5):1060-1073, 2015. [doi]

2014

SparseHC: A Memory-efficient Online Hierarchical Clustering AlgorithmThuy-Diem Nguyen, Bertil Schmidt, Chee Keong Kwoh. iccs 2014: 8-19 [doi]

Fast dendrogram-based OTU clustering using sequence embeddingThuy-Diem Nguyen, Bertil Schmidt, Chee Keong Kwoh. bcb 2014: 63-72 [doi]

IFACEwat: the interfacial water-implemented re-ranking algorithm to improve the discrimination of near native structures for protein rigid dockingChinh Tran To Su, Thuy-Diem Nguyen, Jie Zheng, Chee Keong Kwoh. bmcbi, 15(S-16), 2014. [doi]

2011

CRiSPy-CUDA: Computing Species Richness in 16S rRNA Pyrosequencing Datasets with CUDAZejun Zheng, Thuy-Diem Nguyen, Bertil Schmidt. prib 2011: 37-49 [doi]

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