Journal: IEEE/ACM Trans. Comput. Biology Bioinform.

Volume 15, Issue 6

1752 -- 1753Tianhai Tian, Jingshan Huang. Guest Editorial for Special Section on BIBM 2015
1754 -- 1764Yu-Chiao Chiu, Tzu-Hung Hsiao, Li-Ju Wang, Yidong Chen, Eric Y. Chuang. Analyzing Differential Regulatory Networks Modulated by Continuous-State Genomic Features in Glioblastoma Multiforme
1765 -- 1773Bin Hu 0001, Yongqiang Dai, Yun Su, Philip Moore, Xiaowei Zhang 0001, Chengsheng Mao, Jing Chen 0002, Lixin Xu. Feature Selection for Optimized High-Dimensional Biomedical Data Using an Improved Shuffled Frog Leaping Algorithm
1774 -- 1782Wei Lan, Jianxin Wang, Min Li 0007, Jin Liu, Fang-Xiang Wu, Yi Pan 0001. Predicting MicroRNA-Disease Associations Based on Improved MicroRNA and Disease Similarities
1783 -- 1796Tatiana Maximova, Erion Plaku, Amarda Shehu. Structure-Guided Protein Transition Modeling with a Probabilistic Roadmap Algorithm
1797 -- 1809Bo Xu 0009, Hongfei Lin, Yuan Lin 0001, Yunlong Ma, Liang Yang 0003, Jian Wang, Zhihao Yang. Improve Biomedical Information Retrieval Using Modified Learning to Rank Methods
1810 -- 1820Hongbo Zhang, Lin Zhu 0008, De-Shuang Huang. DiscMLA: An Efficient Discriminative Motif Learning Algorithm over High-Throughput Datasets
1821 -- 0Sun Kim. Editorial for Selected Papers of a Joint Conferences, Genome Informatics Workshop/International Conference on Bioinformatics (GIW/InCoB) 2015
1822 -- 1831Osamu Hirose, Shotaro Kawaguchi, Terumasa Tokunaga, Yu Toyoshima, Takayuki Teramoto, Sayuri Kuge, Takeshi Ishihara, Yuichi Iino, Ryo Yoshida. SPF-CellTracker: Tracking Multiple Cells with Strongly-Correlated Moves Using a Spatial Particle Filter
1832 -- 1843Zhanzhan Cheng, Shuigeng Zhou, Yang Wang, Hui Liu, Jihong Guan, Yi-Ping Phoebe Chen. Effectively Identifying Compound-Protein Interactions by Learning from Positive and Unlabeled Examples
1844 -- 1852Hamid D. Ismail, Hiroto Saigo, K. C. Dukka B.. RF-NR: Random Forest Based Approach for Improved Classification of Nuclear Receptors
1853 -- 1862Takeyuki Tamura, Wei Lu, Jiangning Song, Tatsuya Akutsu. Computing Minimum Reaction Modifications in a Boolean Metabolic Network
1863 -- 1864Ying Tan 0002, Yuhui Shi. Special Section on Swarm-Based Algorithms and Applications in Computational Biology and Bioinformatics
1865 -- 1876Ben Niu 0002, Jing Liu, Teresa Wu, Xianghua Chu, Zhengxu Wang, Yanmin Liu. Coevolutionary Structure-Redesigned-Based Bacterial Foraging Optimization
1877 -- 1890Biao Xu, Yong Zhang 0016, Dunwei Gong, Yi-Nan Guo, Miao Rong. Environment Sensitivity-Based Cooperative Co-Evolutionary Algorithms for Dynamic Multi-Objective Optimization
1891 -- 1903Yi-Nan Guo, Jian Cheng 0004, Sha Luo, Dunwei Gong, Yu Xue. Robust Dynamic Multi-Objective Vehicle Routing Optimization Method
1904 -- 1915Weian Guo, Chengyong Si, Yu Xue, Yanfen Mao, Lei Wang, Qidi Wu. A Grouping Particle Swarm Optimizer with Personal-Best-Position Guidance for Large Scale Optimization
1916 -- 1928Chao Gao, Mingxin Liang, Xianghua Li, Zili Zhang, Zhen Wang, Zhili Zhou. Network Community Detection Based on the Physarum-Inspired Computational Framework
1929 -- 1942Andrés Iglesias 0001, Akemi Gálvez, Andreina Avila. Immunological Approach for Full NURBS Reconstruction of Outline Curves from Noisy Data Points in Medical Imaging
1943 -- 1950Qirong Tang, Lu Ding, Fangchao Yu, Yuan Zhang, Yinghao Li, Haibo Tu. Swarm Robots Search for Multiple Targets Based on an Improved Grouping Strategy
1951 -- 1952Xin Gao 0001, Jake Y. Chen, Mohammed J. Zaki. Multiscale and Multimodal Analysis for Computational Biology
1953 -- 1959Miguel Monteiro, Ana Catarina Fonseca, Ana Teresa Freitas, Teresa Pinho e Melo, Alexandre P. Francisco, Jose M. Ferro, Arlindo L. Oliveira. Using Machine Learning to Improve the Prediction of Functional Outcome in Ischemic Stroke Patients
1960 -- 1967Annie Wang, Hansaim Lim, Shu-Yuan Cheng, Lei Xie. ANTENNA, a Multi-Rank, Multi-Layered Recommender System for Inferring Reliable Drug-Gene-Disease Associations: Repurposing Diazoxide as a Targeted Anti-Cancer Therapy
1968 -- 1978Haishuai Wang, Zhicheng Cui, Yixin Chen, Michael Avidan, Arbi Ben Abdallah, Alexander Kronzer. Predicting Hospital Readmission via Cost-Sensitive Deep Learning
1979 -- 1990Ahmed Halioui, Petko Valtchev, Abdoulaye Baniré Diallo. Bioinformatic Workflow Extraction from Scientific Texts based on Word Sense Disambiguation
1991 -- 1998Zongliang Yue, Michael T. Neylon, Thanh Nguyen 0005, Timothy Ratliff, Jake Y. Chen. "Super Gene Set" Causal Relationship Discovery from Functional Genomics Data
1999 -- 2008Meshari Alazmi, Ahmed Abbas, Xianrong Guo, Ming Fan, Lihua Li, Xin Gao 0001. 13C-detected NMR Spin System Forming and Resonance Assignment Method
2009 -- 2016Kavitha Mukund, Samuel R. Ward, Richard L. Lieber, Shankar Subramaniam. Co-Expression Network Approach to Studying the Effects of Botulinum Neurotoxin-A
2017 -- 2027Daniel P. Martins, Michael Taynnan Barros, Massimiliano Pierobon, Meenakshisundaram Kandhavelu, Pietro Lio', Sasitharan Balasubramaniam. Computational Models for Trapping Ebola Virus Using Engineered Bacteria
2028 -- 2038Juntao Li, Wenpeng Dong, Deyuan Meng. Grouped Gene Selection of Cancer via Adaptive Sparse Group Lasso Based on Conditional Mutual Information
2039 -- 2052Ho-Chun Wu, Xi-Guang Wei, Shing-Chow Chan. Novel Consensus Gene Selection Criteria for Distributed GPU Partial Least Squares-Based Gene Microarray Analysis in Diffused Large B Cell Lymphoma (DLBCL) and Related Findings
2053 -- 2059Surama Biswas, Sriyankar Acharyya. A Bi-Objective RNN Model to Reconstruct Gene Regulatory Network: A Modified Multi-Objective Simulated Annealing Approach
2060 -- 2066Warith Eddine Djeddi, Sadok Ben Yahia, Engelbert Mephu Nguifo. A Novel Computational Approach for Global Alignment for Multiple Biological Networks
2067 -- 2073Martin C. Frith, Anish Man Singh Shrestha. A Simplified Description of Child Tables for Sequence Similarity Search
2074 -- 2078Xizhe Zhang. Altering Indispensable Proteins in Controlling Directed Human Protein Interaction Network
2079 -- 2085Ting Xu, Le Ou-Yang, Xiaohua Hu, Xiao-fei Zhang. Identifying Gene Network Rewiring by Integrating Gene Expression and Gene Network Data
2086 -- 2093Hongmei Jiao, Liping Zhang, Qikun Shen, Junwu Zhu, Peng Shi. Robust Gene Circuit Control Design for Time-Delayed Genetic Regulatory Networks Without SUM Regulatory Logic
2094 -- 2100Nina Luhmann, Cédric Chauve, Jens Stoye, Roland Wittler. Scaffolding of Ancient Contigs and Ancestral Reconstruction in a Phylogenetic Framework