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- Baqiao Liu, Tandy J. Warnow. Weighted ASTRID: fast and accurate species trees from weighted internode distances. Algorithms for Molecular Biology, 18(1):6, December 2023.
- Giulio Ermanno Pibiri. On weighted k-mer dictionaries. Algorithms for Molecular Biology, 18(1):3, December 2023.
- Sebastian S. Schmidt, Jarno N. Alanko. Eulertigs: minimum plain text representation of k-mer sets without repetitions in linear time. Algorithms for Molecular Biology, 18(1):5, December 2023.
- Mohammad Fili, Guiping Hu, Changze Han, Alexa Kort, John Trettin, Hillel Haim. A classification algorithm based on dynamic ensemble selection to predict mutational patterns of the envelope protein in HIV-infected patients. Algorithms for Molecular Biology, 18(1):4, December 2023.
- Hua-Ting Yao, Ronny Lorenz, Ivo L. Hofacker, Peter F. Stadler. Mono-valent salt corrections for RNA secondary structures in the ViennaRNA package. Algorithms for Molecular Biology, 18(1):8, December 2023.
- Giulia Bernardini 0001, Leo van Iersel, Esther Julien, Leen Stougie. Constructing phylogenetic networks via cherry picking and machine learning. Algorithms for Molecular Biology, 18(1):13, December 2023.
- Ke Chen 0011, Mingfu Shao. Locality-sensitive bucketing functions for the edit distance. Algorithms for Molecular Biology, 18(1):7, December 2023.
- Veronica Guerrini, Alessio Conte, Roberto Grossi, Gianni Liti, Giovanna Rosone, Lorenzo Tattini. phyBWT2: phylogeny reconstruction via eBWT positional clustering. Algorithms for Molecular Biology, 18(1):11, December 2023.
- Seong-Hwan Jun, Hassan Nasif, Chris Jennings-Shaffer, David H. Rich, Anna Kooperberg, Mathieu Fourment, Cheng Zhang, Marc A. Suchard, Frederick A. Matsen IV. A topology-marginal composite likelihood via a generalized phylogenetic pruning algorithm. Algorithms for Molecular Biology, 18(1):10, December 2023.