- Arash Keshavarzi Arshadi, Milad Salem, Heather Karner, Kristle Garcia, Abolfazl Arab, Jiann-shiun Yuan, Hani Goodarzi. Functional microRNA-targeting drug discovery by graph-based deep learning. Patterns, 5(1):100909, January 2024.
- Jenna Kefeli, Nicholas P. Tatonetti. TCGA-Reports: A machine-readable pathology report resource for benchmarking text-based AI models. Patterns, 5(3):100933, March 2024.
- Hyeontae Jo, Hyukpyo Hong, Hyung Ju Hwang, Won Chang, Jae Kyoung Kim. Density physics-informed neural networks reveal sources of cell heterogeneity in signal transduction. Patterns, 5(2):100899, 2024.
- Jun Wen, Jue Hou, Clara-Lea Bonzel, Yihan Zhao, Victor M. Castro, Vivian S. Gainer, Dana Weisenfeld, Tianrun Cai, Yuk-Lam Ho, Vidul Ayakulangara Panickan, Lauren Costa, Chuan Hong, J. Michael Gaziano, Katherine P. Liao, Junwei Lu, Kelly Cho, Tianxi Cai. LATTE: Label-efficient incident phenotyping from longitudinal electronic health records. Patterns, 5(1):100906, January 2024.
- Suraj Rajendran, Weishen Pan, Mert R. Sabuncu, Yong Chen, Jiayu Zhou, Fei Wang 0001. Learning across diverse biomedical data modalities and cohorts: Challenges and opportunities for innovation. Patterns, 5(2):100913, 2024.
- Brandon Theodorou, Lucas Glass, Cao Xiao, Jimeng Sun 0001. FRAMM: Fair ranking with missing modalities for clinical trial site selection. Patterns, 5(3):100944, March 2024.
- Weishen Pan, Zhenxing Xu, Suraj Rajendran, Fei Wang 0001. An adaptive federated learning framework for clinical risk prediction with electronic health records from multiple hospitals. Patterns, 5(1):100898, January 2024.
- Li-Ju Wang, Michael Ning, Tapsya Nayak, Michael J. Kasper, Satdarshan P. Monga, Yufei Huang, Yidong Chen, Yu-Chiao Chiu. shinyDeepDR: A user-friendly R Shiny app for predicting anti-cancer drug response using deep learning. Patterns, 5(2):100894, 2024.
- Roel Roscam Abbing, Robert W. Gehl. Shifting your research from X to Mastodon? Here's what you need to know. Patterns, 5(1):100914, January 2024.
- Fengda Zhang, Zitao Shuai, Kun Kuang, Fei Wu, Yueting Zhuang, Jun Xiao. Unified fair federated learning for digital healthcare. Patterns, 5(1):100907, January 2024.