Journal: IEEE/ACM Trans. Comput. Biology Bioinform.

Volume 21, Issue 1

1 -- 13Yamane El-Zein, Mathieu Lemay, Kévin Huguenin. PrivaTree: Collaborative Privacy-Preserving Training of Decision Trees on Biomedical Data
14 -- 25Chao Tu, Denghui Du, Tieyong Zeng, Yu Zhang 0064. Deep Multi-Dictionary Learning for Survival Prediction With Multi-Zoom Histopathological Whole Slide Images
26 -- 35Jordan Morris, Ashur Rafiev, Graeme M. Bragg, Mark L. Vousden, David B. Thomas, Alex Yakovlev, Andrew D. Brown. An Event-Driven Approach to Genotype Imputation on a Custom RISC-V Cluster
36 -- 44Souradipto Choudhuri, Keya Sau. CodonU: A Python Package for Codon Usage Analysis
45 -- 56Shengpeng Yu, Hong Wang 0015, Jing Li, Jun Zhao, Cheng Liang, Yanshen Sun. A Multi-Relational Graph Encoder Network for Fine-Grained Prediction of MiRNA-Disease Associations
57 -- 68Rui Guo, Xu Tian, Hanhe Lin, Stephen J. McKenna, Hong-Dong Li, Fei Guo 0001, Jin Liu 0012. Graph-Based Fusion of Imaging, Genetic and Clinical Data for Degenerative Disease Diagnosis
69 -- 83Jonas Kristiansen Nøland, Steinar Thorvaldsen. The Exact Stochastic Process of the Haploid Multi-Allelic Wright-Fisher Mutation Model
84 -- 94Wenliang Tang, Zhaohong Deng, Hanwen Zhou, Wei Zhang, Fuping Hu, Kup-Sze Choi, Shitong Wang 0001. MVDINET: A Novel Multi-Level Enzyme Function Predictor With Multi-View Deep Interactive Learning
95 -- 105Shujie Dong, Yuansheng Liu, Yongshun Gong, Xiangjun Dong 0001, Xiangxiang Zeng. scCAN: Clustering With Adaptive Neighbor-Based Imputation Method for Single-Cell RNA-Seq Data
106 -- 119Nicolò Rossi, Nicola Gigante, Nicola Vitacolonna, Carla Piazza. Inferring Markov Chains to Describe Convergent Tumor Evolution With CIMICE
120 -- 128Dandan Li, Zhen Xiao, Han Sun, Xingpeng Jiang, Weizhong Zhao, Xianjun Shen. Prediction of Drug-Disease Associations Based on Multi-Kernel Deep Learning Method in Heterogeneous Graph Embedding
129 -- 142Changyong Yu, Yuhai Zhao, Chu Zhao, Jianyu Jin, Keming Mao, Guoren Wang. MiniDBG: A Novel and Minimal De Bruijn Graph for Read Mapping
143 -- 154Wei Wang 0166, MengXue Yu, Bin Sun, Juntao Li, Dong Liu 0008, Hongjun Zhang, Xianfang Wang, Yun Zhou. SMGCN: Multiple Similarity and Multiple Kernel Fusion Based Graph Convolutional Neural Network for Drug-Target Interactions Prediction
155 -- 168Rituparna Sinha, Rajat Kumar Pal, Rajat K. De. ENLIGHTENMENT: A Scalable Annotated Database of Genomics and NGS-Based Nucleotide Level Profiles
169 -- 177Eric J. Barnett, Daniel G. Onete, Asif Salekin, Stephen V. Faraone. Genomic Machine Learning Meta-regression: Insights on Associations of Study Features With Reported Model Performance
178 -- 187Yuerui Liu, Yongquan Jiang, Fan Zhang, Yan Yang 0001. A Novel Multi-Scale Graph Neural Network for Metabolic Pathway Prediction
188 -- 199Junchang Xin, Mingcan Wang, Luxuan Qu, Qi Chen, Weiyiqi Wang, Zhiqiong Wang. BIC-LP: A Hybrid Higher-Order Dynamic Bayesian Network Score Function for Gene Regulatory Network Reconstruction
200 -- 207Pengcheng Zeng, Zhixiang Lin. scICML: Information-Theoretic Co-Clustering-Based Multi-View Learning for the Integrative Analysis of Single-Cell Multi-Omics Data
208 -- 214Bindi M. Nagda, Van Minh Nguyen, Ryan T. White. promSEMBLE: Hard Pattern Mining and Ensemble Learning for Detecting DNA Promoter Sequences