Journal: BMC Bioinformatics

Volume 20-S, Issue 4

0 -- 0Ilaria Granata, Enrico Troiano, Mara Sangiovanni, Mario Rosario Guarracino. Integration of transcriptomic data in a genome-scale metabolic model to investigate the link between obesity and breast cancer
0 -- 0Mara Sangiovanni, Ilaria Granata, Amarinder Singh Thind, Mario Rosario Guarracino. From trash to treasure: detecting unexpected contamination in unmapped NGS data
0 -- 0Hamed Khakzad, Johan Malmström, Lars Malmström. Greedy de novo motif discovery to construct motif repositories for bacterial proteomes
0 -- 0Ismael Navas Delgado, José García-Nieto, Esteban López-Camacho, Maciej Rybinski, Rocio Lavado-Valenzuela, Miguel Ángel Berciano Guerrero, José Francisco Aldana Montes. VIGLA-M: visual gene expression data analytics
0 -- 0Fabio Fassetti, Claudia Giallombardo, Ofelia Leone, Luigi Palopoli, Simona E. Rombo, Adolfo Saiardi. FEDRO: a software tool for the automatic discovery of candidate ORFs in plants with c →u RNA editing
0 -- 0Michela Quadrini, Luca Tesei, Emanuela Merelli. An algebraic language for RNA pseudoknots comparison
0 -- 0Giovanni Perconti, Patrizia Rubino, Flavia Contino, Serena Bivona, Giorgio Bertolazzi, Michele Tumminello, Salvatore Feo, Agata Giallongo, Claudia Coronnello. RIP-Chip analysis supports different roles for AGO2 and GW182 proteins in recruiting and processing microRNA targets
0 -- 0Paolo Romano 0001, Arnaud Céol, Andreas Dräger, Antonino Fiannaca, Rosalba Giugno, Massimo La Rosa, Luciano Milanesi, Ulrich Pfeffer, Riccardo Rizzo, Soo-Yong Shin, Junfeng Xia, Alfonso Urso. The 2017 Network Tools and Applications in Biology (NETTAB) workshop: aims, topics and outcomes
0 -- 0Alessandro Zandonà, Rosario Vasta, Adriano Chiò, Barbara Di Camillo. A Dynamic Bayesian Network model for the simulation of Amyotrophic Lateral Sclerosis progression
0 -- 0Sandra Krüger, Rosario M. Piro. decompTumor2Sig: identification of mutational signatures active in individual tumors
0 -- 0Pierre Monnin, Joël Legrand, Graziella Husson, Patrice Ringot, Andon Tchechmedjiev, Clément Jonquet, Amedeo Napoli, Adrien Coulet. PGxO and PGxLOD: a reconciliation of pharmacogenomic knowledge of various provenances, enabling further comparison
0 -- 0Nicolas Sompairac, Jennifer Modamio, Emmanuel Barillot, Ronan M. T. Fleming, Andrei Zinovyev, Inna Kuperstein. Metabolic and signalling network maps integration: application to cross-talk studies and omics data analysis in cancer
0 -- 0Umberto Ferraro Petrillo, Mara Sorella, Giuseppe Cattaneo, Raffaele Giancarlo, Simona E. Rombo. Analyzing big datasets of genomic sequences: fast and scalable collection of k-mer statistics
0 -- 0Andrea Tangherloni, Simone Spolaor, Leonardo Rundo, Marco S. Nobile, Paolo Cazzaniga, Giancarlo Mauri, Pietro Liò, Ivan Merelli, Daniela Besozzi. GenHap: a novel computational method based on genetic algorithms for haplotype assembly
0 -- 0David R. Gilbert, Monika Heiner, Leila Ghanbar, Jacek Chodak. Spatial quorum sensing modelling using coloured hybrid Petri nets and simulative model checking
0 -- 0Alexander E. Kel, Ulyana Boyarskikh, Philip Stegmaier, Leonid S. Leskov, Andrey V. Sokolov, Ivan S. Yevshin, Nikita Mandrik, Daria Stelmashenko, Jeannette Koschmann, Olga V. Kel-Margoulis, Mathias Krull, Anna Martínez-Cardús, Sebastian Moran, Manel Esteller, Fedor A. Kolpakov, Maxim Filipenko, Edgar Wingender. Walking pathways with positive feedback loops reveal DNA methylation biomarkers of colorectal cancer