Journal: Genomics, Proteomics & Bioinformatics

Volume 7, Issue 4

147 -- 154Yimei Cai, Xiaomin Yu, Songnian Hu, Jun Yu. A Brief Review on the Mechanisms of miRNA Regulation
155 -- 162Zhiming Dai, Xianhua Dai, Qian Xiang, Jihua Feng. Nucleosomal Context of Binding Sites Influences Transcription Factor Binding Affinity and Gene Regulation
163 -- 174Shintaro Hirayama, Satoshi Mizuta. Significant Deviations in the Configurations of Homologous Tandem Repeats in Prokaryotic Genomes
175 -- 184Jia Jia, Qingzhong Xue. Codon Usage Biases of Transposable Elements and Host Nuclear Genes in Arabidopsis thaliana and Oryza sativa
185 -- 193A. Katiyar, S. K. Lenka, K. Lakshmi, V. Chinnusamy, K. C. Bansal. In Silico Characterization and Homology Modeling of Thylakoid-bound Ascorbate Peroxidase from a Drought Tolerant Wheat Cultivar
194 -- 199Fengfeng Zhou, Victor Olman, Ying Xu. Large-Scale Analyses of Glycosylation in Cellulases
200 -- 208Hualong Yu, Guochang Gu, Haibo Liu, Jing Shen, Jing Zhao. A Modified Ant Colony Optimization Algorithm for Tumor Marker Gene Selection

Volume 7, Issue 3

77 -- 86Chunyang Li, Ying Wang, Hao Peng, Hejiao Bian, Mingwei Min, Longfei Chen, Qian Liu, Jinku Bao. In silico Analysis of the Potential Infection Mechanisms of Magnaporthe grisea from Horizontal Gene Transfer Hypothesis
87 -- 95Babak Saffari, Hassan Mohabatkar. Computational Analysis of Cysteine Proteases (Clan CA, Family Cl) of Leishmania major to Find Potential Epitopic Regions
96 -- 106K. Vedhagiri, K. Natarajaseenivasan, P. Chellapandi, S. G. Prabhakaran, Joseph Selvin, S. Sharma, P. Vijayachari. Evolutionary Implication of Outer Membrane Lipoprotein-Encoding Genes ompL1, lipL32 and lipL41 of Pathogenic Leptospira Species
107 -- 115Guoqiang Zhang, Lingxia Zhang, Mingcheng Zhang, Linlin Pan, Fengyu Wang, Jun Huang, Guoli Li, Jun Yu, Songnian Hu. Screening and Assessing 11 Mycobacterium tuberculosis Proteins as Potential Serodiagnostical Markers for Discriminating TB Patients from BCG Vaccinees
116 -- 127Dapeng Wang, Song Zhang, Fuhong He, Jiang Zhu, Songnian Hu, Jun Yu. How Do Variable Substitution Rates Influence Ka and Ks Calculations?
128 -- 137Pantelis G. Bagos, Georgios N. Tsaousis, Stavros J. Hamodrakas. How Many 3D Structures Do We Need to Train a Predictor?
138 -- 142Costas P. Exarchos, Themis P. Exarchos, Costas Papaloukas, Anastassios N. Troganis, Dimitrios I. Fotiadis. PBOND: Web Server for the Prediction of Proline and Non-Proline cis I trans Isomerization
143 -- 146Qi Wang, Qun Liang, Xiuqing Zhang. 3D Genome Tuner: Compare Multiple Circular Genomes in a 3D Context

Volume 7, Issue 1-2

1 -- 12Wanling Yang, Dingge Ying, Yu-Lung Lau. In-depth cDNA Library Sequencing Provides Quantitative Gene Expression Profiling in Cancer Biomarker Discovery
13 -- 24Jian Li, Kai Wang, Shengting Li, Vera Timmermans-Wielenga, Fritz Rank, Carsten Wiuf, Xiuqing Zhang, Huanming Yang, Lars Bolund. DNA Copy Number Aberrations in Breast Cancer by Array Comparative Genomic Hybridization
25 -- 36Purnima Guda, Sridar V. Chittur, Chittibabu Guda. Comparative Analysis of Protein-Protein Interactions in Cancer-Associated Genes
37 -- 46Catharine Song, Aseem Kumar, Mazen Saleh. Bioinformatic Comparison of Bacterial Secretomes
47 -- 56Venkata R. S. K. Duvvuri, Bhargavi Duvvuri, Wilfred R. Cuff, Gillian E. Wu, Jianhong Wu. Role of Positive Selection Pressure on the Evolution of H5N1 Hemagglutinin
57 -- 61Mohd Danishuddin, Asad U. Khan. Phylogenetic Analysis of the Neuraminidase Gene Reveals that the H5N1 Strains Prevalent in Chickens During 2006 Bird Flu Outbreaks in Two Regions of Maharashtra, India Are Genetically Different
62 -- 70Mingfeng Li, Yanzhao Huang, Yi Xiao. A Method for Identification of Selenoprotein Genes in Archaeal Genomes
71 -- 76Antonio d Acierno, Angelo M. Facchiano, Anna Marabotti. GALT Protein Database, a Bioinformatics Resource for the Management and Analysis of Structural Features of a Galactosemia-related Protein and Its Mutants