Journal: J. Bioinformatics and Computational Biology

Volume 21, Issue 5

0 -- 0Jiasheng He, Shun Zhang, Chun Fang. AAindex-PPII: Predicting polyproline type II helix structure based on amino acid indexes with an improved BiGRU-TextCNN model
0 -- 0Konstantinos Lazaros, Panagiotis Vlamos, Aristidis G. Vrahatis. Methods for cell-type annotation on scRNA-seq data: A recent overview
0 -- 0Zizheng Yu, Zhijian Yin, Hongliang Zou. iAMY-RECMFF: Identifying amyloidgenic peptides by using residue pairwise energy content matrix and features fusion algorithm
0 -- 0Ying Zeng, Zheming Yuan, Yuan Chen, Ying Hu. CBDT-Oglyc: Prediction of O-glycosylation sites using ChiMIC-based balanced decision table and feature selection
0 -- 0Chao Li, Tianxiang Wang, Xiaohui Lin 0002. Analyzing omics data by feature combinations based on kernel functions

Volume 21, Issue 4

0 -- 0Carlos E. M. Relvas, Asuka Nakata, Guoan Chen, David G. Beer, Noriko Gotoh, André Fujita. A model-based clustering algorithm with covariates adjustment and its application to lung cancer stratification
0 -- 0Fuyan Hu, Bifeng Chen, Qing Wang, Zhiyuan Yang, Man Chu. Multi-omics data analysis reveals the biological implications of alternative splicing events in lung adenocarcinoma
0 -- 0Zhaoyang Hu, Qingsen Liu, Zhong Ni. Facilitating the drug repurposing with iC/E strategy: A practice on novel nNOS inhibitor discovery
0 -- 0Maria Waldl, Thomas Spicher, Ronny Lorenz, Irene K. Beckmann, Ivo L. Hofacker, Sarah von Löhneysen, Peter F. Stadler. Local RNA folding revisited
0 -- 0Hayat Ali Shah, Juan Liu 0007, Zhihui Yang, Feng Yang, Qiang Zhang, Jing Feng. DeepRT: Predicting compounds presence in pathway modules and classifying into module classes using deep neural networks based on molecular properties

Volume 21, Issue 3

0 -- 0Aiqing Ma, Xianhua Dai. The mechanism accounting for DNA damage strength modulation of p53 dynamical properties
0 -- 0Qi-Shi Song, Hai-jun Wu, Qian Lin, Yu-Kai Tang. Identification of a seven autophagy-related gene pairs signature for the diagnosis of colorectal cancer using the RankComp algorithm
0 -- 0Hongliang Zou, Zizheng Yu, Zhijian Yin. Integrating temporal and spatial variabilities for identifying ion binding proteins in phage
0 -- 0Jie-Huei Wang, Yi-Hau Chen. Overlapping group screening for binary cancer classification with TCGA high-dimensional genomic data
0 -- 0Pooja Rani, Kamlesh Dutta, Vijay Kumar. Drug synergy model for malignant diseases using deep learning
0 -- 0Büsra Özkan Kök, Yasemin Celik Altunoglu, Ali Burak Öncül, Abdulkadir Karaci, Mehmet Cengiz Baloglu. Expansin gene family database: A comprehensive bioinformatics resource for plant expansin multigene family

Volume 21, Issue 2

0 -- 0Standa Na, Dhammika Leshan Wannigama, Thammakorn Saethang. Antimicrobial peptides recognition using weighted physicochemical property encoding
0 -- 0Klairton Lima Brito, Andre Rodrigues Oliveira, Alexsandro Oliveira Alexandrino, Ulisses Dias, Zanoni Dias. Rearrangement distance with reversals, indels, and moves in intergenic regions on signed and unsigned permutations
0 -- 0Michael Khristichenko, Yuri M. Nechepurenko, Dmitry Grebennikov, Gennady Bocharov. Numerical study of chronic hepatitis B infection using Marchuk-Petrov model
0 -- 0Ke Chen, Lili Ge, Guorui Liu. Integrated in silico-in vitro rational design of oncogenic EGFR-derived specific monoclonal antibody-binding peptide mimotopes
0 -- 0Anna Dotsenko, Jury Denisenko, Dmitrii Osipov, Aleksandra Rozhkova, Ivan Zorov, Arkady Sinitsyn. Testing and improving the performance of protein thermostability predictors for the engineering of cellulases
0 -- 0Wei Xin Chan, Limsoon Wong. Obstacles to effective model deployment in healthcare

Volume 21, Issue 1

0 -- 0Ching-Nung Lin, Christine H. Chung, Aik Choon Tan. NuKit: A deep learning platform for fast nucleus segmentation of histopathological images
0 -- 0Mukhtar Ahmad Sofi, M. Arif Wani. RiRPSSP: A unified deep learning method for prediction of regular and irregular protein secondary structures
0 -- 0Zi-yi He, Jie-Yu Yang, Yong Li. A pharmacokinetic model based on the SSA-1DCNN-Attention method
0 -- 0Wilson Wen Bin Goh, Weijia Kong, Limsoon Wong. Evaluating network-based missing protein prediction using p-values, Bayes Factors, and probabilities
0 -- 0Hui-Ling Huang, Chong-Heng Weng, Torbjörn E. M. Nordling, Yi-Fan Liou. ThermalProGAN: A sequence-based thermally stable protein generator trained using unpaired data
0 -- 0Yonglin Zhang, Mei Hu, Qi Mo, Wenli Gan, Jiesi Luo. 4-methylcytosine sites based on deep forest algorithm
0 -- 0Andrea Mae Añonuevo, Marineil C. Gomez, Lemmuel Lara Tayo. In silico de novo drug design of a therapeutic peptide inhibitor against UBE2C in breast cancer
0 -- 0Jayanta Pal, Sourav Saha, Bansibadan Maji, Dilip Kumar Bhattacharya. PTGAC Model: A machine learning approach for constructing phylogenetic tree to compare protein sequences