Journal: IJDMB

Volume 14, Issue 4

293 -- 304Ik-Soo Huh, Taesung Park. Multifactor dimensionality reduction analysis of multiple binary traits for gene-gene interaction
305 -- 314Fen Wang, Baoxing Song, Dengyun Li, Xing Zhao, Yaotian Miao, Pengfei Jiang, Deli Zhang. PPIPP: an online protein-protein interaction network prediction and analysis platform
315 -- 331Chien-Pang Lee, Wen-Shin Lin. Using the two-population genetic algorithm with distance-based k-nearest neighbour voting classifier for high-dimensional data
332 -- 353Celal Öztürk, Selcuk Aslan. A new artificial bee colony algorithm to solve the multiple sequence alignment problem
354 -- 372Shengjun Li, Junliang Shang, Qinliang Chen, Yan Sun, Jin-Xing Liu. A compressed sensing based two-stage method for detecting epistatic interactions
373 -- 386Xi Wang, Peiyan Zhu, Tao Liu, Ke Xu. BioTopic: a topic-driven biological literature mining system

Volume 14, Issue 3

197 -- 209Jungsoo Gim, Sungkyoung Choi, Jongho Im, Jae-Kwang Kim, Taesung Park. A post-hoc genome-wide association study using matched samples
210 -- 228Hongfei Cao, Michael Phinney, Devin Petersohn, Benjamin Merideth, Chi-Ren Shyu. Mining large-scale repetitive sequences in a MapReduce setting
229 -- 257Han-Ming Liu, NiNi Rao, Dan Yang, Ling Yang, Yi Li, Feng-Biao Guo. Modified bagging of maximal information coefficient for genome-wide identification
258 -- 275Borong Shao, Niklas Lavesson, Veselka Boeva, Raja Khurram Shahzad. A mixture-of-experts approach for gene regulatory network inference
276 -- 291Zhenchao Jiang, Lishuang Li, Degen Huang. A general protein-protein interaction extraction architecture based on word representation and feature selection

Volume 14, Issue 2

101 -- 119Milan Vukicevic, Sandro Radovanovic, Boris Delibasic, Milija Suknovic. Extending meta-learning framework for clustering gene expression data with component-based algorithm design and internal evaluation measures
120 -- 138Yinjiao Ma, Lu Feng, Yusong Guo, Haijun Gong. Statistical analysis and probabilistic verification of stress-induced signalling pathways
139 -- 158Mehmet Kaya, Buket Kaya, Reda Alhajj. A novel multi-objective genetic algorithm for multiple sequence alignment
159 -- 176Murad M. Al-Rajab, Joan Lu. A study on the most common algorithms implemented for cancer gene search and classifications
177 -- 195Ren-Hao Pan, Rung Ching Chen, Elong Lin, Yung-Kuan Chan, Yung-fu Chen. Using genetic algorithm and maximum clique to design multiplex PCR primers for sequential deletion applications

Volume 14, Issue 1

1 -- 21Ana Stanescu 0001, Karthik Tangirala, Doina Caragea. Predicting alternatively spliced exons using semi-supervised learning
22 -- 39Ali Mohammadi Shanghooshabad, Mohammad Saniee Abadeh. Robust medical data mining using a clustering and swarm-based framework
40 -- 50Guan-Jie Hua, Che-Lun Hung, Chuan Yi Tang, Huiru Zheng. A simple algorithm for identifying integrons and gene cassettes in bacteria on next generation sequencing data
51 -- 70Tingting He, Peng Li, Xiaohua Hu, Xianjun Shen, Yan Wang, Junmin Zhao. A novel proteins complex identification based on connected affinity and multi-level seed extension
71 -- 85Yadunath Pathak, Prashant Singh Rana, P. K. Singh, Mukesh Saraswat. Protein structure prediction (RMSD ≤ 5 Å) using machine learning models
86 -- 99Basak Esin Köktürk, Bilge Karaçali. Annealing-based model-free expectation maximisation for multi-colour flow cytometry data clustering