| 653 | -- | 654 | Pietro Hiram Guzzi, Marinka Zitnik. Editorial Deep Learning and Graph Embeddings for Network Biology |
| 655 | -- | 665 | Jin Li 0007, Jingru Wang, Hao Lv, Zhuoxuan Zhang, Zaixia Wang. IMCHGAN: Inductive Matrix Completion With Heterogeneous Graph Attention Networks for Drug-Target Interactions Prediction |
| 666 | -- | 675 | Xiaoyong Pan, Lei Chen 0007, Min Liu, Zhibin Niu, Tao Huang 0004, Yu-Dong Cai 0001. Identifying Protein Subcellular Locations With Embeddings-Based node2loc |
| 676 | -- | 687 | Kishan KC, Rui Li 0002, Feng Cui, Anne R. Haake. Predicting Biomedical Interactions With Higher-Order Graph Convolutional Networks |
| 688 | -- | 698 | Xiujuan Lei, Jiaojiao Tie, Yi Pan 0001. Inferring Metabolite-Disease Association Using Graph Convolutional Networks |
| 699 | -- | 709 | Jianliang Gao, Tengfei Lyu, Fan Xiong, Jianxin Wang 0001, Weimao Ke, Zhao Li. Predicting the Survival of Cancer Patients With Multimodal Graph Neural Network |
| 710 | -- | 717 | Giang T. T. Nguyen, Hoa D. Vu, Duc-Hau Le. Integrating Molecular Graph Data of Drugs and Multiple -Omic Data of Cell Lines for Drug Response Prediction |
| 718 | -- | 728 | Tri Minh Nguyen 0005, Thin Nguyen, Thao Minh Le, Truyen Tran 0001. GEFA: Early Fusion Approach in Drug-Target Affinity Prediction |
| 729 | -- | 740 | Ichcha Manipur, Mario Manzo, Ilaria Granata, Maurizio Giordano, Lucia Maddalena 0001, Mario R. Guarracino. Netpro2vec: A Graph Embedding Framework for Biomedical Applications |
| 741 | -- | 752 | Yuanfang Ren, Aisharjya Sarkar, Pierangelo Veltri, Ahmet Ay, Alin Dobra, Tamer Kahveci. Pattern Discovery in Multilayer Networks |
| 753 | -- | 762 | Zhen Shen, Qinhu Zhang, Kyungsook Han, De-Shuang Huang. A Deep Learning Model for RNA-Protein Binding Preference Prediction Based on Hierarchical LSTM and Attention Network |
| 763 | -- | 772 | Zhen Gao, Yu-Tian Wang, Qing-Wen Wu, Lei Li, Jian-Cheng Ni, Chun-Hou Zheng 0001. A New Method Based on Matrix Completion and Non-Negative Matrix Factorization for Predicting Disease-Associated miRNAs |
| 773 | -- | 785 | Koushik Mallick, Saurav Mallik, Sanghamitra Bandyopadhyay, Sikim Chakraborty. A Novel Graph Topology-Based GO-Similarity Measure for Signature Detection From Multi-Omics Data and its Application to Other Problems |
| 786 | -- | 794 | Xin Huang 0015, Zhenqian Liao, Bing Liu, Fengmei Tao, Benzhe Su, Xiaohui Lin. A Novel Method for Constructing Classification Models by Combining Different Biomarker Patterns |
| 795 | -- | 805 | Shi-Hao Feng, Chun-Qiu Xia, Pei-Dong Zhang, Hong-bin Shen. Ab-Initio Membrane Protein Amphipathic Helix Structure Prediction Using Deep Neural Networks |
| 806 | -- | 818 | Trinh Van Giang, Tatsuya Akutsu, Kunihiko Hiraishi. An FVS-Based Approach to Attractor Detection in Asynchronous Random Boolean Networks |
| 819 | -- | 829 | Yiding Zhang, Lyujie Chen, Shao Li. CIPHER-SC: Disease-Gene Association Inference Using Graph Convolution on a Context-Aware Network With Single-Cell Data |
| 830 | -- | 842 | Aisharjya Sarkar, Prabhat Mishra 0001, Tamer Kahveci. Data Perturbation and Recovery of Time Series Gene Expression Data |
| 843 | -- | 853 | Sachin Bhatt, Prithvi Singh, Archana Sharma, Arpita Rai, Ravins Dohare, Shweta Sankhwar, Akash Sharma, Mansoor Ali Syed. Deciphering Key Genes and miRNAs Associated With Hepatocellular Carcinoma via Network-Based Approach |
| 854 | -- | 865 | Yuting Su 0001, Yao Lu 0005, Mei Chen, An-An Liu. Deep Reinforcement Learning-Based Progressive Sequence Saliency Discovery Network for Mitosis Detection In Time-Lapse Phase-Contrast Microscopy Images |
| 866 | -- | 877 | Ben Cao, Xue Ii, Xiaokang Zhang, Bin Wang 0005, Qiang Zhang 0008, Xiaopeng Wei. Designing Uncorrelated Address Constrain for DNA Storage by DMVO Algorithm |
| 878 | -- | 887 | Boxin Guan, Yuhai Zhao, Ying Yin, Yuan Li 0008. Detecting Disease-Associated SNP-SNP Interactions Using Progressive Screening Memetic Algorithm |
| 888 | -- | 898 | Ho Bae, Seonwoo Min, Hyun Soo Choi, Sungroh Yoon. DNA Privacy: Analyzing Malicious DNA Sequences Using Deep Neural Networks |
| 899 | -- | 911 | Seonho Kim, Juntae Yoon. Dual Triggered Correspondence Topic (DTCT)model for MeSH annotation |
| 912 | -- | 926 | Christian Ponte-Fernández, Jorge González-Domínguez, Antonio Carvajal-Rodríguez, María J. Martín. Evaluation of Existing Methods for High-Order Epistasis Detection |
| 927 | -- | 939 | Tapan Chowdhury, Susanta Chakraborty, Argha Nandan. GPU Accelerated Drug Application on Signaling Pathways Containing Multiple Faults Using Boolean Networks |
| 940 | -- | 952 | Edward E. Seabolt, Gowri Nayar, Harsha Krishnareddy, Akshay Agarwal 0002, Kristen L. Beck, Ignacio Terrizzano, Eser Kandogan, Mark Kunitomi, Mary Roth, Vandana V. Mukherjee, James H. Kaufman. Functional Genomics Platform, A Cloud-Based Platform for Studying Microbial Life at Scale |
| 953 | -- | 965 | Fei Wang, Yulian Ding, Xiujuan Lei, Bo Liao, Fang-Xiang Wu. Identifying Gene Signatures for Cancer Drug Repositioning Based on Sample Clustering |
| 966 | -- | 973 | Meshari Alazmi, Olaa Motwalli. Immuno-Informatics Based Peptides: An Approach for Vaccine Development Against Outer Membrane Proteins of Pseudomonas Genus |
| 974 | -- | 988 | Khalique Newaz, Tijana Milenkovic. Inference of a Dynamic Aging-related Biological Subnetwork via Network Propagation |
| 989 | -- | 997 | Guobo Xie, Jiawei Jiang, Yuping Sun. LDA-LNSUBRW: lncRNA-Disease Association Prediction Based on Linear Neighborhood Similarity and Unbalanced bi-Random Walk |
| 998 | -- | 1008 | Lijun Quan, Xiaoyu Sun, Jian Wu, Jie Mei, Liqun Huang, Ruji He, Liangpeng Nie, Yu Chen, Qiang Lyu. Learning Useful Representations of DNA Sequences From ChIP-Seq Datasets for Exploring Transcription Factor Binding Specificities |
| 1009 | -- | 1017 | Daniele Tavernelli, Tiziana Calamoneri, Paola Vocca. Linear Time Reconciliation With Bounded Transfers of Genes |
| 1018 | -- | 1031 | Bin Wang 0041, Yongsheng Gao 0001, Xiaohui Yuan, Shengwu Xiong. Local R-Symmetry Co-Occurrence: Characterising Leaf Image Patterns for Identifying Cultivars |
| 1032 | -- | 1041 | Nikhilanand Arya, Sriparna Saha 0001. Multi-Modal Classification for Human Breast Cancer Prognosis Prediction: Proposal of Deep-Learning Based Stacked Ensemble Model |
| 1042 | -- | 1049 | Haonan Feng, Ruiqing Zheng, Jianxin Wang 0001, Fang-Xiang Wu, Min Li 0007. NIMCE: A Gene Regulatory Network Inference Approach Based on Multi Time Delays Causal Entropy |
| 1050 | -- | 1063 | Liliana Ironi, Ettore Lanzarone. Optimal Robust Search for Parameter Values of Qualitative Models of Gene Regulatory Networks |
| 1064 | -- | 1074 | Hua Zhang, Guogen Shan, Bailin Yang. Optimized Elastic Network Models With Direct Characterization of Inter-Residue Cooperativity for Protein Dynamics |
| 1075 | -- | 1083 | Xian-gan Chen, Shuai Liu, Wen Zhang 0008. Predicting Coding Potential of RNA Sequences by Solving Local Data Imbalance |
| 1084 | -- | 1095 | Jianhong Cheng, Jin Liu 0012, Hailin Yue, Harrison Bai, Yi Pan 0001, Jianxin Wang 0001. Prediction of Glioma Grade Using Intratumoral and Peritumoral Radiomic Features From Multiparametric MRI Images |
| 1096 | -- | 1104 | Nishtha Hooda, Ruchika Gupta, Nidhi Rani Gupta. Prediction of Malignant Breast Cancer Cases Using Ensemble Machine Learning: A Case Study of Pesticides Prone Area |
| 1105 | -- | 1116 | Shweta Yadav, Srivatsa Ramesh Jayashree, Sriparna Saha 0001, Asif Ekbal. Relation Extraction From Biomedical and Clinical Text: Unified Multitask Learning Framework |
| 1117 | -- | 1129 | Subin Qian, Huiyi Liu, Xiaofeng Yuan, Wei Wei, Shuangshuang Chen, Hong Yan 0001. Row and Column Structure-Based Biclustering for Gene Expression Data |
| 1130 | -- | 1143 | Ekta Shah, Pradipta Maji. Scalable Non-Linear Graph Fusion for Prioritizing Cancer-Causing Genes |
| 1144 | -- | 1153 | Zhijie Ni, Xiaoying Zheng, Xiao Zheng, Xiufen Zou. scLRTD : A Novel Low Rank Tensor Decomposition Method for Imputing Missing Values in Single-Cell Multi-Omics Sequencing Data |
| 1154 | -- | 1164 | Chuan-Yuan Wang, Ying-Lian Gao, Jin-Xing Liu, Xiang-Zhen Kong, Chun-Hou Zheng 0001. Single-Cell RNA Sequencing Data Clustering by Low-Rank Subspace Ensemble Framework |
| 1165 | -- | 1172 | Jason L. Causey, Keyu Li, Xianghao Chen, Wei Dong, Karl Walker, Jake A. Qualls, Jonathan Stubblefield, Jason H. Moore, Yuanfang Guan, Xiuzhen Huang. Spatial Pyramid Pooling With 3D Convolution Improves Lung Cancer Detection |
| 1173 | -- | 1192 | Andri Mirzal. Statistical Analysis of Microarray Data Clustering using NMF, Spectral Clustering, Kmeans, and GMM |
| 1193 | -- | 1202 | Cheng Liu 0001, Wenming Cao 0002, Si Wu 0002, Wenjun Shen, Dazhi Jiang, Zhiwen Yu 0002, Hau-San Wong. Supervised Graph Clustering for Cancer Subtyping Based on Survival Analysis and Integration of Multi-Omic Tumor Data |
| 1203 | -- | 1213 | Mohan Timilsina, Declan Patrick Mc Kernan, Haixuan Yang, Mathieu d'Aquin. Synergy Between Embedding and Protein Functional Association Networks for Drug Label Prediction Using Harmonic Function |
| 1214 | -- | 1224 | Michail Tsagris, Zacharias Papadovasilakis, Kleanthi Lakiotaki, Ioannis Tsamardinos. The $\gamma$γ-OMP Algorithm for Feature Selection With Application to Gene Expression Data |
| 1225 | -- | 1234 | Imran Razzak, Saeeda Naz. Unit-Vise: Deep Shallow Unit-Vise Residual Neural Networks With Transition Layer For Expert Level Skin Cancer Classification |
| 1235 | -- | 1244 | Trinh-Trung-Duong Nguyen, Quang-Thai Ho, Nguyen-Quoc-Khanh Le, Van-Dinh Phan, Yu-Yen Ou. Use Chou's 5-Steps Rule With Different Word Embedding Types to Boost Performance of Electron Transport Protein Prediction Model |
| 1245 | -- | 1254 | Gilberto Medeiros Nakamura, Alinne Crintinne Corrêa Souza, Francisco Carlos M. Souza, Renato F. Bulcão-Neto, Alexandre Souto Martinez, Alessandra A. Macedo. Using Symmetry to Enhance the Performance of Agent-Based Epidemic Models |