Journal: Computer Physics Communications

Volume 175, Issue 9

575 -- 582Jinn-Liang Liu, Jen-Hao Chen, O. Voskoboynikov. A model for semiconductor quantum dot molecule based on the current spin density functional theory
583 -- 603Songwon Seo, Oakkey Min. Axisymmetric SPH simulation of elasto-plastic contact in the low velocity impact
604 -- 611F. Yasar, K. Demir. The study of helix-coil transition of polyalanine with single histogram method
612 -- 619Veerle Ledoux, L. Gr. Ixaru, Margarit Rizea, Marnix Van Daele, Guido Vanden Berghe. Solution of the Schrödinger equation over an infinite integration interval by perturbation methods, revisited
620 -- 623Oliver Holub, Sérgio T. Ferreira. Quantitative histogram analysis of images
624 -- 627Chao-Hsi Chang, Jian-xiong Wang, Xing-Gang Wu. An upgraded version of the generator BCVEGPY2.0 for hadronic production of B::c:: meson and its excited states

Volume 175, Issue 8

511 -- 527S. Jadach, M. Skrzypek. Solving constrained Markovian evolution in QCD with the help of the non-Markovian Monte Carlo
528 -- 544S. Le Bourdiec, F. de Vuyst, L. Jacquet. Numerical solution of the Vlasov-Poisson system using generalized Hermite functions
545 -- 552Fanya Jin, Honghui Tong, Zhongbing Shi, Deli Tang, Paul K. Chu. Effects of external magnetic field on propagation of electromagnetic wave in uniform magnetized plasma slabs
553 -- 558Mehmet Dilaver, Semra Gündüç, Meral Aydin, Yigit Gündüç. Dynamic critical index of the Swendsen-Wang algorithm by dynamic finite-size scaling
559 -- 571M. Czakon. Automatized analytic continuation of Mellin-Barnes integrals
572 -- 573Poul Martin Hansen, Iva Marija Tolic-Nørrelykke, Henrik Flyvbjerg, Kirstine Berg-Sørensen. tweezercalib 2.1: Faster version of MatLab package for precise calibration of optical tweezers

Volume 175, Issue 7

451 -- 464M. M. Ali, Roger Smith, S. Hobday. The structure of atomic and molecular clusters, optimised using classical potentials
473 -- 481N. Mohankumar, Scott M. Auerbach. On time-step bounds in unitary quantum evolution using the Lanczos method
482 -- 486Baozeng Guo, Umberto Ravaioli, Maritin Staedele. Full band Monte Carlo calculations of velocity-field characteristics of wurtzite ZnO
487 -- 496S. Chumakov, E. Jankowski, F. V. Tkachov. Optimal Jet Finder (v1.0 C++)
497 -- 508Dirk Puetzfeld. PROCRUSTES: A computer algebra package for post-Newtonian calculations in General Relativity
509 -- 0N. Sanna, G. Morelli. Erratum to SCELib2: the new revision of SCELib, the parallel computational library of molecular properties in the single center approach [Computer Physics Communications 162 (2004) 51-78]

Volume 175, Issue 6

389 -- 396Peter V. Coveney, G. De Fabritiis, Matt J. Harvey, Stephen Pickles, A. R. Porter. Coupled applications on distributed resources
397 -- 403A. J. Zakrzewski. Highly precise solutions of the one-dimensional Schrödinger equation with an arbitrary potential
404 -- 415Robertas Balevicius, Algis Dziugys, Rimantas Kacianauskas, Algirdas Maknickas, K. Vislavicius. Investigation of performance of programming approaches and languages used for numerical simulation of granular material by the discrete element method
416 -- 423J. Qiang, D. Todd, D. Leitner. A 3D model for ion beam formation and transport simulation
424 -- 439Veerle Ledoux, Margarit Rizea, L. Gr. Ixaru, Guido Vanden Berghe, Marnix Van Daele. Solution of the Schrödinger equation by a high order perturbation method based on a linear reference potential
440 -- 450Andreu Badal, Josep Sempau. A package of Linux scripts for the parallelization of Monte Carlo simulations

Volume 175, Issue 5

315 -- 322Emmanuel Perrey-Debain, I. David Abrahams. A band factorization technique for transition matrix element asymptotics
323 -- 329I. J. Bush, I. T. Todorov, W. Smith. A DAFT DL_POLY distributed memory adaptation of the Smoothed Particle Mesh Ewald method
330 -- 338Dennis C. Smolarski, Ramesh Balakrishnan, Eduardo F. D Azevedo, John W. Fettig, Bronson Messer, Anthony Mezzacappa, Faisal Saied, Paul E. Saylor, F. Douglas Swesty. On the performance of SPAI and ADI-like preconditioners for core collapse supernova simulations in one spatial dimension
339 -- 347Cheng Zhang, Bhupesh Bansal, Paulo S. Branicio, Rajiv K. Kalia, Aiichiro Nakano, Ashish Sharma, Priya Vashishta. Collision-free spatial hash functions for structural analysis of billion-vertex chemical bond networks
348 -- 358J. Nikkinen, S. Fritzsche, S. Heinäsmäki. Revised and extended Utilities for the Ratip package
359 -- 371Fanis G. Kalatzis, Dimitrios G. Papageorgiou, Ioannis N. Demetropoulos. A programmable optimization environment using the GAMESS-US and MERLIN/MCL packages. Applications on intermolecular interaction energies
372 -- 380C. A. Bertulani, A. Gade. MOMDIS: a Glauber model computer code for knockout reactions
381 -- 387S. Pozzorini, E. Remiddi. Precise numerical evaluation of the two loop sunrise graph Master Integrals in the equal mass case

Volume 175, Issue 4

241 -- 249Zhongcheng Wang. Trigonometrically-fitted method for a periodic initial value problem with two frequencies
250 -- 263P. Popovich, W. A. Cooper, L. Villard. A full-wave solver of the Maxwell s equations in 3D cold plasmas
264 -- 268Juan Elezgaray, Michel Laguerre. A systematic method to derive force fields for coarse-grained simulations of phospholipids
269 -- 289Nobuyuki Aiba, Shinji Tokuda, Tomoko Ishizawa, Masao Okamoto. Extension of the Newcomb equation into the vacuum for the stability analysis of tokamak edge plasmas
290 -- 303Ulrich Ellwanger, Cyril Hugonie. NMHDECAY 2.1: An updated program for sparticle masses, Higgs masses, couplings and decay widths in the NMSSM
304 -- 313C. J. Gillan, A. Schuchinsky, I. Spence. Computing zeros of analytic functions in the complex plane without using derivatives

Volume 175, Issue 3

167 -- 179Axel Maas. Solving a set of truncated Dyson-Schwinger equations with a globally converging method
180 -- 195Stefan Bekavac. Calculation of massless Feynman integrals using harmonic sums
196 -- 203Yan Huo, Heng Liang, Fengshan Bai. An efficient algorithm for computing permanental polynomials of graphs
204 -- 211Barna Pongrácz, Gábor Szederkényi, Katalin M. Hangos. An algorithm for determining a class of invariants in quasi-polynomial systems
212 -- 225Edoardo Milotti. PLNoise: a package for exact numerical simulation of power-law noises
226 -- 231I. I. Guseinov, B. A. Mamedov, A. S. Ekenoglu. Exact analytical expressions and numerical analysis of two-center Franck-Condon factors and matrix elements over displaced harmonic oscillator wave functions
232 -- 239J. Monk, A. Pilkington. ExHuME 1.3: A Monte Carlo event generator for exclusive diffraction

Volume 175, Issue 2

73 -- 77A. Duncan, R. D. Sedgewick, R. D. Coalson. Fast Fourier Transform simulation techniques for Coulomb gases
78 -- 85Wenbin Lin, Narayan Kovvali, Lawrence Carin. Pseudospectral method based on prolate spheroidal wave functions for semiconductor nanodevice simulation
86 -- 92H. Schmitz, R. Grauer. Comparison of time splitting and backsubstitution methods for integrating Vlasov s equation with magnetic fields
93 -- 115Ronald Kleiss, Achilleas Lazopoulos. Error in Monte Carlo, quasi-error in Quasi-Monte Carlo
116 -- 121Rui P. S. Fartaria, Rodrigo S. Neves, Pedro C. R. Rodrigues, Filomena F. M. Freitas, Fernando M. S. Silva Fernandes. A time saving algorithm for the Monte Carlo method of Metropolis
122 -- 144Tobias Huber, Daniel Maître. HypExp, a Mathematica package for expanding hypergeometric functions around integer-valued parameters
145 -- 166T. Radtke, S. Fritzsche. Simulation of n-qubit quantum systems. II. Separability and entanglement

Volume 175, Issue 11-12

683 -- 691Jianhui Li, Zhongwu Zhou, Richard J. Sadus. Modified force decomposition algorithms for calculating three-body interactions via molecular dynamics
692 -- 699Zhongcheng Wang. Obrechkoff one-step method fitted with Fourier spectrum for undamped Duffing equation
700 -- 707Ayda Beddall, Andrew Beddall, Ahmet Bingül, Yilmaz Durmaz. Smoothed multi-variate histogrammed PDEs, and chi:::2::: optimisation
708 -- 712Thomas Schanze. An exact D-dimensional Tsallis random number generator for generalized simulated annealing
713 -- 720Colin W. Glass, Artem R. Oganov, Nikolaus Hansen. USPEX - Evolutionary crystal structure prediction
721 -- 737Y.-Y. Lian, K.-H. Hsu, Y.-L. Shao, Y. M. Lee, Y.-W. Jeng, J.-S. Wu. Parallel adaptive mesh-refining scheme on a three-dimensional unstructured tetrahedral mesh and its applications
738 -- 744Charlotte Froese Fischer, Gediminas Gaigalas, Yuri Ralchenko. Some corrections to GRASP92
745 -- 747F. A. Parpia, Charlotte Froese Fischer, I. P. Grant. GRASP92: a package for large-scale relativistic atomic structure calculations

Volume 175, Issue 10

629 -- 634B. B. Beard, M. Pepe, S. Riederer, U.-J. Wiese. Efficient cluster algorithm for CP(N-1) models
635 -- 649Giorgio Torrieri, S. Jeon, Jean Letessier, Johann Rafelski. SHAREv2: fluctuations and a comprehensive treatment of decay feed-down
650 -- 664Martin Kröger, Markus Hütter. Symbolic computation of the phoretic acceleration of convex particles suspended in a non-uniform gas
665 -- 677S. Tsuno, T. Kaneko, Y. Kurihara, S. Odaka, K. Kato. GR@PPA 2.7 event generator for pp/pp collisions
678 -- 681Marcin Brzuszek, Andrzej Daniluk. Multithreaded transactions in scientific computing: New versions of a computer program for kinematical calculations of RHEED intensity oscillations

Volume 175, Issue 1

1 -- 14Claudia Ambrosch-Draxl, Jorge O. Sofo. Linear optical properties of solids within the full-potential linearized augmented planewave method
15 -- 24X. Wu, J. F. Zhu, J. Z. He, H. Zhang. On stabilization of energy for Hamiltonian systems
25 -- 29Pei-Chi Wu, Kuo-Chan Huang. Parallel use of multiplicative congruential random number generators
30 -- 35Mikhail Z. Tokar, Denis Kalupin, Denis Pilipenko. Numerical solution of transport equations for plasmas with transport barriers
36 -- 40Hwee Kuan Lee, Yutaka Okabe, D. P. Landau. Convergence and refinement of the Wang-Landau algorithm
41 -- 51Simone Taioli, Jonathan Tennyson. WATERWAVES: wave particles dynamics on a complex triatomic potential
52 -- 66G. Gaigalas, S. Fritzsche, E. Gaidamauskas, G. Kirsanskas, T. Zalandauskas. Jahn - A program for representing atomic and nuclear states within an isospin basis
67 -- 71Georg K. H. Madsen, David J. Singh. BoltzTraP. A code for calculating band-structure dependent quantities