- Shayesteh Arasti, Siavash Mirarab. Median quartet tree search algorithms using optimal subtree prune and regraft. Algorithms for Molecular Biology, 19(1):12, December 2024.
- Hua-Ting Yao, Bertrand Marchand, Sarah J. Berkemer, Yann Ponty, Sebastian Will. Infrared: a declarative tree decomposition-powered framework for bioinformatics. Algorithms for Molecular Biology, 19(1):13, December 2024.
- Mateo Gray, Sebastian Will, Hosna Jabbari. SparseRNAfolD: optimized sparse RNA pseudoknot-free folding with dangle consideration. Algorithms for Molecular Biology, 19(1):9, December 2024.
- Zsuzsanna Lipták, Francesco Masillo, Simon J. Puglisi. Suffix sorting via matching statistics. Algorithms for Molecular Biology, 19(1):11, December 2024.
- Leonard Bohnenkämper. Recombinations, chains and caps: resolving problems with the DCJ-indel model. Algorithms for Molecular Biology, 19(1):8, December 2024.
- Diego Díaz-Domínguez, Miika Leinonen, Leena Salmela. Space-efficient computation of k-mer dictionaries for large values of k. Algorithms for Molecular Biology, 19(1):14, December 2024.
- Marília D. V. Braga, Leonie R. Brockmann, Katharina Klerx, Jens Stoye. Investigating the complexity of the double distance problems. Algorithms for Molecular Biology, 19(1):1, December 2024.
- Victor Epain, Rumen Andonov. Global exact optimisations for chloroplast structural haplotype scaffolding. Algorithms for Molecular Biology, 19(1):5, December 2024.
- Pawel Górecki 0001, Natalia Rutecka, Agnieszka Mykowiecka 0002, Jaroslaw Paszek. Unifying duplication episode clustering and gene-species mapping inference. Algorithms for Molecular Biology, 19(1):7, December 2024.
- Jason Fan, Jamshed Khan, Noor Pratap Singh, Giulio Ermanno Pibiri, Rob Patro. Fulgor: a fast and compact k-mer index for large-scale matching and color queries. Algorithms for Molecular Biology, 19(1):3, December 2024.