Journal: Nat. Mach. Intell.

Volume 2, Issue 9

487 -- 0. Algorithms to live by
488 -- 490Stuart McLennan, Amelia Fiske, Leo Anthony Celi, Ruth Müller, Jan Harder, Konstantin Ritt, Sami Haddadin, Alena Buyx. An embedded ethics approach for AI development
491 -- 0Shakir Mohamed. Domesticating the techno-racial project
492 -- 493Hugo Merchant, Oswaldo Pérez. Estimating time with neural networks
494 -- 499Mauro Birattari, Antoine Ligot, Ken Hasselmann. Disentangling automatic and semi-automatic approaches to the optimization-based design of control software for robot swarms
500 -- 508Yue Cao, Thomas Andrew Geddes, Jean Yee Hwa Yang, Pengyi Yang. Ensemble deep learning in bioinformatics
509 -- 517Kyle Mills, Pooya Ronagh, Isaac Tamblyn. Finding the ground state of spin Hamiltonians with reinforcement learning
518 -- 528Christian Pek, Stefanie Manzinger, Markus Koschi, Matthias Althoff. Using online verification to prevent autonomous vehicles from causing accidents
529 -- 539Erwan Le Merrer, Gilles Trédan. Remote explainability faces the bouncer problem
540 -- 550Cen Wan, David T. Jones. Protein function prediction is improved by creating synthetic feature samples with generative adversarial networks
551 -- 0Shuangjia Zheng, Yongjian Li, Sheng Chen, Jun Xu 0017, Yuedong Yang. Publisher Correction: Predicting drug-protein interaction using quasi-visual question answering system

Volume 2, Issue 8

419 -- 0. Next chapter in artificial writing
420 -- 422Edmund R. Hunt, Sabine Hauert. A checklist for safe robot swarms
423 -- 425Payal Dhar. The carbon impact of artificial intelligence
426 -- 427Yunan Luo, Jian Peng 0001, Jianzhu Ma. When causal inference meets deep learning
428 -- 436Sebastian Risi, Julian Togelius. Increasing generality in machine learning through procedural content generation
437 -- 446Hiroyuki Suzuki, Robert J. Wood. Origami-inspired miniature manipulator for teleoperated microsurgery
447 -- 456Qin Cao, Zhenghao Zhang, Alexander Xi Fu, Qiong Wu, Tin-Lap Lee, Eric Lo, Alfred S. L. Cheng, Chao Cheng, Danny Leung, Kevin Y. Yip. A unified framework for integrative study of heterogeneous gene regulatory mechanisms
457 -- 465Wiktor Beker, Agnieszka Wolos, Sara Szymkuc, Bartosz Grzybowski. Minimal-uncertainty prediction of general drug-likeness based on Bayesian neural networks
466 -- 475Fei Tan, Tian Tian, Xiurui Hou, Xiang Yu, Lei Gu, Fernanda Mafra, Brian D. Gregory, Zhi Wei, Hakon Hakonarson. Elucidation of DNA methylation on N6-adenine with deep learning
476 -- 486Patrick Schramowski, Wolfgang Stammer, Stefano Teso, Anna Brugger, Franziska Herbert, Xiaoting Shao, Hans-Georg Luigs, Anne-Katrin Mahlein, Kristian Kersting. Making deep neural networks right for the right scientific reasons by interacting with their explanations

Volume 2, Issue 7

363 -- 0. Technology can't fix this
364 -- 0Laura Aymerich-Franch. Why it is time to stop ostracizing social robots
365 -- 366Asaf Tzachor, Jess Whittlestone, Lalitha Sundaram, Seán Ó hÉigeartaigh. Artificial intelligence in a crisis needs ethics with urgency
367 -- 368Jan Hoinka, Teresa M. Przytycka. Embedding gene sets in low-dimensional space
369 -- 375Mattia C. F. Prosperi, Yi Guo 0005, Matthew Sperrin, James S. Koopman, Jae S. Min, Xing He 0003, Shannan N. Rich, Mo Wang, Iain E. Buchan, Jiang Bian 0001. Causal inference and counterfactual prediction in machine learning for actionable healthcare
376 -- 386Shinya Tasaki, Chris Gaiteri, Sara Mostafavi, Yanling Wang. Deep learning decodes the principles of differential gene expression
387 -- 395Sheng Wang, Emily R. Flynn, Russ B. Altman. Gaussian embedding for large-scale gene set analysis
396 -- 402Dries Sels, Hesam Dashti, Samia Mora, Olga Demler, Eugene Demler. Quantum approximate Bayesian computation for NMR model inference
403 -- 410Babak Rahmani, Damien Loterie, Eirini Kakkava, Navid Borhani, Ugur Tegin, Demetri Psaltis, Christophe Moser. Actor neural networks for the robust control of partially measured nonlinear systems showcased for image propagation through diffuse media
411 -- 418Yuri Tolkach, Tilmann Dohmgörgen, Marieta Toma, Glen Kristiansen. High-accuracy prostate cancer pathology using deep learning

Volume 2, Issue 6

291 -- 0. Finding a role for AI in the pandemic
292 -- 0José Anchieta C. C. Nunes, Igor C. S. Cruz, André Nunes, Hudson Pinheiro. Speeding up coral reef conservation with AI-aided automated image analysis
293 -- 294Nathan Peiffer-Smadja, Redwan Maatoug, François-Xavier Lescure, Eric D'ortenzio, Joelle Pineau, Jean-Rémi King. Machine Learning for COVID-19 needs global collaboration and data-sharing
295 -- 297Miguel A. Luengo-Oroz, Katherine Hoffmann Pham, Joseph Bullock, Robert Kirkpatrick, Alexandra Luccioni, Sasha Rubel, Cedric Wachholz, Moez Chakchouk, Phillippa Biggs, Tim Nguyen, Tina Purnat, Bernardo Mariano. Artificial intelligence cooperation to support the global response to COVID-19
301 -- 304Yann Sweeney. Tracking the debate on COVID-19 surveillance tools
305 -- 311Georgios Kaissis, Marcus R. Makowski, Daniel Rueckert, Rickmer Braren. Secure, privacy-preserving and federated machine learning in medical imaging
312 -- 316Fei Wu, Cewu Lu, Mingjie Zhu, Hao Chen 0011, Jun Zhu, Kai Yu 0004, Lei Li, Ming Li, Qianfeng Chen, Xi Li, Xudong Cao, Zhongyuan Wang, Zhengjun Zha, Yueting Zhuang, Yunhe Pan. Towards a new generation of artificial intelligence in China
317 -- 324Changjun Fan, Li Zeng, Yizhou Sun, Yang-Yu Liu. Finding key players in complex networks through deep reinforcement learning
325 -- 336Stanislaw Wozniak, Angeliki Pantazi, Thomas Bohnstingl, Evangelos Eleftheriou. Deep learning incorporating biologically inspired neural dynamics and in-memory computing
337 -- 346Yong Wang, Mengqi Ji, Shengwei Jiang, Xukang Wang, Jiamin Wu, Feng Duan, Jingtao Fan, Laiqiang Huang, Shaohua Ma, Lu Fang, Qionghai Dai. Augmenting vascular disease diagnosis by vasculature-aware unsupervised learning
347 -- 355Lixiang Hong, Jinjian Lin, Shuya Li, Fangping Wan, Hui Yang, Tao Jiang 0001, Dan Zhao, Jianyang Zeng. A novel machine learning framework for automated biomedical relation extraction from large-scale literature repositories
356 -- 362Mika Sarkin Jain, Tarik F. Massoud. Predicting tumour mutational burden from histopathological images using multiscale deep learning

Volume 2, Issue 5

239 -- 0. A match for virtual conferences
240 -- 241Andreagiovanni Reina. Robot teams stay safe with blockchains
242 -- 244Edoardo Sinibaldi, Chris Gastmans, Miguel Yáñez, Richard M. Lerner, László Kovács, Carlo Casalone, Renzo Pegoraro, Vincenzo Paglia. Contributions from the Catholic Church to ethical reflections in the digital era
245 -- 253Bo Pang, Kaiwen Zha, Hanwen Cao, Jiajun Tang, Minghui Yu, Cewu Lu. Complex sequential understanding through the awareness of spatial and temporal concepts
254 -- 265Panagiotis-Christos Kotsias, Josep Arús-Pous, Hongming Chen, Ola Engkvist, Christian Tyrchan, Esben Jannik Bjerrum. Direct steering of de novo molecular generation with descriptor conditional recurrent neural networks
266 -- 273Oleg S. Pianykh, Steven Guitron, Darren Parke, Chengzhao Zhang, Pari Pandharipande, James Brink, Daniel Rosenthal. Improving healthcare operations management with machine learning
274 -- 282Pritam Mukherjee, Mu Zhou, Edward Lee, Anne Schicht, Yoganand Balagurunathan, Sandy Napel, Robert J. Gillies, Simon Wong, Alexander Thieme, Ann Leung, Olivier Gevaert. A shallow convolutional neural network predicts prognosis of lung cancer patients in multi-institutional computed tomography image datasets
283 -- 288Li Yan, Hai-Tao Zhang, Jorge M. Gonçalves, Yang Xiao, Maolin Wang, Yuqi Guo, Chuan Sun, Xiuchuan Tang, Liang Jing, Mingyang Zhang, Xiang Huang, Ying Xiao, Haosen Cao, Yanyan Chen, Tongxin Ren, Fang Wang, Yaru Xiao, Sufang Huang, Xi Tan, Niannian Huang, Bo Jiao, Cheng Cheng, Yong Zhang, Ailin Luo, Laurent Mombaerts, Junyang Jin, Zhiguo Cao 0001, Shusheng Li, Hui Xu, Ye Yuan 0002. An interpretable mortality prediction model for COVID-19 patients
289 -- 0. Publisher Correction: Pandemic data challenges

Volume 2, Issue 4

193 -- 0. Pandemic data challenges
194 -- 196Aimun A. B. Jamjoom, Ammer M. A. Jamjoom, Hani J. Marcus. Exploring public opinion about liability and responsibility in surgical robotics
197 -- 199Julia Stoyanovich, Jay J. Van Bavel, Tessa V. West. The imperative of interpretable machines
200 -- 209Benjamin A. Rizkin, Albert S. Shkolnik, Neil J. Ferraro, Ryan L. Hartman. Combining automated microfluidic experimentation with machine learning for efficient polymerization design
210 -- 219William Lotter, Gabriel Kreiman, David D. Cox. A neural network trained for prediction mimics diverse features of biological neurons and perception
220 -- 227Ruibang Luo, Chak-Lim Wong, Yat-Sing Wong, Chi Ian Tang, Chi-Man Liu, Chi Ming Leung, Tak Wah Lam. Exploring the limit of using a deep neural network on pileup data for germline variant calling
228 -- 235Valery Vishnevskiy, Jonas Walheim, Sebastian Kozerke. Deep variational network for rapid 4D flow MRI reconstruction
236 -- 0Noorul Amin, Annette McGrath, Yi-Ping Phoebe Chen. Author Correction: Evaluation of deep learning in non-coding RNA classification
237 -- 0Kevin Faust, Sudarshan Bala, Randy van Ommeren, Alessia Portante, Raniah Al Qawahmed, Ugljesa Djuric, Phedias Diamandis. Publisher Correction: Intelligent feature engineering and ontological mapping of brain tumour histomorphologies by deep learning

Volume 2, Issue 3

151 -- 0. Into the latent space
152 -- 0Adam Poulsen, Eduard Fosch Villaronga, Roger Andre Søraa. Queering machines
153 -- 154Trenton A. Jerde. The path of foundational research in robotics
155 -- 156Luca Manneschi, Eleni Vasilaki. An alternative to backpropagation through time
157 -- 160Jason Kamran Eshraghian. Human ownership of artificial creativity
161 -- 170Man-Fai Ng, Jin Zhao, Qingyu Yan, Gareth John Conduit, Zhi Wei Seh. Predicting the state of charge and health of batteries using data-driven machine learning
171 -- 180Michael Moret, Lukas Friedrich, Francesca Grisoni, Daniel Merk, Gisbert Schneider. Generative molecular design in low data regimes
181 -- 191Nabil Imam, Thomas A. Cleland. Rapid online learning and robust recall in a neuromorphic olfactory circuit

Volume 2, Issue 2

83 -- 0. The only game in town
84 -- 0Jeffrey L. Furman, Florenta Teodoridis. Machine learning could improve innovation policy
85 -- 0Nicolas Spatola. The citizen at the centre of ethics
86 -- 88Abubakar Abid, Ali Abdalla, Ali Abid, Dawood Khan, Abdulrahman Alfozan, James Zou 0001. An online platform for interactive feedback in biomedical machine learning
89 -- 91Rafael A. Calvo, Dorian Peters, Stephen Cave. Advancing impact assessment for intelligent systems
92 -- 93Jessica S. Horst, Chris M. Bird. Conceptual systems align to aid concept learning
94 -- 103Frank Cichos, Kristian Gustavsson, Bernhard Mehlig, Giovanni Volpe. Machine learning for active matter
104 -- 115Alvin I. Chen, Max L. Balter, Timothy J. Maguire, Martin L. Yarmush. Deep learning robotic guidance for autonomous vascular access
116 -- 123Menglun Wang, Zixuan Cang, Guo-Wei Wei 0001. A topology-based network tree for the prediction of protein-protein binding affinity changes following mutation
124 -- 133Leonie Zeune, Yoeri E. Boink, Guus van Dalum, Afroditi Nanou, Sanne de Wit, Kiki C. Andree, Joost F. Swennenhuis, Stephan A. van Gils, Leon W. M. M. Terstappen, Christoph Brune. Deep learning of circulating tumour cells
134 -- 140Shuangjia Zheng, Yongjian Li, Sheng Chen, Jun Xu 0017, Yuedong Yang. Predicting drug-protein interaction using quasi-visual question answering system
141 -- 150Qi Yan, Daniel E. Weeks, Hongyi Xin, Anand Swaroop, Emily Y. Chew, Heng Huang, Ying Ding 0003, Wei Chen 0074. Deep-learning-based prediction of late age-related macular degeneration progression

Volume 2, Issue 12

729 -- 0. Research, reuse, repeat
730 -- 0Katarzyna Nowaczyk-Basinska, Stephen Cave. Let's talk about digital death
731 -- 736Cameron Buckner. Understanding adversarial examples requires a theory of artefacts for deep learning
737 -- 748Ge Wang 0001, Jong Chul Ye, Bruno De Man. Deep learning for tomographic image reconstruction
749 -- 752Somesh Mohapatra, Tzuhsiung Yang, Rafael Gómez-Bombarelli. Reusability report: Designing organic photoelectronic molecules with descriptor conditional recurrent neural networks
753 -- 763Daniel Tanneberg, Elmar Rueckert, Jan Peters 0001. Evolutionary training and abstraction yields algorithmic generalization of neural computers
764 -- 771Ngoc Hieu Tran, Rui Qiao 0001, Lei Xin, Xin Chen, Baozhen Shan, Ming Li. Personalized deep learning of individual immunopeptidomes to identify neoantigens for cancer vaccines
772 -- 782Zhi Chen, Yijie Bei, Cynthia Rudin. Concept whitening for interpretable image recognition
783 -- 790David C. Schedl, Indrajit Kurmi, Oliver Bimber. Search and rescue with airborne optical sectioning
791 -- 799Paul Bertens, Seong-Whan Lee. Network of evolvable neural units can learn synaptic learning rules and spiking dynamics
800 -- 809Soeren Lukassen, Foo Wei Ten, Lukas Adam, Roland Eils, Christian Conrad. Gene set inference from single-cell sequencing data using a hybrid of matrix factorization and variational autoencoders
810 -- 824Jiayun Dong, Cynthia Rudin. Exploring the cloud of variable importance for the set of all good models

Volume 2, Issue 11

653 -- 0. Materializing artificial intelligence
654 -- 0Isabella Hermann. Beware of fictional AI narratives
655 -- 657Jathan Sadowski, Mark Andrejevic. More than a few bad apps
658 -- 660Aslan Miriyev, Mirko Kovac. Skills for physical artificial intelligence
661 -- 662Michael Milford. C. Elegans inspires self-driving cars
663 -- 664Dongdong Jin, Li Zhang 0010. Embodied intelligence weaves a better future
665 -- 673Robert Geirhos, Jörn-Henrik Jacobsen, Claudio Michaelis, Richard S. Zemel, Wieland Brendel, Matthias Bethge, Felix A. Wichmann. Shortcut learning in deep neural networks
674 -- 683Mikhail Genkin, Tatiana A. Engel. Moving beyond generalization to accurate interpretation of flexible models
684 -- 692Jacob Levy Abitbol, Márton Karsai. Interpretable socioeconomic status inference from aerial imagery through urban patterns
693 -- 703Lifei Wang, Rui Nie, Zeyang Yu, Ruyue Xin, Caihong Zheng, Zhang Zhang, Jiang Zhang, Jun Cai. An interpretable deep-learning architecture of capsule networks for identifying cell-type gene expression programs from single-cell RNA-sequencing data
704 -- 710Rohit Batra, Carmen Chen, Tania G. Evans, Krista S. Walton, Rampi Ramprasad. Prediction of water stability of metal-organic frameworks using machine learning
711 -- 718Lukas Dekanovsky, Bahareh Khezri, Zdenka Rottnerova, Filip Novotný, Jan Plutnar, Martin Pumera. Chemically programmable microrobots weaving a web from hormones
719 -- 726Olle G. Holmberg, Niklas D. Köhler, Thiago Martins, Jakob Siedlecki, Tina Herold, Leonie Keidel, Ben Asani, Johannes Schiefelbein, Siegfried Priglinger, Karsten U. Kortuem, Fabian J. Theis. Self-supervised retinal thickness prediction enables deep learning from unlabelled data to boost classification of diabetic retinopathy
727 -- 0Marcus Ludwig, Louis-Félix Nothias, Kai Dührkop, Irina Koester, Markus Fleischauer, Martin A. Hoffmann, Daniel Petras, Fernando Vargas, Mustafa Morsy, Lihini Aluwihare, Pieter C. Dorrestein, Sebastian Böcker. Publisher Correction: Database-independent molecular formula annotation using Gibbs sampling through ZODIAC

Volume 2, Issue 10

553 -- 0. Call to action for robotics
554 -- 556Bilal A. Mateen, James Liley, Alastair K. Denniston, Chris C. Holmes, Sebastian J. Vollmer. Improving the quality of machine learning in health applications and clinical research
557 -- 558Eliska Greplova. Solving optimization tasks in condensed matter
559 -- 565Jaron Porciello, Maryia Ivanina, Maidul Islam, Stefan Einarson, Haym Hirsh. Accelerating evidence-informed decision-making for the Sustainable Development Goals using machine learning
566 -- 572Ajmal Zemmar, Andres M. Lozano, Bradley J. Nelson. The rise of robots in surgical environments during COVID-19
573 -- 584José Jiménez-Luna, Francesca Grisoni, Gisbert Schneider. Drug discovery with explainable artificial intelligence
585 -- 594Samik Banerjee, Lucas Magee, DingKang Wang, Xu Li 0003, Bing-Xing Huo, Jaikishan Jayakumar, Katherine Matho, Meng-Kuan Lin, Keerthi Ram, Mohanasankar Sivaprakasam, Z. Josh Huang, Yusu Wang, Partha P. Mitra. Semantic segmentation of microscopic neuroanatomical data by combining topological priors with encoder-decoder deep networks
595 -- 606James W. Martin, Bruno Scaglioni, Joseph C. Norton, Venkataraman Subramanian, Alberto Arezzo, Keith L. Obstein, Pietro Valdastri. Enabling the future of colonoscopy with intelligent and autonomous magnetic manipulation
607 -- 618Jian Hu, Xiangjie Li, Gang Hu, Yafei Lyu, Katalin Susztak, Mingyao Li. Iterative transfer learning with neural network for clustering and cell type classification in single-cell RNA-seq analysis
619 -- 628Anthony Culos, Amy Tsai, Natalie Stanley, Martin Becker, Mohammad Sajjad Ghaemi, David Mcilwain, Ramin Fallahzadeh, Athena Tanada, Huda Nassar, Camilo Espinosa, Maria Xenochristou, Edward Ganio, Laura Peterson, Xiaoyuan Han, Ina A. Stelzer, Kazuo Ando, Dyani Gaudilliere, Thanaphong Phongpreecha, Ivana Maric, Alan L. Chang, Gary M. Shaw, David K. Stevenson, Sean Bendall, Kara L. Davis, Wendy J. Fantl, Garry P. Nolan, Trevor Hastie, Robert Tibshirani, Martin S. Angst, Brice Gaudilliere, Nima Aghaeepour. Integration of mechanistic immunological knowledge into a machine learning pipeline improves predictions
629 -- 641Marcus Ludwig, Louis-Félix Nothias, Kai Dührkop, Irina Koester, Markus Fleischauer, Martin A. Hoffmann, Daniel Petras, Fernando Vargas, Mustafa Morsy, Lihini Aluwihare, Pieter C. Dorrestein, Sebastian Böcker. Database-independent molecular formula annotation using Gibbs sampling through ZODIAC
642 -- 652Mathias Lechner, Ramin M. Hasani, Alexander Amini, Thomas A. Henzinger, Daniela Rus, Radu Grosu. Neural circuit policies enabling auditable autonomy

Volume 2, Issue 1

1 -- 0. Let's go 2020
2 -- 9Alexander S. Rich, Cynthia Rudin, David M. P. Jacoby, Robin Freeman, Oliver R. Wearn, Henry Shevlin, Kanta Dihal, Seán S. ÓhÉigeartaigh, James Butcher, Marco Lippi 0001, Przemyslaw Palka, Paolo Torroni, Shannon Wongvibulsin, Edmon Begoli, Gisbert Schneider, Stephen Cave, Mona Sloane, Emmanuel Moss, Iyad Rahwan, Ken Goldberg, David Howard, Luciano Floridi, Jack Stilgoe. AI reflections in 2019
10 -- 12Andreas Theodorou, Virginia Dignum. Towards ethical and socio-legal governance in AI
13 -- 15Jiuyong Li, Lin Liu 0003, Thuc Duy Le, Jixue Liu. Accurate data-driven prediction does not mean high reproducibility
16 -- 17Wojciech Samek. Learning with explainable trees
18 -- 24Maria Littmann, Katharina Selig, Liel Cohen-Lavi, Yotam Frank, Peter Hönigschmid, Evans Kataka, Anja Mösch, Kun Qian 0003, Avihai Ron, Sebastian Schmid, Adam Sorbie, Liran Szlak, Ayana Dagan-Wiener, Nir Ben-Tal, Masha Y. Niv, Daniel Razansky, Björn W. Schuller, Donna P. Ankerst, Tomer Hertz, Burkhard Rost. Validity of machine learning in biology and medicine increased through collaborations across fields of expertise
25 -- 33Wenzhi Mao, Wenze Ding, Yaoguang Xing, Haipeng Gong. AmoebaContact and GDFold as a pipeline for rapid de novo protein structure prediction
34 -- 42Dongwook Lee 0005, Won-Jin Moon, Jong Chul Ye. Assessing the importance of magnetic resonance contrasts using collaborative generative adversarial networks
43 -- 55Indranil Chakraborty, Deboleena Roy, Isha Garg, Aayush Ankit, Kaushik Roy 0001. Constructing energy-efficient mixed-precision neural networks through principal component analysis for edge intelligence
56 -- 67Scott M. Lundberg, Gabriel G. Erion, Hugh Chen, Alex J. DeGrave, Jordan M. Prutkin, Bala Nair, Ronit Katz, Jonathan Himmelfarb, Nisha Bansal, Su-In Lee. From local explanations to global understanding with explainable AI for trees
68 -- 75Toby Howison, Josie Hughes, Fumiya Iida. Large-scale automated investigation of free-falling paper shapes via iterative physical experimentation
76 -- 82Brett D. Roads, Bradley C. Love. Learning as the unsupervised alignment of conceptual systems