Journal: Supercomput. Front. Innov.

Volume 7, Issue 4

4 -- 15Takashi Soga, Kenta Yamaguchi, Raghunandan Mathur, Osamu Watanabe, Akihiro Musa, Ryusuke Egawa, Hiroaki Kobayashi. Effects of Using a Memory Stalled Core for Handling MPI Communication Overlapping in the SOR Solver on SX-ACE and SX-Aurora TSUBASA
16 -- 31Rigel F. C. Alves, Andreas Knüpfer. Enhancing the in Situ Visualization of Performance Data in Parallel CFD Applications
32 -- 48Michael R. Zielewski, Mulya Agung, Ryusuke Egawa, Hiroyuki Takizawa. Improving Quantum Annealing Performance on Embedded Problems
49 -- 61Ilya V. Afanasyev. Developing an Architecture-independent Graph Framework for Modern Vector Processors and NVIDIA GPUs
62 -- 67Vladimir A. Fedorov, Ekaterina G. Kholina, Ilya B. Kovalenko, Nikita B. Gudimchuk, Philipp S. Orekhov, Artem A. Zhmurov. Update on Performance Analysis of Different Computational Architectures: Molecular Dynamics in Application to Protein-Protein Interactions
68 -- 79Vadim M. Volokhov, Elena S. Amosova, Alexander V. Volokhov, Tatiana S. Zyubina, David B. Lempert, Leonid S. Yanovskiy, Ilya D. Fateev. Computer Design of Structure of Molecules of High-Energy Tetrazines. Calculation of Thermochemical Properties

Volume 7, Issue 3

0 -- 0Alexey V. Sulimov, Danil C. Kutov, Anna S. Taschilova, Ivan S. Ilin, Nadezhda V. Stolpovskaya, Khidmet S. Shikhaliev, Vladimir B. Sulimov. In Search of Non-covalent Inhibitors of SARS-CoV-2 Main Protease: Computer Aided Drug Design Using Docking and Quantum Chemistry
0 -- 0Dmitry S. Druzhilovskiy, Leonid A. Stolbov, Polina I. Savosina, Pavel V. Pogodin, Dmitry Filimonov, Alexander V. Veselovsky, Karen Stefanisko, Nadya I. Tarasova, Marc C. Nicklaus, Vladimir Poroikov. Computational Approaches To Identify A Hidden Pharmacological Potential In Large Chemical Libraries
0 -- 0Jun Xu 0017, Jiming Ye. Perspectives on Supercomputing and Artificial Intelligence Applications in Drug Discovery
0 -- 0Christoph Gorgulla, Konstantin Fackeldey, Gerhard Wagner, Haribabu Arthanari. Accounting of Receptor Flexibility in Ultra-Large Virtual Screens with VirtualFlow Using a Grey Wolf Optimization Method
0 -- 0Alexander V. Nemukhin, Bella L. Grigorenko, Igor V. Polyakov, Sofya V. Lushchekina. Computational Modeling of the SARS-CoV-2 Main Protease Inhibition by the Covalent Binding of Prospective Drug Molecules
0 -- 0Maria G. Khrenova, Vladimir G. Tsirelson, Alexander V. Nemukhin. Computational Characterization of the Substrate Activation in the Active Site of SARS-CoV-2 Main Protease

Volume 7, Issue 2

4 -- 23Alexey I. Dordopulo, Ilya I. Levin. Performance Reduction For Automatic Development of Parallel Applications For Reconfigurable Computer Systems
24 -- 34Karol Niedzielewski, Marcin Semeniuk, Jaroslaw Skomial, Jerzy Proficz, Piotr Sumioka, Bartosz Pliszka, Marek T. Michalewicz. Long Distance Geographically Distributed InfiniBand Based Computing
35 -- 53Julian M. Kunkel, Luciana R. Pedro. Potential of I/O Aware Workflows in Climate and Weather
54 -- 78Johannes Hofmann 0001, Christie L. Alappat, Georg Hager, Dietmar Fey, Gerhard Wellein. Bridging the Architecture Gap: Abstracting Performance-Relevant Properties of Modern Server Processors
79 -- 97Carlos Osuna, Tobias Wicky, Fabian Thuering, Torsten Hoefler, Oliver Fuhrer. Dawn: a High-level Domain-Specific Language Compiler Toolchain for Weather and Climate Applications

Volume 7, Issue 1

4 -- 36Kira Duwe, Jakob Lüttgau, Georgiana Mania, Jannek Squar, Anna Fuchs, Michael Kuhn 0003, Eugen Betke, Thomas Ludwig 0002. State of the Art and Future Trends in Data Reduction for High-Performance Computing
37 -- 54Kento Aoyama, Masanori Kakuta, Yuri Matsuzaki, Takashi Ishida, Masahito Ohue, Yutaka Akiyama. Development of Computational Pipeline Software for Genome/Exome Analysis on the K Computer
55 -- 70Oleg V. Loginovsky, Alexander L. Shestakov, Alexander A. Shinkarev. Supercomputing Technologies as Drive for Development of Enterprise Information Systems and Digital Economy
71 -- 90Mulya Agung, Muhammad Alfian Amrizal, Ryusuke Egawa, Hiroyuki Takizawa. Online MPI Process Mapping for Coordinating Locality and Memory Congestion on NUMA Systems
91 -- 111Michael Knobloch, Bernd Mohr. Tools for GPU Computing - Debugging and Performance Analysis of Heterogenous HPC Applications
112 -- 129Dylan Chapp, Victoria Stodden, Michela Taufer. Building a Vision for Reproducibility in the Cyberinfrastructure Ecosystem: Leveraging Community Efforts